RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 GOLIM4O00461 696 aa18.62■□□□□ 0.57
CCDC90B-213ENST00000529611 ZNF589Q86UQ0 364 aaPredicted RBP18.62■□□□□ 0.57
CCDC90B-213ENST00000529611 AMIGO3Q86WK7 504 aa18.62■□□□□ 0.57
CCDC90B-213ENST00000529611 RTL9Q8NET4 1388 aa18.62■□□□□ 0.57
CCDC90B-213ENST00000529611 SPEF2Q9C093 1822 aa18.62■□□□□ 0.57
CCDC90B-213ENST00000529611 FRAT2O75474 233 aaPredicted RBP18.62■□□□□ 0.57
CCDC90B-213ENST00000529611 CCDC152Q4G0S7 254 aa18.62■□□□□ 0.57
CCDC90B-213ENST00000529611 CCDC158Q5M9N0 1113 aa18.62■□□□□ 0.57
CCDC90B-213ENST00000529611 USPL1Q5W0Q7 1092 aa18.62■□□□□ 0.57
CCDC90B-213ENST00000529611 MAP4K1Q92918 833 aa18.62■□□□□ 0.57
CCDC90B-213ENST00000529611 SEC31BQ9NQW1 1179 aa18.62■□□□□ 0.57
CCDC90B-213ENST00000529611 FOXD4L1Q9NU39 408 aa18.62■□□□□ 0.57
CCDC90B-213ENST00000529611 SRP68Q9UHB9 627 aaKnown RBP18.62■□□□□ 0.57
CCDC90B-213ENST00000529611 RTCBQ9Y3I0 505 aaKnown RBP18.62■□□□□ 0.57
CCDC90B-213ENST00000529611 CHGBP05060 677 aa18.61■□□□□ 0.57
CCDC90B-213ENST00000529611 GORABQ5T7V8 394 aa18.61■□□□□ 0.57
CCDC90B-213ENST00000529611 TBC1D9BQ66K14 1250 aa18.61■□□□□ 0.57
CCDC90B-213ENST00000529611 UPF3BQ9BZI7 483 aaKnown RBP18.61■□□□□ 0.57
CCDC90B-213ENST00000529611 C4BP0C0L5 1744 aa18.61■□□□□ 0.57
CCDC90B-213ENST00000529611 PDE8BO95263 885 aa18.61■□□□□ 0.57
CCDC90B-213ENST00000529611 NECTIN1Q15223 517 aa18.61■□□□□ 0.57
CCDC90B-213ENST00000529611 TTC39AQ5SRH9 613 aa18.61■□□□□ 0.57
CCDC90B-213ENST00000529611 KCNB2Q92953 911 aa18.61■□□□□ 0.57
CCDC90B-213ENST00000529611 CIZ1Q9ULV3 898 aaPredicted RBP18.61■□□□□ 0.57
CCDC90B-213ENST00000529611 ABCC12Q96J65 1359 aa18.61■□□□□ 0.57
CCDC90B-213ENST00000529611 BRWD3Q6RI45 1802 aa18.6■□□□□ 0.57
CCDC90B-213ENST00000529611 MROH5Q6ZUA9 1318 aa18.6■□□□□ 0.57
CCDC90B-213ENST00000529611 ERFEQ4G0M1 354 aa18.6■□□□□ 0.57
CCDC90B-213ENST00000529611 PRPF40BQ6NWY9 871 aaKnown RBP18.6■□□□□ 0.57
CCDC90B-213ENST00000529611 TICAM2Q86XR7 235 aa18.6■□□□□ 0.57
CCDC90B-213ENST00000529611 RBM8AQ9Y5S9 174 aaKnown RBP18.6■□□□□ 0.57
CCDC90B-213ENST00000529611 MCM2P49736 904 aa18.59■□□□□ 0.57
CCDC90B-213ENST00000529611 BICDL1Q6ZP65 573 aa18.59■□□□□ 0.57
CCDC90B-213ENST00000529611 LRRC4BQ9NT99 713 aa18.59■□□□□ 0.57
CCDC90B-213ENST00000529611 ZPR1O75312 459 aa18.59■□□□□ 0.57
CCDC90B-213ENST00000529611 TAF5LO75529 589 aa18.59■□□□□ 0.57
CCDC90B-213ENST00000529611 SCARF1Q14162 830 aa18.59■□□□□ 0.57
CCDC90B-213ENST00000529611 KRT27Q7Z3Y8 459 aa18.59■□□□□ 0.57
CCDC90B-213ENST00000529611 IL27Q8NEV9 243 aa18.59■□□□□ 0.57
CCDC90B-213ENST00000529611 ARHGEF1Q92888 912 aaKnown RBP18.59■□□□□ 0.57
CCDC90B-213ENST00000529611 COL24A1Q17RW2 1714 aa18.58■□□□□ 0.57
CCDC90B-213ENST00000529611 FAM196AQ6ZSG2 479 aa18.58■□□□□ 0.56
CCDC90B-213ENST00000529611 SEC62Q99442 399 aaKnown RBP18.58■□□□□ 0.56
CCDC90B-213ENST00000529611 MPHOSPH8Q99549 860 aa18.58■□□□□ 0.56
CCDC90B-213ENST00000529611 FGFR2P21802 821 aa18.57■□□□□ 0.56
CCDC90B-213ENST00000529611 MCMDC2Q4G0Z9 681 aa18.57■□□□□ 0.56
CCDC90B-213ENST00000529611 C4AP0C0L4 1744 aa18.57■□□□□ 0.56
CCDC90B-213ENST00000529611 FKBP4Q02790 459 aaKnown RBP eCLIP18.57■□□□□ 0.56
CCDC90B-213ENST00000529611 PUM3Q15397 648 aaKnown RBP18.57■□□□□ 0.56
CCDC90B-213ENST00000529611 CREB3L3Q68CJ9 461 aa18.57■□□□□ 0.56
CCDC90B-213ENST00000529611 C3orf67Q6ZVT6 689 aa18.57■□□□□ 0.56
CCDC90B-213ENST00000529611 HELBQ8NG08 1087 aaPredicted RBP18.57■□□□□ 0.56
CCDC90B-213ENST00000529611 TMX3Q96JJ7 454 aa18.57■□□□□ 0.56
CCDC90B-213ENST00000529611 COL4A1P02462 1669 aa18.57■□□□□ 0.56
CCDC90B-213ENST00000529611 KCNJ4P48050 445 aa18.56■□□□□ 0.56
CCDC90B-213ENST00000529611 SF3B3Q15393 1217 aaKnown RBP18.56■□□□□ 0.56
CCDC90B-213ENST00000529611 CCDC129Q6ZRS4 1044 aa18.56■□□□□ 0.56
CCDC90B-213ENST00000529611 LPIN2Q92539 896 aa18.56■□□□□ 0.56
CCDC90B-213ENST00000529611 ZNF512BQ96KM6 892 aaPredicted RBP18.56■□□□□ 0.56
CCDC90B-213ENST00000529611 TTC14Q96N46 770 aa18.56■□□□□ 0.56
CCDC90B-213ENST00000529611 SETDB2Q96T68 719 aa18.56■□□□□ 0.56
CCDC90B-213ENST00000529611 ARAP2Q8WZ64 1704 aa18.56■□□□□ 0.56
CCDC90B-213ENST00000529611 SLC27A2O14975 620 aa18.55■□□□□ 0.56
CCDC90B-213ENST00000529611 IGHMBP2P38935 993 aaKnown RBP18.55■□□□□ 0.56
CCDC90B-213ENST00000529611 ADCK5Q3MIX3 580 aa18.55■□□□□ 0.56
CCDC90B-213ENST00000529611 SLFNL1Q499Z3 407 aa18.55■□□□□ 0.56
CCDC90B-213ENST00000529611 SLC10A5Q5PT55 438 aa18.55■□□□□ 0.56
CCDC90B-213ENST00000529611 ZMYM1Q5SVZ6 1142 aa18.55■□□□□ 0.56
CCDC90B-213ENST00000529611 AKAP11Q9UKA4 1901 aa18.55■□□□□ 0.56
CCDC90B-213ENST00000529611 CASZ1Q86V15 1759 aa18.55■□□□□ 0.56
CCDC90B-213ENST00000529611 ZKSCAN1P17029 563 aaPredicted RBP18.55■□□□□ 0.56
CCDC90B-213ENST00000529611 MCAMP43121 646 aa18.55■□□□□ 0.56
CCDC90B-213ENST00000529611 ZAP70P43403 619 aa18.55■□□□□ 0.56
CCDC90B-213ENST00000529611 PI16Q6UXB8 463 aa18.55■□□□□ 0.56
CCDC90B-213ENST00000529611 TM6SF1Q9BZW5 370 aa18.55■□□□□ 0.56
CCDC90B-213ENST00000529611 NYXQ9GZU5 481 aa18.55■□□□□ 0.56
CCDC90B-213ENST00000529611 HELLSQ9NRZ9 838 aa18.55■□□□□ 0.56
CCDC90B-213ENST00000529611 RNF113AO15541 343 aaKnown RBP18.54■□□□□ 0.56
CCDC90B-213ENST00000529611 PHF14O94880 888 aa18.54■□□□□ 0.56
CCDC90B-213ENST00000529611 CASTP20810 708 aaKnown RBP18.54■□□□□ 0.56
CCDC90B-213ENST00000529611 SSFA2P28290 1259 aa18.53■□□□□ 0.56
CCDC90B-213ENST00000529611 GTF2E1P29083 439 aaPredicted RBP18.53■□□□□ 0.56
CCDC90B-213ENST00000529611 RAB3GAP1Q15042 981 aa18.53■□□□□ 0.56
CCDC90B-213ENST00000529611 TRAPPC3LQ5T215 181 aa18.53■□□□□ 0.56
CCDC90B-213ENST00000529611 CCDC102BQ68D86 513 aa18.53■□□□□ 0.56
CCDC90B-213ENST00000529611 NOL8Q76FK4 1167 aaKnown RBP18.53■□□□□ 0.56
CCDC90B-213ENST00000529611 ZGPATQ8N5A5 531 aaKnown RBP18.53■□□□□ 0.56
CCDC90B-213ENST00000529611 JAKMIP1Q96N16 626 aaKnown RBP18.53■□□□□ 0.56
CCDC90B-213ENST00000529611 CDC5LQ99459 802 aaKnown RBP18.53■□□□□ 0.56
CCDC90B-213ENST00000529611 TRIM37O94972 964 aa18.53■□□□□ 0.56
CCDC90B-213ENST00000529611 RFC4P35249 363 aa18.53■□□□□ 0.56
CCDC90B-213ENST00000529611 PHKA1P46020 1223 aa18.53■□□□□ 0.56
CCDC90B-213ENST00000529611 CUL4AQ13619 759 aa18.53■□□□□ 0.56
CCDC90B-213ENST00000529611 RNF20Q5VTR2 975 aa18.53■□□□□ 0.56
CCDC90B-213ENST00000529611 NBPF5PQ86XG9 351 aaPredicted RBP18.53■□□□□ 0.56
CCDC90B-213ENST00000529611 ZSWIM6Q9HCJ5 1215 aa18.53■□□□□ 0.56
CCDC90B-213ENST00000529611 SNAP23O00161 211 aa18.52■□□□□ 0.56
CCDC90B-213ENST00000529611 SLC5A1P13866 664 aa18.52■□□□□ 0.56
CCDC90B-213ENST00000529611 CPA1P15085 419 aa18.52■□□□□ 0.56
CCDC90B-213ENST00000529611 ARID4AP29374 1257 aaPredicted RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms