RNA–Protein interactions for RNA: ENST00000529167.5

C11orf88-203, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C11orf88, Length 3,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-203ENST00000529167 EXOC6BQ9Y2D4 811 aa9.4□□□□□ -0.9
C11orf88-203ENST00000529167 CORO7P57737 925 aa9.4□□□□□ -0.91
C11orf88-203ENST00000529167 ARMCX6Q7L4S7 300 aa9.4□□□□□ -0.91
C11orf88-203ENST00000529167 SPC24Q8NBT2 197 aa9.4□□□□□ -0.91
C11orf88-203ENST00000529167 NGDNQ8NEJ9 315 aaKnown RBP9.4□□□□□ -0.91
C11orf88-203ENST00000529167 NECTIN2Q92692 538 aa9.4□□□□□ -0.91
C11orf88-203ENST00000529167 INTS4Q96HW7 963 aaKnown RBP9.4□□□□□ -0.91
C11orf88-203ENST00000529167 AK7Q96M32 723 aa9.4□□□□□ -0.91
C11orf88-203ENST00000529167 LNPKQ9C0E8 428 aa9.4□□□□□ -0.91
C11orf88-203ENST00000529167 ZSCAN16Q9H4T2 348 aaPredicted RBP9.4□□□□□ -0.91
C11orf88-203ENST00000529167 ARHGEF28Q8N1W1 1705 aaKnown RBP9.39□□□□□ -0.91
C11orf88-203ENST00000529167 IPO8O15397 1037 aaKnown RBP9.39□□□□□ -0.91
C11orf88-203ENST00000529167 CCDC93Q567U6 631 aa9.39□□□□□ -0.91
C11orf88-203ENST00000529167 CCDC186Q7Z3E2 898 aa9.39□□□□□ -0.91
C11orf88-203ENST00000529167 CDCA7Q9BWT1 371 aaPredicted RBP9.39□□□□□ -0.91
C11orf88-203ENST00000529167 RPS6KL1Q9Y6S9 549 aa9.39□□□□□ -0.91
C11orf88-203ENST00000529167 EIF3CLB5ME19 914 aaKnown RBP9.39□□□□□ -0.91
C11orf88-203ENST00000529167 C21orf2O43822 256 aa9.39□□□□□ -0.91
C11orf88-203ENST00000529167 GRIN3BO60391 1043 aa9.39□□□□□ -0.91
C11orf88-203ENST00000529167 DDB1Q16531 1140 aa9.39□□□□□ -0.91
C11orf88-203ENST00000529167 SLC16A10Q8TF71 515 aa9.39□□□□□ -0.91
C11orf88-203ENST00000529167 GCC1Q96CN9 775 aa9.39□□□□□ -0.91
C11orf88-203ENST00000529167 EIF3CQ99613 913 aaKnown RBP9.39□□□□□ -0.91
C11orf88-203ENST00000529167 SLIT3O75094 1523 aa9.38□□□□□ -0.91
C11orf88-203ENST00000529167 KIF2AO00139 706 aaPredicted RBP9.38□□□□□ -0.91
C11orf88-203ENST00000529167 LRMPQ12912 555 aa9.38□□□□□ -0.91
C11orf88-203ENST00000529167 BIRC2Q13490 618 aa9.38□□□□□ -0.91
C11orf88-203ENST00000529167 E2F4Q16254 413 aa9.38□□□□□ -0.91
C11orf88-203ENST00000529167 MAP9Q49MG5 647 aa9.38□□□□□ -0.91
C11orf88-203ENST00000529167 MARCH10Q8NA82 808 aaPredicted RBP9.38□□□□□ -0.91
C11orf88-203ENST00000529167 RBM5P52756 815 aaKnown RBP eCLIP9.38□□□□□ -0.91
C11orf88-203ENST00000529167 CCT2P78371 535 aaKnown RBP9.38□□□□□ -0.91
C11orf88-203ENST00000529167 CFAP70Q5T0N1 1121 aa9.38□□□□□ -0.91
C11orf88-203ENST00000529167 PLA2G4DQ86XP0 818 aa9.38□□□□□ -0.91
C11orf88-203ENST00000529167 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.38□□□□□ -0.91
C11orf88-203ENST00000529167 ANKRD33BA6NCL7 494 aa9.37□□□□□ -0.91
C11orf88-203ENST00000529167 MCM2P49736 904 aa9.37□□□□□ -0.91
C11orf88-203ENST00000529167 PTPN14Q15678 1187 aa9.37□□□□□ -0.91
C11orf88-203ENST00000529167 RPAP1Q9BWH6 1393 aaPredicted RBP9.37□□□□□ -0.91
C11orf88-203ENST00000529167 NEMFO60524 1076 aa9.37□□□□□ -0.91
C11orf88-203ENST00000529167 TRIM27P14373 513 aa9.37□□□□□ -0.91
C11orf88-203ENST00000529167 INHBEP58166 350 aa9.37□□□□□ -0.91
C11orf88-203ENST00000529167 UBE2HP62256 183 aa9.37□□□□□ -0.91
C11orf88-203ENST00000529167 ADAM21Q9UKJ8 722 aa9.37□□□□□ -0.91
C11orf88-203ENST00000529167 TCHHQ07283 1943 aa9.37□□□□□ -0.91
C11orf88-203ENST00000529167 POLR3GO15318 223 aaPredicted RBP9.37□□□□□ -0.91
C11orf88-203ENST00000529167 SGSM2O43147 1006 aa9.37□□□□□ -0.91
C11orf88-203ENST00000529167 SMARCA5O60264 1052 aaPredicted RBP9.37□□□□□ -0.91
C11orf88-203ENST00000529167 SSR1P43307 286 aaKnown RBP9.37□□□□□ -0.91
C11orf88-203ENST00000529167 SAFB2Q14151 953 aaKnown RBP eCLIP9.37□□□□□ -0.91
C11orf88-203ENST00000529167 ARGLU1Q9NWB6 273 aaPredicted RBP9.37□□□□□ -0.91
C11orf88-203ENST00000529167 ERCC6LQ2NKX8 1250 aa9.36□□□□□ -0.91
C11orf88-203ENST00000529167 TMCO3Q6UWJ1 677 aa9.36□□□□□ -0.91
C11orf88-203ENST00000529167 FILIP1Q7Z7B0 1213 aa9.36□□□□□ -0.91
C11orf88-203ENST00000529167 EFCAB13Q8IY85 973 aa9.36□□□□□ -0.91
C11orf88-203ENST00000529167 ITFG2Q969R8 447 aa9.36□□□□□ -0.91
C11orf88-203ENST00000529167 OAS2P29728 719 aaKnown RBP9.36□□□□□ -0.91
C11orf88-203ENST00000529167 CDC25BP30305 580 aa9.36□□□□□ -0.91
C11orf88-203ENST00000529167 C1QTNF12Q5T7M4 302 aa9.36□□□□□ -0.91
C11orf88-203ENST00000529167 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.36□□□□□ -0.91
C11orf88-203ENST00000529167 FAM200AQ8TCP9 573 aa9.36□□□□□ -0.91
C11orf88-203ENST00000529167 CACTINQ8WUQ7 758 aaKnown RBP9.36□□□□□ -0.91
C11orf88-203ENST00000529167 STAG1Q8WVM7 1258 aa9.36□□□□□ -0.91
C11orf88-203ENST00000529167 BCL2L13Q9BXK5 485 aa9.36□□□□□ -0.91
C11orf88-203ENST00000529167 A1CFQ9NQ94 594 aaKnown RBP9.36□□□□□ -0.91
C11orf88-203ENST00000529167 CEP350Q5VT06 3117 aa9.36□□□□□ -0.91
C11orf88-203ENST00000529167 TUBGCP6Q96RT7 1819 aa9.36□□□□□ -0.91
C11orf88-203ENST00000529167 ABCC6O95255 1503 aa9.36□□□□□ -0.91
C11orf88-203ENST00000529167 U2SURPO15042 1029 aaKnown RBP9.35□□□□□ -0.91
C11orf88-203ENST00000529167 TUBB4AP04350 444 aa9.35□□□□□ -0.91
C11orf88-203ENST00000529167 FOXD4L6Q3SYB3 417 aaPredicted RBP9.35□□□□□ -0.91
C11orf88-203ENST00000529167 NUTM2GQ5VZR2 741 aa9.35□□□□□ -0.91
C11orf88-203ENST00000529167 FOXD4L3Q6VB84 417 aaPredicted RBP9.35□□□□□ -0.91
C11orf88-203ENST00000529167 ATF7IPQ6VMQ6 1270 aa9.35□□□□□ -0.91
C11orf88-203ENST00000529167 DNAJC5GQ8N7S2 189 aa9.35□□□□□ -0.91
C11orf88-203ENST00000529167 MKRN1Q9UHC7 482 aaKnown RBP9.35□□□□□ -0.91
C11orf88-203ENST00000529167 MPHOSPH10O00566 681 aaKnown RBP9.35□□□□□ -0.91
C11orf88-203ENST00000529167 SLC34A2O95436 690 aa9.35□□□□□ -0.91
C11orf88-203ENST00000529167 YBX3P16989 372 aaKnown RBP eCLIP9.35□□□□□ -0.91
C11orf88-203ENST00000529167 MTA1Q13330 715 aa9.35□□□□□ -0.91
C11orf88-203ENST00000529167 RINLQ6ZS11 566 aa9.35□□□□□ -0.91
C11orf88-203ENST00000529167 TMX3Q96JJ7 454 aa9.35□□□□□ -0.91
C11orf88-203ENST00000529167 PLEKHG3A1L390 1219 aa9.35□□□□□ -0.91
C11orf88-203ENST00000529167 TBC1D8O95759 1140 aa9.35□□□□□ -0.91
C11orf88-203ENST00000529167 APLP1P51693 650 aa9.35□□□□□ -0.91
C11orf88-203ENST00000529167 SMC1AQ14683 1233 aaKnown RBP9.35□□□□□ -0.91
C11orf88-203ENST00000529167 ZCCHC17Q9NP64 241 aaKnown RBP9.35□□□□□ -0.91
C11orf88-203ENST00000529167 NRBP1Q9UHY1 535 aa9.35□□□□□ -0.91
C11orf88-203ENST00000529167 TNS2Q63HR2 1409 aa9.35□□□□□ -0.91
C11orf88-203ENST00000529167 BTAF1O14981 1849 aa9.34□□□□□ -0.91
C11orf88-203ENST00000529167 LIG1P18858 919 aa9.34□□□□□ -0.91
C11orf88-203ENST00000529167 HOXD11P31277 338 aaPredicted RBP9.34□□□□□ -0.91
C11orf88-203ENST00000529167 PRELPP51888 382 aa9.34□□□□□ -0.91
C11orf88-203ENST00000529167 ANKRD23Q86SG2 305 aa9.34□□□□□ -0.91
C11orf88-203ENST00000529167 LRRC8AQ8IWT6 810 aa9.34□□□□□ -0.91
C11orf88-203ENST00000529167 GPBP1L1Q9HC44 474 aaPredicted RBP9.34□□□□□ -0.91
C11orf88-203ENST00000529167 ORC3Q9UBD5 711 aaPredicted RBP9.34□□□□□ -0.91
C11orf88-203ENST00000529167 MINK1Q8N4C8 1332 aaPredicted RBP9.34□□□□□ -0.91
C11orf88-203ENST00000529167 GCP02774 474 aa9.34□□□□□ -0.91
C11orf88-203ENST00000529167 CCDC192P0DO97 292 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms