RNA–Protein interactions for RNA: ENST00000528669.5

TM9SF1-206, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5 BASIC

Gene TM9SF1, Length 2,425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-206ENST00000528669 NBPF15Q8N660 670 aa22.31■■□□□ 1.16
TM9SF1-206ENST00000528669 TNMDQ9H2S6 317 aa22.31■■□□□ 1.16
TM9SF1-206ENST00000528669 TIMM10P62072 90 aa22.3■■□□□ 1.16
TM9SF1-206ENST00000528669 KBTBD3Q8NAB2 608 aa22.3■■□□□ 1.16
TM9SF1-206ENST00000528669 FGD1P98174 961 aa22.3■■□□□ 1.16
TM9SF1-206ENST00000528669 TTLL7Q6ZT98 887 aa22.3■■□□□ 1.16
TM9SF1-206ENST00000528669 FOSBP53539 338 aa22.29■■□□□ 1.16
TM9SF1-206ENST00000528669 SCRN1Q12765 414 aa22.29■■□□□ 1.16
TM9SF1-206ENST00000528669 LUZP1Q86V48 1076 aa22.29■■□□□ 1.16
TM9SF1-206ENST00000528669 FAM200AQ8TCP9 573 aa22.29■■□□□ 1.16
TM9SF1-206ENST00000528669 RFX7Q2KHR2 1363 aa22.29■■□□□ 1.16
TM9SF1-206ENST00000528669 H3BQV1 296 aa22.29■■□□□ 1.16
TM9SF1-206ENST00000528669 IFFO2Q5TF58 517 aa22.29■■□□□ 1.16
TM9SF1-206ENST00000528669 KLHL34Q8N239 644 aa22.29■■□□□ 1.16
TM9SF1-206ENST00000528669 PGBD1Q96JS3 809 aa22.29■■□□□ 1.16
TM9SF1-206ENST00000528669 RESTQ13127 1097 aa22.28■■□□□ 1.16
TM9SF1-206ENST00000528669 GLIPR1L2Q4G1C9 344 aa22.28■■□□□ 1.16
TM9SF1-206ENST00000528669 ATG9AQ7Z3C6 839 aa22.28■■□□□ 1.16
TM9SF1-206ENST00000528669 BICD2Q8TD16 824 aa22.28■■□□□ 1.16
TM9SF1-206ENST00000528669 NR1I2O75469 434 aa22.28■■□□□ 1.16
TM9SF1-206ENST00000528669 KCNF1Q9H3M0 494 aa22.28■■□□□ 1.16
TM9SF1-206ENST00000528669 A0A0G2JLW4 131 aa22.27■■□□□ 1.16
TM9SF1-206ENST00000528669 H7C1W4 665 aa22.27■■□□□ 1.16
TM9SF1-206ENST00000528669 ZNF594Q96JF6 807 aaPredicted RBP22.27■■□□□ 1.16
TM9SF1-206ENST00000528669 PAG1Q9NWQ8 432 aa22.27■■□□□ 1.16
TM9SF1-206ENST00000528669 CEBPZQ03701 1054 aaKnown RBP22.27■■□□□ 1.16
TM9SF1-206ENST00000528669 ANO6Q4KMQ2 910 aa22.27■■□□□ 1.16
TM9SF1-206ENST00000528669 GLI3P10071 1580 aa22.26■■□□□ 1.15
TM9SF1-206ENST00000528669 LAMA4Q16363 1823 aa22.26■■□□□ 1.15
TM9SF1-206ENST00000528669 DYNC1I1O14576 645 aa22.26■■□□□ 1.15
TM9SF1-206ENST00000528669 SH3TC1Q8TE82 1336 aa22.26■■□□□ 1.15
TM9SF1-206ENST00000528669 TMEM94Q12767 1356 aa22.26■■□□□ 1.15
TM9SF1-206ENST00000528669 A1BGP04217 495 aa22.26■■□□□ 1.15
TM9SF1-206ENST00000528669 LRRC24Q50LG9 513 aa22.26■■□□□ 1.15
TM9SF1-206ENST00000528669 PKD1L3Q7Z443 1732 aa22.26■■□□□ 1.15
TM9SF1-206ENST00000528669 ZBTB3Q9H5J0 574 aa22.26■■□□□ 1.15
TM9SF1-206ENST00000528669 DDX19AQ9NUU7 478 aaKnown RBP22.26■■□□□ 1.15
TM9SF1-206ENST00000528669 PPFIA3O75145 1194 aa22.25■■□□□ 1.15
TM9SF1-206ENST00000528669 APOBRQ0VD83 1088 aa22.25■■□□□ 1.15
TM9SF1-206ENST00000528669 CLSTN2Q9H4D0 955 aa22.25■■□□□ 1.15
TM9SF1-206ENST00000528669 CBX8Q9HC52 389 aa22.25■■□□□ 1.15
TM9SF1-206ENST00000528669 CWC25Q9NXE8 425 aaPredicted RBP22.25■■□□□ 1.15
TM9SF1-206ENST00000528669 PYCARDQ9ULZ3 195 aa22.25■■□□□ 1.15
TM9SF1-206ENST00000528669 LAMB4A4D0S4 1761 aa22.24■■□□□ 1.15
TM9SF1-206ENST00000528669 PALLDQ8WX93 1383 aa22.24■■□□□ 1.15
TM9SF1-206ENST00000528669 CCT2P78371 535 aaKnown RBP22.23■■□□□ 1.15
TM9SF1-206ENST00000528669 DHX32Q7L7V1 743 aaKnown RBP22.23■■□□□ 1.15
TM9SF1-206ENST00000528669 NAP1L2Q9ULW6 460 aaPredicted RBP22.23■■□□□ 1.15
TM9SF1-206ENST00000528669 SPTLC3Q9NUV7 552 aa22.23■■□□□ 1.15
TM9SF1-206ENST00000528669 PFKFB2O60825 505 aa22.22■■□□□ 1.15
TM9SF1-206ENST00000528669 CTDNEP1O95476 244 aa22.22■■□□□ 1.15
TM9SF1-206ENST00000528669 CHST3Q7LGC8 479 aa22.22■■□□□ 1.15
TM9SF1-206ENST00000528669 NSUN7Q8NE18 718 aaKnown RBP22.22■■□□□ 1.15
TM9SF1-206ENST00000528669 SMARCC2Q8TAQ2 1214 aa22.22■■□□□ 1.15
TM9SF1-206ENST00000528669 FTOQ9C0B1 505 aaKnown RBP eCLIP22.22■■□□□ 1.156e-6■□□□□ 9
TM9SF1-206ENST00000528669 HELLSQ9NRZ9 838 aa22.22■■□□□ 1.15
TM9SF1-206ENST00000528669 ABCC6O95255 1503 aa22.22■■□□□ 1.15
TM9SF1-206ENST00000528669 TNS3Q68CZ2 1445 aa22.22■■□□□ 1.15
TM9SF1-206ENST00000528669 IL15P40933 162 aaPredicted RBP22.21■■□□□ 1.15
TM9SF1-206ENST00000528669 RBM43Q6ZSC3 357 aaKnown RBP22.21■■□□□ 1.15
TM9SF1-206ENST00000528669 MYRIPQ8NFW9 859 aa22.21■■□□□ 1.15
TM9SF1-206ENST00000528669 PUS3Q9BZE2 481 aaKnown RBP22.21■■□□□ 1.15
TM9SF1-206ENST00000528669 ZSCAN16Q9H4T2 348 aaPredicted RBP22.21■■□□□ 1.15
TM9SF1-206ENST00000528669 NCOA5Q9HCD5 579 aaKnown RBP22.21■■□□□ 1.15
TM9SF1-206ENST00000528669 PTPDC1A2A3K4 754 aa22.21■■□□□ 1.15
TM9SF1-206ENST00000528669 HMGB1P09429 215 aaKnown RBP22.21■■□□□ 1.15
TM9SF1-206ENST00000528669 IFIT1P09914 478 aaKnown RBP22.21■■□□□ 1.15
TM9SF1-206ENST00000528669 HSPD1P10809 573 aaKnown RBP22.21■■□□□ 1.15
TM9SF1-206ENST00000528669 ZMYM1Q5SVZ6 1142 aa22.21■■□□□ 1.15
TM9SF1-206ENST00000528669 KIAA1524Q8TCG1 905 aa22.21■■□□□ 1.15
TM9SF1-206ENST00000528669 TSC1Q92574 1164 aa22.21■■□□□ 1.15
TM9SF1-206ENST00000528669 DSCC1Q9BVC3 393 aa22.21■■□□□ 1.15
TM9SF1-206ENST00000528669 A0A1B0GUL7 405 aa22.2■■□□□ 1.14
TM9SF1-206ENST00000528669 PTGS1P23219 599 aa22.2■■□□□ 1.14
TM9SF1-206ENST00000528669 DNAJC25Q9H1X3 360 aa22.2■■□□□ 1.14
TM9SF1-206ENST00000528669 MAST3O60307 1309 aa22.2■■□□□ 1.14
TM9SF1-206ENST00000528669 GOLGA6L6A8MZA4 724 aa22.2■■□□□ 1.14
TM9SF1-206ENST00000528669 E7EWF7 191 aa22.2■■□□□ 1.14
TM9SF1-206ENST00000528669 EYA2O00167 538 aa22.2■■□□□ 1.14
TM9SF1-206ENST00000528669 CFAP45Q9UL16 551 aa22.2■■□□□ 1.14
TM9SF1-206ENST00000528669 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.19■■□□□ 1.14
TM9SF1-206ENST00000528669 EXOSC10Q01780 885 aaKnown RBP22.19■■□□□ 1.14
TM9SF1-206ENST00000528669 ARID3AQ99856 593 aa22.19■■□□□ 1.14
TM9SF1-206ENST00000528669 LLPHQ9BRT6 129 aaKnown RBP22.19■■□□□ 1.14
TM9SF1-206ENST00000528669 TJP1Q07157 1748 aa22.19■■□□□ 1.14
TM9SF1-206ENST00000528669 ADD1P35611 737 aaKnown RBP22.19■■□□□ 1.14
TM9SF1-206ENST00000528669 TTLL5Q6EMB2 1281 aa22.19■■□□□ 1.14
TM9SF1-206ENST00000528669 VSIG10Q8N0Z9 540 aa22.19■■□□□ 1.14
TM9SF1-206ENST00000528669 GPR108Q9NPR9 543 aa22.19■■□□□ 1.14
TM9SF1-206ENST00000528669 SPATA31A3Q5VYP0 1347 aa22.19■■□□□ 1.14
TM9SF1-206ENST00000528669 M0R2C6 588 aa22.18■■□□□ 1.14
TM9SF1-206ENST00000528669 GUCY1B3Q02153 619 aa22.18■■□□□ 1.14
TM9SF1-206ENST00000528669 NUP188Q5SRE5 1749 aa22.18■■□□□ 1.14
TM9SF1-206ENST00000528669 TPM3P06753 285 aa22.18■■□□□ 1.14
TM9SF1-206ENST00000528669 ZCRB1Q8TBF4 217 aaKnown RBP22.18■■□□□ 1.14
TM9SF1-206ENST00000528669 PRIMPOLQ96LW4 560 aa22.18■■□□□ 1.14
TM9SF1-206ENST00000528669 RNF113AO15541 343 aaKnown RBP22.17■■□□□ 1.14
TM9SF1-206ENST00000528669 ZNF165P49910 485 aa22.17■■□□□ 1.14
TM9SF1-206ENST00000528669 FKBP4Q02790 459 aaKnown RBP eCLIP22.17■■□□□ 1.14
TM9SF1-206ENST00000528669 TOM1L2Q6ZVM7 507 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms