RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 WDR78Q5VTH9 848 aa9.72□□□□□ -0.85
CTNND1-219ENST00000528621 TBC1D5Q92609 795 aa9.72□□□□□ -0.85
CTNND1-219ENST00000528621 SETDB2Q96T68 719 aa9.72□□□□□ -0.85
CTNND1-219ENST00000528621 ADGBQ8N7X0 1667 aa9.72□□□□□ -0.85
CTNND1-219ENST00000528621 SDSP20132 328 aa9.72□□□□□ -0.85
CTNND1-219ENST00000528621 CTNNA2P26232 953 aa9.72□□□□□ -0.85
CTNND1-219ENST00000528621 UBA7P41226 1012 aa9.72□□□□□ -0.85
CTNND1-219ENST00000528621 SMC1AQ14683 1233 aaKnown RBP9.72□□□□□ -0.85
CTNND1-219ENST00000528621 CHRNA2Q15822 529 aa9.72□□□□□ -0.85
CTNND1-219ENST00000528621 JARID2Q92833 1246 aaPredicted RBP9.72□□□□□ -0.85
CTNND1-219ENST00000528621 SAMM50Q9Y512 469 aa9.72□□□□□ -0.85
CTNND1-219ENST00000528621 PLXNC1O60486 1568 aa9.72□□□□□ -0.85
CTNND1-219ENST00000528621 GSTTP1A0A1W2PQM5 241 aa9.72□□□□□ -0.85
CTNND1-219ENST00000528621 PRC1O43663 620 aa9.72□□□□□ -0.85
CTNND1-219ENST00000528621 STAMBPO95630 424 aa9.72□□□□□ -0.85
CTNND1-219ENST00000528621 PDE1AP54750 535 aa9.72□□□□□ -0.85
CTNND1-219ENST00000528621 RTN1Q16799 776 aa9.72□□□□□ -0.85
CTNND1-219ENST00000528621 RAB11FIP4Q86YS3 637 aa9.72□□□□□ -0.85
CTNND1-219ENST00000528621 BICD1Q96G01 975 aa9.72□□□□□ -0.85
CTNND1-219ENST00000528621 TFIP11Q9UBB9 837 aaKnown RBP9.72□□□□□ -0.85
CTNND1-219ENST00000528621 SNW1Q13573 536 aaKnown RBP9.71□□□□□ -0.85
CTNND1-219ENST00000528621 HOOK3Q86VS8 718 aa9.71□□□□□ -0.85
CTNND1-219ENST00000528621 TMX3Q96JJ7 454 aa9.71□□□□□ -0.85
CTNND1-219ENST00000528621 MAGEB6P1A0A0J9YX57 407 aa9.71□□□□□ -0.85
CTNND1-219ENST00000528621 STAT6P42226 847 aa9.71□□□□□ -0.85
CTNND1-219ENST00000528621 TCERG1LQ5VWI1 586 aa9.71□□□□□ -0.85
CTNND1-219ENST00000528621 RRAGBQ5VZM2 374 aa9.71□□□□□ -0.85
CTNND1-219ENST00000528621 GIGYF2Q6Y7W6 1299 aaKnown RBP9.71□□□□□ -0.85
CTNND1-219ENST00000528621 PRIMPOLQ96LW4 560 aa9.71□□□□□ -0.85
CTNND1-219ENST00000528621 PLCG2P16885 1265 aa9.71□□□□□ -0.86
CTNND1-219ENST00000528621 SYKP43405 635 aa9.71□□□□□ -0.86
CTNND1-219ENST00000528621 ATP2B3Q16720 1220 aa9.71□□□□□ -0.86
CTNND1-219ENST00000528621 Q6ZUG5 572 aa9.71□□□□□ -0.86
CTNND1-219ENST00000528621 ALG1Q9BT22 464 aa9.71□□□□□ -0.86
CTNND1-219ENST00000528621 TRMT1Q9NXH9 659 aaKnown RBP9.71□□□□□ -0.86
CTNND1-219ENST00000528621 BCCIPQ9P287 314 aaKnown RBP eCLIP9.71□□□□□ -0.861e-6■■■■□ 21.2
CTNND1-219ENST00000528621 PRPHP41219 470 aa9.71□□□□□ -0.86
CTNND1-219ENST00000528621 TRIM47Q96LD4 638 aa9.71□□□□□ -0.86
CTNND1-219ENST00000528621 TMCO5BA8MYB1 307 aa9.71□□□□□ -0.86
CTNND1-219ENST00000528621 DNA2P51530 1060 aa9.71□□□□□ -0.86
CTNND1-219ENST00000528621 TUBB4BP68371 445 aa9.71□□□□□ -0.86
CTNND1-219ENST00000528621 ANKRD2Q9GZV1 360 aa9.71□□□□□ -0.86
CTNND1-219ENST00000528621 GDPD2Q9HCC8 539 aa9.71□□□□□ -0.86
CTNND1-219ENST00000528621 ATL3Q6DD88 541 aa9.7□□□□□ -0.86
CTNND1-219ENST00000528621 HEATR3Q7Z4Q2 680 aa9.7□□□□□ -0.86
CTNND1-219ENST00000528621 RNF113AO15541 343 aaKnown RBP9.7□□□□□ -0.86
CTNND1-219ENST00000528621 EIF4A2Q14240 407 aaKnown RBP9.7□□□□□ -0.86
CTNND1-219ENST00000528621 CEP135Q66GS9 1140 aa9.7□□□□□ -0.86
CTNND1-219ENST00000528621 RBM28Q9NW13 759 aaKnown RBP9.7□□□□□ -0.86
CTNND1-219ENST00000528621 PAG1Q9NWQ8 432 aa9.7□□□□□ -0.86
CTNND1-219ENST00000528621 RBM8AQ9Y5S9 174 aaKnown RBP9.7□□□□□ -0.86
CTNND1-219ENST00000528621 IDEP14735 1019 aa9.7□□□□□ -0.86
CTNND1-219ENST00000528621 CCDC97Q96F63 343 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-219ENST00000528621 MEIS3Q99687 375 aa9.7□□□□□ -0.86
CTNND1-219ENST00000528621 INSRP06213 1382 aa9.7□□□□□ -0.86
CTNND1-219ENST00000528621 PCDH11XQ9BZA7 1347 aa9.7□□□□□ -0.86
CTNND1-219ENST00000528621 PCDH11YQ9BZA8 1340 aa9.7□□□□□ -0.86
CTNND1-219ENST00000528621 NMIQ13287 307 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-219ENST00000528621 PLVAPQ9BX97 442 aa9.7□□□□□ -0.86
CTNND1-219ENST00000528621 NAA16Q6N069 864 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-219ENST00000528621 MRPS27Q92552 414 aaKnown RBP9.69□□□□□ -0.86
CTNND1-219ENST00000528621 CALML3P27482 149 aa9.69□□□□□ -0.86
CTNND1-219ENST00000528621 CYLC1P35663 651 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-219ENST00000528621 ZNF165P49910 485 aa9.69□□□□□ -0.86
CTNND1-219ENST00000528621 CCDC174Q6PII3 467 aa9.69□□□□□ -0.86
CTNND1-219ENST00000528621 COPS6Q7L5N1 327 aa9.69□□□□□ -0.86
CTNND1-219ENST00000528621 BBXQ8WY36 941 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-219ENST00000528621 BRF1Q92994 677 aa9.69□□□□□ -0.86
CTNND1-219ENST00000528621 ACSBG1Q96GR2 724 aa9.69□□□□□ -0.86
CTNND1-219ENST00000528621 DRC1Q96MC2 740 aa9.69□□□□□ -0.86
CTNND1-219ENST00000528621 ABCC2Q92887 1545 aa9.69□□□□□ -0.86
CTNND1-219ENST00000528621 LRRC45Q96CN5 670 aa9.69□□□□□ -0.86
CTNND1-219ENST00000528621 HELLSQ9NRZ9 838 aa9.69□□□□□ -0.86
CTNND1-219ENST00000528621 COL17A1Q9UMD9 1497 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-219ENST00000528621 KRT2P35908 639 aa9.69□□□□□ -0.86
CTNND1-219ENST00000528621 ISM2Q6H9L7 571 aa9.69□□□□□ -0.86
CTNND1-219ENST00000528621 PAXIP1Q6ZW49 1069 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-219ENST00000528621 C16orf45Q96MC5 204 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-219ENST00000528621 C6orf50Q9HD87 102 aa9.69□□□□□ -0.86
CTNND1-219ENST00000528621 CNPY2Q9Y2B0 182 aa9.69□□□□□ -0.86
CTNND1-219ENST00000528621 AOX1Q06278 1338 aa9.69□□□□□ -0.86
CTNND1-219ENST00000528621 PTPRKQ15262 1439 aa9.69□□□□□ -0.86
CTNND1-219ENST00000528621 B4DLN1 442 aa9.69□□□□□ -0.86
CTNND1-219ENST00000528621 MRPL12P52815 198 aaKnown RBP9.69□□□□□ -0.86
CTNND1-219ENST00000528621 NECAB1Q8N987 351 aa9.69□□□□□ -0.86
CTNND1-219ENST00000528621 NPC1L1Q9UHC9 1359 aa9.69□□□□□ -0.86
CTNND1-219ENST00000528621 ADGRL2O95490 1459 aa9.68□□□□□ -0.86
CTNND1-219ENST00000528621 F13A1P00488 732 aa9.68□□□□□ -0.86
CTNND1-219ENST00000528621 IL2RBP14784 551 aa9.68□□□□□ -0.86
CTNND1-219ENST00000528621 CTR9Q6PD62 1173 aa9.68□□□□□ -0.86
CTNND1-219ENST00000528621 PANK2Q9BZ23 570 aa9.68□□□□□ -0.86
CTNND1-219ENST00000528621 PUF60Q9UHX1 559 aaKnown RBP9.68□□□□□ -0.86
CTNND1-219ENST00000528621 ANXA1P04083 346 aa9.68□□□□□ -0.86
CTNND1-219ENST00000528621 NOP2P46087 812 aaKnown RBP9.68□□□□□ -0.86
CTNND1-219ENST00000528621 FMNL3Q8IVF7 1028 aa9.68□□□□□ -0.86
CTNND1-219ENST00000528621 ZMYM4Q5VZL5 1548 aa9.68□□□□□ -0.86
CTNND1-219ENST00000528621 BICDL2A1A5D9 508 aa9.68□□□□□ -0.86
CTNND1-219ENST00000528621 MTHFSDQ2M296 383 aaKnown RBP9.68□□□□□ -0.86
CTNND1-219ENST00000528621 BRAPQ7Z569 592 aa9.68□□□□□ -0.86
CTNND1-219ENST00000528621 LINS1Q8NG48 757 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms