RNA–Protein interactions for RNA: ENST00000528414.5

PTPN22-207, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-207ENST00000528414 U2AF1Q01081 240 aaKnown RBP eCLIP4.55□□□□□ -1.68
PTPN22-207ENST00000528414 XPCQ01831 940 aaPredicted RBP4.55□□□□□ -1.68
PTPN22-207ENST00000528414 PTK7Q13308 1070 aa4.55□□□□□ -1.68
PTPN22-207ENST00000528414 ZSCAN30Q86W11 494 aa4.55□□□□□ -1.68
PTPN22-207ENST00000528414 RRAGDQ9NQL2 400 aaPredicted RBP4.55□□□□□ -1.68
PTPN22-207ENST00000528414 COL1A1P02452 1464 aaPredicted RBP4.54□□□□□ -1.68
PTPN22-207ENST00000528414 IPO5O00410 1097 aaKnown RBP4.54□□□□□ -1.68
PTPN22-207ENST00000528414 MPHOSPH10O00566 681 aaKnown RBP4.54□□□□□ -1.68
PTPN22-207ENST00000528414 ATG7O95352 703 aa4.54□□□□□ -1.68
PTPN22-207ENST00000528414 LDHCP07864 332 aa4.54□□□□□ -1.68
PTPN22-207ENST00000528414 C7P10643 843 aa4.54□□□□□ -1.68
PTPN22-207ENST00000528414 PSMC1P62191 440 aaKnown RBP4.54□□□□□ -1.68
PTPN22-207ENST00000528414 SRPK2P78362 688 aaKnown RBP4.54□□□□□ -1.68
PTPN22-207ENST00000528414 C11orf91Q3C1V1 193 aa4.54□□□□□ -1.68
PTPN22-207ENST00000528414 DDX27Q96GQ7 796 aaKnown RBP4.54□□□□□ -1.68
PTPN22-207ENST00000528414 CHST12Q9NRB3 414 aa4.54□□□□□ -1.68
PTPN22-207ENST00000528414 ZNF236Q9UL36 1845 aa4.54□□□□□ -1.68
PTPN22-207ENST00000528414 FAM83GA6ND36 823 aa4.54□□□□□ -1.68
PTPN22-207ENST00000528414 RECKO95980 971 aa4.54□□□□□ -1.68
PTPN22-207ENST00000528414 TRPC1P48995 793 aa4.54□□□□□ -1.68
PTPN22-207ENST00000528414 PSMD2Q13200 908 aa4.54□□□□□ -1.68
PTPN22-207ENST00000528414 SIM2Q14190 667 aaPredicted RBP4.54□□□□□ -1.68
PTPN22-207ENST00000528414 DUSP9Q99956 384 aaKnown RBP4.54□□□□□ -1.68
PTPN22-207ENST00000528414 SAGE1Q9NXZ1 904 aa4.54□□□□□ -1.68
PTPN22-207ENST00000528414 CCDC88AQ3V6T2 1871 aa4.54□□□□□ -1.68
PTPN22-207ENST00000528414 A0A1W2PP64 1363 aa4.54□□□□□ -1.68
PTPN22-207ENST00000528414 HSP90AB2PQ58FF8 381 aa4.53□□□□□ -1.68
PTPN22-207ENST00000528414 MEX3CQ5U5Q3 659 aaKnown RBP4.53□□□□□ -1.68
PTPN22-207ENST00000528414 CDC5LQ99459 802 aaKnown RBP4.53□□□□□ -1.68
PTPN22-207ENST00000528414 ALDH8A1Q9H2A2 487 aaPredicted RBP4.53□□□□□ -1.68
PTPN22-207ENST00000528414 SFMBT1Q9UHJ3 866 aa4.53□□□□□ -1.68
PTPN22-207ENST00000528414 ZNF232Q9UNY5 417 aa4.53□□□□□ -1.68
PTPN22-207ENST00000528414 FMNL3Q8IVF7 1028 aa4.53□□□□□ -1.68
PTPN22-207ENST00000528414 TAF4BQ92750 862 aa4.53□□□□□ -1.68
PTPN22-207ENST00000528414 SPC25Q9HBM1 224 aa4.53□□□□□ -1.68
PTPN22-207ENST00000528414 CTAGE5O15320 804 aa4.53□□□□□ -1.68
PTPN22-207ENST00000528414 CCDC144BQ3MJ40 725 aa4.53□□□□□ -1.68
PTPN22-207ENST00000528414 ANKRD13BQ86YJ7 626 aa4.53□□□□□ -1.68
PTPN22-207ENST00000528414 PLPP6Q8IY26 295 aa4.53□□□□□ -1.68
PTPN22-207ENST00000528414 IQSEC3Q9UPP2 1182 aaPredicted RBP4.53□□□□□ -1.68
PTPN22-207ENST00000528414 PES1O00541 588 aaKnown RBP4.52□□□□□ -1.69
PTPN22-207ENST00000528414 MTA2O94776 668 aa4.52□□□□□ -1.69
PTPN22-207ENST00000528414 LETM1O95202 739 aaPredicted RBP4.52□□□□□ -1.69
PTPN22-207ENST00000528414 RRM1P23921 792 aa4.52□□□□□ -1.69
PTPN22-207ENST00000528414 ABCD1P33897 745 aa4.52□□□□□ -1.69
PTPN22-207ENST00000528414 TAGLNQ01995 201 aaKnown RBP4.52□□□□□ -1.69
PTPN22-207ENST00000528414 DHX8Q14562 1220 aaKnown RBP4.52□□□□□ -1.69
PTPN22-207ENST00000528414 KCTD2Q14681 263 aa4.52□□□□□ -1.69
PTPN22-207ENST00000528414 TSNAXIP1Q2TAA8 658 aa4.52□□□□□ -1.69
PTPN22-207ENST00000528414 ALDH1L2Q3SY69 923 aa4.52□□□□□ -1.69
PTPN22-207ENST00000528414 DIEXFQ68CQ4 756 aaKnown RBP4.52□□□□□ -1.69
PTPN22-207ENST00000528414 MIER1Q8N108 512 aa4.52□□□□□ -1.69
PTPN22-207ENST00000528414 AKAP2Q9Y2D5 859 aa4.52□□□□□ -1.69
PTPN22-207ENST00000528414 CLK1P49759 484 aaKnown RBP4.52□□□□□ -1.69
PTPN22-207ENST00000528414 CCDC15Q0P6D6 951 aa4.52□□□□□ -1.69
PTPN22-207ENST00000528414 KRT77Q7Z794 578 aa4.52□□□□□ -1.69
PTPN22-207ENST00000528414 PDILTQ8N807 584 aa4.52□□□□□ -1.69
PTPN22-207ENST00000528414 PHC3Q8NDX5 983 aa4.52□□□□□ -1.69
PTPN22-207ENST00000528414 AGAP3Q96P47 875 aa4.52□□□□□ -1.69
PTPN22-207ENST00000528414 PAIP2Q9BPZ3 127 aaKnown RBP4.52□□□□□ -1.69
PTPN22-207ENST00000528414 CASS4Q9NQ75 786 aa4.52□□□□□ -1.69
PTPN22-207ENST00000528414 KCNA2P16389 499 aa4.52□□□□□ -1.69
PTPN22-207ENST00000528414 CD53P19397 219 aa4.52□□□□□ -1.69
PTPN22-207ENST00000528414 C16orf87Q6PH81 154 aa4.52□□□□□ -1.69
PTPN22-207ENST00000528414 CLASRPQ8N2M8 674 aaKnown RBP4.52□□□□□ -1.69
PTPN22-207ENST00000528414 DHX38Q92620 1227 aaKnown RBP4.52□□□□□ -1.69
PTPN22-207ENST00000528414 LARP6Q9BRS8 491 aaKnown RBP4.52□□□□□ -1.69
PTPN22-207ENST00000528414 TMA7Q9Y2S6 64 aaKnown RBP4.52□□□□□ -1.69
PTPN22-207ENST00000528414 DDX60LQ5H9U9 1706 aaKnown RBP4.52□□□□□ -1.69
PTPN22-207ENST00000528414 TAF1P21675 1872 aa4.51□□□□□ -1.69
PTPN22-207ENST00000528414 YY1P25490 414 aa4.51□□□□□ -1.69
PTPN22-207ENST00000528414 ABL2P42684 1182 aa4.51□□□□□ -1.69
PTPN22-207ENST00000528414 NAP1L1P55209 391 aaKnown RBP4.51□□□□□ -1.69
PTPN22-207ENST00000528414 HSCBQ8IWL3 235 aa4.51□□□□□ -1.69
PTPN22-207ENST00000528414 ZNF396Q96N95 335 aaPredicted RBP4.51□□□□□ -1.69
PTPN22-207ENST00000528414 TMEM63CQ9P1W3 806 aa4.51□□□□□ -1.69
PTPN22-207ENST00000528414 PLEKHH1Q9ULM0 1364 aa4.51□□□□□ -1.69
PTPN22-207ENST00000528414 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.51□□□□□ -1.69
PTPN22-207ENST00000528414 TRIM64CA6NLI5 447 aa4.51□□□□□ -1.69
PTPN22-207ENST00000528414 BOLA2-SMG1P6H3BVE0 249 aa4.51□□□□□ -1.69
PTPN22-207ENST00000528414 HIP1RO75146 1068 aa4.51□□□□□ -1.69
PTPN22-207ENST00000528414 CC2D1AQ6P1N0 951 aaPredicted RBP4.51□□□□□ -1.69
PTPN22-207ENST00000528414 TCP11L2Q8N4U5 519 aa4.51□□□□□ -1.69
PTPN22-207ENST00000528414 VPS33BQ9H267 617 aa4.51□□□□□ -1.69
PTPN22-207ENST00000528414 ISY1Q9ULR0 285 aaKnown RBP4.51□□□□□ -1.69
PTPN22-207ENST00000528414 GJA3Q9Y6H8 435 aa4.51□□□□□ -1.69
PTPN22-207ENST00000528414 ERICH4A6NGS2 130 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 ZNF853P0CG23 659 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 BMS1Q14692 1282 aaKnown RBP4.5□□□□□ -1.69
PTPN22-207ENST00000528414 GJC2Q5T442 439 aaPredicted RBP4.5□□□□□ -1.69
PTPN22-207ENST00000528414 GPR153Q6NV75 609 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 CDC37L1Q7L3B6 337 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 RAVER1Q8IY67 606 aaKnown RBP4.5□□□□□ -1.69
PTPN22-207ENST00000528414 KIAA1958Q8N8K9 716 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 GTPBP4Q9BZE4 634 aaKnown RBP4.5□□□□□ -1.69
PTPN22-207ENST00000528414 COG6Q9Y2V7 657 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 PRR36Q9H6K5 1346 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 KIF3CO14782 793 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 TGFB2P61812 414 aa4.5□□□□□ -1.69
PTPN22-207ENST00000528414 UBE4AQ14139 1066 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms