RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 YDJCA8MPS7 323 aa12.92□□□□□ -0.34
CAPN1-210ENST00000527699 HIRAP54198 1017 aaPredicted RBP12.92□□□□□ -0.34
CAPN1-210ENST00000527699 LMOD3Q0VAK6 560 aa12.92□□□□□ -0.34
CAPN1-210ENST00000527699 GRAPQ13588 217 aa12.92□□□□□ -0.34
CAPN1-210ENST00000527699 DOK7Q18PE1 504 aa12.92□□□□□ -0.34
CAPN1-210ENST00000527699 HDGFL1Q5TGJ6 251 aa12.92□□□□□ -0.34
CAPN1-210ENST00000527699 KRT26Q7Z3Y9 468 aa12.92□□□□□ -0.34
CAPN1-210ENST00000527699 GRAPLQ8TC17 118 aaPredicted RBP12.92□□□□□ -0.34
CAPN1-210ENST00000527699 CELF1Q92879 486 aaKnown RBP12.92□□□□□ -0.34
CAPN1-210ENST00000527699 TMEM106CQ9BVX2 250 aa12.92□□□□□ -0.34
CAPN1-210ENST00000527699 DBNDD1Q9H9R9 158 aa12.92□□□□□ -0.34
CAPN1-210ENST00000527699 TRIM35Q9UPQ4 493 aa12.92□□□□□ -0.34
CAPN1-210ENST00000527699 LAMB2P55268 1798 aa12.92□□□□□ -0.34
CAPN1-210ENST00000527699 SH3TC1Q8TE82 1336 aa12.91□□□□□ -0.34
CAPN1-210ENST00000527699 POLR2AP24928 1970 aaKnown RBP12.91□□□□□ -0.34
CAPN1-210ENST00000527699 C6orf229H3BNL8 230 aa12.91□□□□□ -0.34
CAPN1-210ENST00000527699 ELL2O00472 640 aaPredicted RBP12.91□□□□□ -0.34
CAPN1-210ENST00000527699 BBOX1O75936 387 aa12.91□□□□□ -0.34
CAPN1-210ENST00000527699 WDR43Q15061 677 aaKnown RBP eCLIP12.91□□□□□ -0.34
CAPN1-210ENST00000527699 GRIPAP1Q4V328 841 aa12.91□□□□□ -0.34
CAPN1-210ENST00000527699 HSP90AB3PQ58FF7 597 aa12.91□□□□□ -0.34
CAPN1-210ENST00000527699 RASAL3Q86YV0 1011 aa12.91□□□□□ -0.34
CAPN1-210ENST00000527699 RTFDC1Q9BY42 306 aaPredicted RBP12.91□□□□□ -0.34
CAPN1-210ENST00000527699 KCNQ5Q9NR82 932 aa12.91□□□□□ -0.34
CAPN1-210ENST00000527699 CNOT7Q9UIV1 285 aaKnown RBP12.91□□□□□ -0.34
CAPN1-210ENST00000527699 CHL1O00533 1208 aa12.9□□□□□ -0.34
CAPN1-210ENST00000527699 GPSM2P81274 684 aa12.9□□□□□ -0.34
CAPN1-210ENST00000527699 KIAA2012Q0VF49 1180 aa12.9□□□□□ -0.34
CAPN1-210ENST00000527699 TNIP1Q15025 636 aa12.9□□□□□ -0.34
CAPN1-210ENST00000527699 RALBP1Q15311 655 aa12.9□□□□□ -0.34
CAPN1-210ENST00000527699 TBC1D10BQ4KMP7 808 aaPredicted RBP12.9□□□□□ -0.34
CAPN1-210ENST00000527699 SAMD7Q7Z3H4 446 aa12.9□□□□□ -0.34
CAPN1-210ENST00000527699 CCDC85AQ96PX6 553 aaPredicted RBP12.9□□□□□ -0.34
CAPN1-210ENST00000527699 PRDM6Q9NQX0 595 aa12.9□□□□□ -0.34
CAPN1-210ENST00000527699 NSFL1CQ9UNZ2 370 aaKnown RBP12.9□□□□□ -0.34
CAPN1-210ENST00000527699 ADAMTS8Q9UP79 889 aa12.9□□□□□ -0.34
CAPN1-210ENST00000527699 COL4A1P02462 1669 aa12.89□□□□□ -0.35
CAPN1-210ENST00000527699 ADM5C9JUS6 153 aa12.89□□□□□ -0.35
CAPN1-210ENST00000527699 H7C1D1 291 aa12.89□□□□□ -0.35
CAPN1-210ENST00000527699 PSMD14O00487 310 aa12.89□□□□□ -0.35
CAPN1-210ENST00000527699 ANKRD13DQ6ZTN6 518 aa12.89□□□□□ -0.35
CAPN1-210ENST00000527699 MICALL2Q8IY33 904 aa12.89□□□□□ -0.35
CAPN1-210ENST00000527699 PLBD2Q8NHP8 589 aa12.89□□□□□ -0.35
CAPN1-210ENST00000527699 DPF3Q92784 378 aa12.89□□□□□ -0.35
CAPN1-210ENST00000527699 RUNDC1Q96C34 613 aa12.89□□□□□ -0.35
CAPN1-210ENST00000527699 EGFRP00533 1210 aa12.88□□□□□ -0.35
CAPN1-210ENST00000527699 WASHC4Q2M389 1173 aa12.88□□□□□ -0.35
CAPN1-210ENST00000527699 DUSP27Q5VZP5 1158 aa12.88□□□□□ -0.35
CAPN1-210ENST00000527699 DCPSQ96C86 337 aaKnown RBP12.88□□□□□ -0.35
CAPN1-210ENST00000527699 LRCH3Q96II8 777 aa12.88□□□□□ -0.35
CAPN1-210ENST00000527699 PHAXQ9H814 394 aaKnown RBP12.88□□□□□ -0.35
CAPN1-210ENST00000527699 POLLQ9UGP5 575 aa12.88□□□□□ -0.35
CAPN1-210ENST00000527699 ANKRD36CQ5JPF3 1778 aa12.88□□□□□ -0.35
CAPN1-210ENST00000527699 MYBBP1AQ9BQG0 1328 aaKnown RBP12.88□□□□□ -0.35
CAPN1-210ENST00000527699 IRS4O14654 1257 aaPredicted RBP12.87□□□□□ -0.35
CAPN1-210ENST00000527699 COL9A1P20849 921 aa12.87□□□□□ -0.35
CAPN1-210ENST00000527699 SLC4A8Q2Y0W8 1093 aa12.87□□□□□ -0.35
CAPN1-210ENST00000527699 VPS33BQ9H267 617 aa12.87□□□□□ -0.35
CAPN1-210ENST00000527699 SEC31BQ9NQW1 1179 aa12.87□□□□□ -0.35
CAPN1-210ENST00000527699 BABAM1Q9NWV8 329 aa12.87□□□□□ -0.35
CAPN1-210ENST00000527699 DUOX1Q9NRD9 1551 aa12.86□□□□□ -0.35
CAPN1-210ENST00000527699 CENPFP49454 3210 aa12.86□□□□□ -0.35
CAPN1-210ENST00000527699 RANBP2P49792 3224 aaKnown RBP12.86□□□□□ -0.35
CAPN1-210ENST00000527699 ECE2O60344 883 aa12.86□□□□□ -0.35
CAPN1-210ENST00000527699 RIC3Q7Z5B4 369 aa12.86□□□□□ -0.35
CAPN1-210ENST00000527699 MYD88Q99836 296 aa12.86□□□□□ -0.35
CAPN1-210ENST00000527699 ISCA1Q9BUE6 129 aa12.86□□□□□ -0.35
CAPN1-210ENST00000527699 MBIPQ9NS73 344 aa12.86□□□□□ -0.35
CAPN1-210ENST00000527699 ASTN2O75129 1339 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-210ENST00000527699 UNC80Q8N2C7 3258 aa12.85□□□□□ -0.35
CAPN1-210ENST00000527699 G3V3G9 751 aa12.85□□□□□ -0.35
CAPN1-210ENST00000527699 SOX1O00570 391 aaPredicted RBP12.85□□□□□ -0.35
CAPN1-210ENST00000527699 MKRN3Q13064 507 aaKnown RBP12.85□□□□□ -0.35
CAPN1-210ENST00000527699 NOM1Q5C9Z4 860 aaKnown RBP12.85□□□□□ -0.35
CAPN1-210ENST00000527699 DCAF8Q5TAQ9 597 aa12.85□□□□□ -0.35
CAPN1-210ENST00000527699 OTOP1Q7RTM1 612 aa12.85□□□□□ -0.35
CAPN1-210ENST00000527699 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.85□□□□□ -0.35
CAPN1-210ENST00000527699 DBF4Q9UBU7 674 aaPredicted RBP12.85□□□□□ -0.35
CAPN1-210ENST00000527699 SCAF8Q9UPN6 1271 aaKnown RBP12.85□□□□□ -0.35
CAPN1-210ENST00000527699 CDHR2Q9BYE9 1310 aa12.85□□□□□ -0.35
CAPN1-210ENST00000527699 DDX60Q8IY21 1712 aaKnown RBP12.85□□□□□ -0.35
CAPN1-210ENST00000527699 MYCP01106 439 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-210ENST00000527699 TBC1D16Q8TBP0 767 aa12.84□□□□□ -0.35
CAPN1-210ENST00000527699 BRCA2P51587 3418 aa12.84□□□□□ -0.35
CAPN1-210ENST00000527699 APAF1O14727 1248 aa12.83□□□□□ -0.36
CAPN1-210ENST00000527699 UFL1O94874 794 aa12.83□□□□□ -0.36
CAPN1-210ENST00000527699 GOLGA2Q08379 1002 aa12.83□□□□□ -0.36
CAPN1-210ENST00000527699 SF3B3Q15393 1217 aaKnown RBP12.83□□□□□ -0.36
CAPN1-210ENST00000527699 SULF1Q8IWU6 871 aa12.83□□□□□ -0.36
CAPN1-210ENST00000527699 DEFB123Q8N688 67 aa12.83□□□□□ -0.36
CAPN1-210ENST00000527699 R3HDMLQ9H3Y0 253 aa12.83□□□□□ -0.36
CAPN1-210ENST00000527699 HYPKQ9NX55 129 aa12.83□□□□□ -0.36
CAPN1-210ENST00000527699 ANKIB1Q9P2G1 1089 aa12.83□□□□□ -0.36
CAPN1-210ENST00000527699 HTTP42858 3142 aa12.83□□□□□ -0.36
CAPN1-210ENST00000527699 RTL9Q8NET4 1388 aa12.82□□□□□ -0.36
CAPN1-210ENST00000527699 WTIPA6NIX2 430 aaPredicted RBP12.82□□□□□ -0.36
CAPN1-210ENST00000527699 RPS8P62241 208 aaKnown RBP12.82□□□□□ -0.36
CAPN1-210ENST00000527699 C8orf58Q8NAV2 365 aa12.82□□□□□ -0.36
CAPN1-210ENST00000527699 EYA3Q99504 573 aa12.82□□□□□ -0.36
CAPN1-210ENST00000527699 ZC3H12CQ9C0D7 883 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms