RNA–Protein interactions for RNA: ENST00000526457.3

LRRK1-205, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 11,632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-205ENST00000526457 SNCBQ16143 134 aa8.74□□□□□ -1.01
LRRK1-205ENST00000526457 PNISRQ8TF01 805 aaKnown RBP8.74□□□□□ -1.01
LRRK1-205ENST00000526457 PRPF31Q8WWY3 499 aaKnown RBP8.74□□□□□ -1.01
LRRK1-205ENST00000526457 FERMT1Q9BQL6 677 aa8.74□□□□□ -1.01
LRRK1-205ENST00000526457 RIOK3O14730 519 aaKnown RBP8.74□□□□□ -1.01
LRRK1-205ENST00000526457 ATP5DP30049 168 aa8.74□□□□□ -1.01
LRRK1-205ENST00000526457 KARSQ15046 597 aaKnown RBP8.74□□□□□ -1.01
LRRK1-205ENST00000526457 ISM2Q6H9L7 571 aa8.74□□□□□ -1.01
LRRK1-205ENST00000526457 JAKMIP2Q96AA8 810 aa8.74□□□□□ -1.01
LRRK1-205ENST00000526457 NCAPD3P42695 1498 aa8.74□□□□□ -1.01
LRRK1-205ENST00000526457 ABCC11Q96J66 1382 aa8.74□□□□□ -1.01
LRRK1-205ENST00000526457 CETN1Q12798 172 aa8.74□□□□□ -1.01
LRRK1-205ENST00000526457 SYT10Q6XYQ8 523 aa8.74□□□□□ -1.01
LRRK1-205ENST00000526457 GRIN2BQ13224 1484 aa8.74□□□□□ -1.01
LRRK1-205ENST00000526457 TDRD9Q8NDG6 1382 aaKnown RBP8.74□□□□□ -1.01
LRRK1-205ENST00000526457 TBC1D31Q96DN5 1066 aa8.73□□□□□ -1.01
LRRK1-205ENST00000526457 LIMCH1Q9UPQ0 1083 aa8.73□□□□□ -1.01
LRRK1-205ENST00000526457 PABPN1LA6NDY0 278 aaKnown RBP8.73□□□□□ -1.01
LRRK1-205ENST00000526457 CFTRP13569 1480 aa8.73□□□□□ -1.01
LRRK1-205ENST00000526457 PSMD6Q15008 389 aa8.73□□□□□ -1.01
LRRK1-205ENST00000526457 AACSQ86V21 672 aa8.73□□□□□ -1.01
LRRK1-205ENST00000526457 RAB3IPQ96QF0 476 aaPredicted RBP8.73□□□□□ -1.01
LRRK1-205ENST00000526457 ANKRD24Q8TF21 1146 aa8.73□□□□□ -1.01
LRRK1-205ENST00000526457 MTRF1LQ9UGC7 380 aaKnown RBP8.73□□□□□ -1.01
LRRK1-205ENST00000526457 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.73□□□□□ -1.01
LRRK1-205ENST00000526457 DACT3Q96B18 629 aaPredicted RBP8.73□□□□□ -1.01
LRRK1-205ENST00000526457 SPAG5Q96R06 1193 aa8.73□□□□□ -1.01
LRRK1-205ENST00000526457 PPP1R9BQ96SB3 815 aa8.73□□□□□ -1.01
LRRK1-205ENST00000526457 STK38LQ9Y2H1 464 aa8.73□□□□□ -1.01
LRRK1-205ENST00000526457 PDE4DIPQ5VU43 2346 aa8.73□□□□□ -1.01
LRRK1-205ENST00000526457 ZNF76P36508 570 aa8.73□□□□□ -1.01
LRRK1-205ENST00000526457 TMED1Q13445 227 aa8.73□□□□□ -1.01
LRRK1-205ENST00000526457 ERCC6LQ2NKX8 1250 aa8.73□□□□□ -1.01
LRRK1-205ENST00000526457 WDR78Q5VTH9 848 aa8.73□□□□□ -1.01
LRRK1-205ENST00000526457 FERMT2Q96AC1 680 aa8.73□□□□□ -1.01
LRRK1-205ENST00000526457 U3KPZ7 1027 aaPredicted RBP8.73□□□□□ -1.01
LRRK1-205ENST00000526457 HIP1RO75146 1068 aa8.73□□□□□ -1.01
LRRK1-205ENST00000526457 ATP2A2P16615 1042 aaKnown RBP8.73□□□□□ -1.01
LRRK1-205ENST00000526457 HSPA1LP34931 641 aa8.73□□□□□ -1.01
LRRK1-205ENST00000526457 PRPHP41219 470 aa8.73□□□□□ -1.01
LRRK1-205ENST00000526457 SEPT10Q9P0V9 454 aa8.73□□□□□ -1.01
LRRK1-205ENST00000526457 GPRASP1Q5JY77 1395 aa8.73□□□□□ -1.01
LRRK1-205ENST00000526457 SSX2IPQ9Y2D8 614 aa8.73□□□□□ -1.01
LRRK1-205ENST00000526457 ERBINQ96RT1 1412 aa8.73□□□□□ -1.01
LRRK1-205ENST00000526457 PRIM1P49642 420 aaKnown RBP8.72□□□□□ -1.01
LRRK1-205ENST00000526457 ZNF569Q5MCW4 686 aa8.72□□□□□ -1.01
LRRK1-205ENST00000526457 TFIP11Q9UBB9 837 aaKnown RBP8.72□□□□□ -1.01
LRRK1-205ENST00000526457 DNAJC8O75937 253 aaPredicted RBP8.72□□□□□ -1.01
LRRK1-205ENST00000526457 TTC16Q8NEE8 873 aa8.72□□□□□ -1.01
LRRK1-205ENST00000526457 CTAGE1Q96RT6 745 aa8.72□□□□□ -1.01
LRRK1-205ENST00000526457 HGSO14964 777 aaPredicted RBP8.72□□□□□ -1.01
LRRK1-205ENST00000526457 LIG3P49916 1009 aa8.72□□□□□ -1.01
LRRK1-205ENST00000526457 TRPC3Q13507 836 aa8.72□□□□□ -1.01
LRRK1-205ENST00000526457 RASIP1Q5U651 963 aa8.72□□□□□ -1.01
LRRK1-205ENST00000526457 SMARCC2Q8TAQ2 1214 aa8.72□□□□□ -1.01
LRRK1-205ENST00000526457 LARSQ9P2J5 1176 aaKnown RBP8.72□□□□□ -1.01
LRRK1-205ENST00000526457 GOLGA6BA6NDN3 693 aa8.72□□□□□ -1.01
LRRK1-205ENST00000526457 TBC1D5Q92609 795 aa8.72□□□□□ -1.01
LRRK1-205ENST00000526457 TCHHQ07283 1943 aa8.72□□□□□ -1.01
LRRK1-205ENST00000526457 CHMP4BP1P59074 171 aa8.72□□□□□ -1.01
LRRK1-205ENST00000526457 GNL3LQ9NVN8 582 aaKnown RBP8.72□□□□□ -1.01
LRRK1-205ENST00000526457 NUTM2FA1L443 756 aa8.72□□□□□ -1.01
LRRK1-205ENST00000526457 KRT86O43790 486 aa8.72□□□□□ -1.01
LRRK1-205ENST00000526457 CEP104O60308 925 aa8.72□□□□□ -1.01
LRRK1-205ENST00000526457 MX1P20591 662 aa8.72□□□□□ -1.01
LRRK1-205ENST00000526457 GUCY1B3Q02153 619 aa8.72□□□□□ -1.01
LRRK1-205ENST00000526457 SDCCAG8Q86SQ7 713 aaPredicted RBP8.72□□□□□ -1.01
LRRK1-205ENST00000526457 SPATS2Q86XZ4 545 aaKnown RBP8.72□□□□□ -1.01
LRRK1-205ENST00000526457 VPS52Q8N1B4 723 aa8.72□□□□□ -1.01
LRRK1-205ENST00000526457 LZTFL1Q9NQ48 299 aa8.72□□□□□ -1.01
LRRK1-205ENST00000526457 PTPRGP23470 1445 aa8.72□□□□□ -1.01
LRRK1-205ENST00000526457 IGF1RP08069 1367 aa8.72□□□□□ -1.01
LRRK1-205ENST00000526457 FCHSD2O94868 740 aa8.72□□□□□ -1.01
LRRK1-205ENST00000526457 CCDC65Q8IXS2 484 aa8.72□□□□□ -1.01
LRRK1-205ENST00000526457 KDM5AP29375 1690 aaKnown RBP8.72□□□□□ -1.01
LRRK1-205ENST00000526457 LAMC3Q9Y6N6 1575 aa8.72□□□□□ -1.01
LRRK1-205ENST00000526457 GSTA5Q7RTV2 222 aa8.71□□□□□ -1.01
LRRK1-205ENST00000526457 AOPEPQ8N6M6 819 aa8.71□□□□□ -1.01
LRRK1-205ENST00000526457 KIAA1524Q8TCG1 905 aa8.71□□□□□ -1.01
LRRK1-205ENST00000526457 EXOSC9Q06265 439 aaKnown RBP8.71□□□□□ -1.01
LRRK1-205ENST00000526457 THEGQ9P2T0 379 aa8.71□□□□□ -1.01
LRRK1-205ENST00000526457 ODF2LQ9ULJ1 636 aa8.71□□□□□ -1.01
LRRK1-205ENST00000526457 BIRC2Q13490 618 aa8.71□□□□□ -1.01
LRRK1-205ENST00000526457 PHLDB3Q6NSJ2 640 aa8.71□□□□□ -1.01
LRRK1-205ENST00000526457 EFCC1Q9HA90 598 aa8.71□□□□□ -1.01
LRRK1-205ENST00000526457 ATAD2Q6PL18 1390 aa8.71□□□□□ -1.01
LRRK1-205ENST00000526457 TYRO3Q06418 890 aa8.71□□□□□ -1.01
LRRK1-205ENST00000526457 ATF7IPQ6VMQ6 1270 aa8.71□□□□□ -1.01
LRRK1-205ENST00000526457 TCP11L2Q8N4U5 519 aa8.71□□□□□ -1.01
LRRK1-205ENST00000526457 GUCA1BQ9UMX6 200 aa8.71□□□□□ -1.01
LRRK1-205ENST00000526457 SATB2Q9UPW6 733 aa8.71□□□□□ -1.01
LRRK1-205ENST00000526457 PRPF40BQ6NWY9 871 aaKnown RBP8.71□□□□□ -1.02
LRRK1-205ENST00000526457 VSIG1Q86XK7 387 aa8.71□□□□□ -1.02
LRRK1-205ENST00000526457 TNNC1P63316 161 aa8.71□□□□□ -1.02
LRRK1-205ENST00000526457 RNF123Q5XPI4 1314 aa8.71□□□□□ -1.02
LRRK1-205ENST00000526457 ZKSCAN8Q15776 578 aaPredicted RBP8.71□□□□□ -1.02
LRRK1-205ENST00000526457 KANK3Q6NY19 840 aa8.71□□□□□ -1.02
LRRK1-205ENST00000526457 SPECC1L-ADORA2AF8WAN1 911 aa8.71□□□□□ -1.02
LRRK1-205ENST00000526457 HNRNPMP52272 730 aaKnown RBP eCLIP8.71□□□□□ -1.02
LRRK1-205ENST00000526457 SESN3P58005 492 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms