RNA–Protein interactions for RNA: ENST00000525116.5

CASP4-205, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-205ENST00000525116 TFIP11Q9UBB9 837 aaKnown RBP9.58□□□□□ -0.88
CASP4-205ENST00000525116 SPG7Q9UQ90 795 aa9.58□□□□□ -0.88
CASP4-205ENST00000525116 ADCY9O60503 1353 aa9.58□□□□□ -0.88
CASP4-205ENST00000525116 FLT4P35916 1363 aa9.58□□□□□ -0.88
CASP4-205ENST00000525116 TOGARAM1Q9Y4F4 1720 aa9.57□□□□□ -0.88
CASP4-205ENST00000525116 ITGB4P16144 1822 aa9.57□□□□□ -0.88
CASP4-205ENST00000525116 ITPK1Q13572 414 aa9.57□□□□□ -0.88
CASP4-205ENST00000525116 RETREG2Q8NC44 543 aa9.57□□□□□ -0.88
CASP4-205ENST00000525116 UCN2Q96RP3 112 aa9.57□□□□□ -0.88
CASP4-205ENST00000525116 TMOD3Q9NYL9 352 aa9.57□□□□□ -0.88
CASP4-205ENST00000525116 ASAP1Q9ULH1 1129 aa9.57□□□□□ -0.88
CASP4-205ENST00000525116 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.56□□□□□ -0.88
CASP4-205ENST00000525116 ATP9BO43861 1147 aa9.56□□□□□ -0.88
CASP4-205ENST00000525116 MMP10P09238 476 aa9.56□□□□□ -0.88
CASP4-205ENST00000525116 SSFA2P28290 1259 aa9.56□□□□□ -0.88
CASP4-205ENST00000525116 TRAIPQ9BWF2 469 aa9.56□□□□□ -0.88
CASP4-205ENST00000525116 CARD14Q9BXL6 1004 aa9.56□□□□□ -0.88
CASP4-205ENST00000525116 UBR3Q6ZT12 1888 aa9.55□□□□□ -0.88
CASP4-205ENST00000525116 KIF20BQ96Q89 1820 aa9.55□□□□□ -0.88
CASP4-205ENST00000525116 A0A0G2JLW4 131 aa9.55□□□□□ -0.88
CASP4-205ENST00000525116 ARHGAP27Q6ZUM4 889 aa9.55□□□□□ -0.88
CASP4-205ENST00000525116 ZBTB33Q86T24 672 aa9.55□□□□□ -0.88
CASP4-205ENST00000525116 NFATC2IPQ8NCF5 419 aa9.55□□□□□ -0.88
CASP4-205ENST00000525116 BCS1LQ9Y276 419 aa9.55□□□□□ -0.88
CASP4-205ENST00000525116 PCDHB9Q9Y5E1 797 aa9.55□□□□□ -0.88
CASP4-205ENST00000525116 NSD3Q9BZ95 1437 aa9.55□□□□□ -0.88
CASP4-205ENST00000525116 S1PR4O95977 384 aa9.54□□□□□ -0.88
CASP4-205ENST00000525116 TRAPPC3LQ5T215 181 aa9.54□□□□□ -0.88
CASP4-205ENST00000525116 ATG3Q9NT62 314 aa9.54□□□□□ -0.88
CASP4-205ENST00000525116 MAFBQ9Y5Q3 323 aaPredicted RBP9.54□□□□□ -0.88
CASP4-205ENST00000525116 KIF24Q5T7B8 1368 aa9.53□□□□□ -0.88
CASP4-205ENST00000525116 PHKG2P15735 406 aa9.53□□□□□ -0.88
CASP4-205ENST00000525116 TNNT2P45379 298 aaPredicted RBP9.53□□□□□ -0.88
CASP4-205ENST00000525116 SLFNL1Q499Z3 407 aa9.53□□□□□ -0.88
CASP4-205ENST00000525116 CDCA8Q53HL2 280 aa9.53□□□□□ -0.88
CASP4-205ENST00000525116 TBC1D9Q6ZT07 1266 aa9.53□□□□□ -0.88
CASP4-205ENST00000525116 IFNL2Q8IZJ0 200 aa9.53□□□□□ -0.88
CASP4-205ENST00000525116 KCTD17Q8N5Z5 321 aa9.53□□□□□ -0.88
CASP4-205ENST00000525116 POLR3GLQ9BT43 218 aa9.53□□□□□ -0.88
CASP4-205ENST00000525116 HCSTQ9UBK5 93 aa9.53□□□□□ -0.88
CASP4-205ENST00000525116 FCF1Q9Y324 198 aaKnown RBP9.53□□□□□ -0.88
CASP4-205ENST00000525116 PKD1L3Q7Z443 1732 aa9.53□□□□□ -0.88
CASP4-205ENST00000525116 MAP2P11137 1827 aaKnown RBP9.52□□□□□ -0.89
CASP4-205ENST00000525116 DPEP1P16444 411 aa9.52□□□□□ -0.89
CASP4-205ENST00000525116 KCNC4Q03721 635 aa9.52□□□□□ -0.89
CASP4-205ENST00000525116 AGERQ15109 404 aa9.52□□□□□ -0.89
CASP4-205ENST00000525116 BPHLQ86WA6 291 aaPredicted RBP9.52□□□□□ -0.89
CASP4-205ENST00000525116 NLGN1Q8N2Q7 840 aa9.52□□□□□ -0.89
CASP4-205ENST00000525116 ADAM32Q8TC27 787 aa9.52□□□□□ -0.89
CASP4-205ENST00000525116 NMRK2Q9NPI5 230 aa9.52□□□□□ -0.89
CASP4-205ENST00000525116 PODXL2Q9NZ53 605 aa9.52□□□□□ -0.89
CASP4-205ENST00000525116 RTCBQ9Y3I0 505 aaKnown RBP9.52□□□□□ -0.89
CASP4-205ENST00000525116 WASHC2AQ641Q2 1341 aa9.52□□□□□ -0.89
CASP4-205ENST00000525116 N4BP2Q86UW6 1770 aaPredicted RBP9.51□□□□□ -0.89
CASP4-205ENST00000525116 SKIP12755 728 aa9.51□□□□□ -0.89
CASP4-205ENST00000525116 RFC4P35249 363 aa9.51□□□□□ -0.89
CASP4-205ENST00000525116 GGCXP38435 758 aa9.51□□□□□ -0.89
CASP4-205ENST00000525116 TGFB2P61812 414 aa9.51□□□□□ -0.89
CASP4-205ENST00000525116 TRIM26Q12899 539 aaPredicted RBP9.51□□□□□ -0.89
CASP4-205ENST00000525116 PTCRAQ6ISU1 281 aaPredicted RBP9.51□□□□□ -0.89
CASP4-205ENST00000525116 SH3BP5LQ7L8J4 393 aa9.51□□□□□ -0.89
CASP4-205ENST00000525116 DZIP3Q86Y13 1208 aaKnown RBP9.51□□□□□ -0.89
CASP4-205ENST00000525116 SLC4A9Q96Q91 983 aa9.51□□□□□ -0.89
CASP4-205ENST00000525116 POLKQ9UBT6 870 aa9.51□□□□□ -0.89
CASP4-205ENST00000525116 USTQ9Y2C2 406 aa9.51□□□□□ -0.89
CASP4-205ENST00000525116 CICQ96RK0 1608 aaPredicted RBP9.51□□□□□ -0.89
CASP4-205ENST00000525116 PXDNLA1KZ92 1463 aa9.51□□□□□ -0.89
CASP4-205ENST00000525116 MAGEB6P1A0A0J9YX57 407 aa9.5□□□□□ -0.89
CASP4-205ENST00000525116 TOMM70O94826 608 aa9.5□□□□□ -0.89
CASP4-205ENST00000525116 EIF4A2Q14240 407 aaKnown RBP9.5□□□□□ -0.89
CASP4-205ENST00000525116 NKX2-3Q8TAU0 364 aa9.5□□□□□ -0.89
CASP4-205ENST00000525116 CCDC87Q9NVE4 849 aa9.5□□□□□ -0.89
CASP4-205ENST00000525116 CEP126Q9P2H0 1117 aa9.5□□□□□ -0.89
CASP4-205ENST00000525116 PARP3Q9Y6F1 533 aa9.5□□□□□ -0.89
CASP4-205ENST00000525116 NCAPD2Q15021 1401 aa9.49□□□□□ -0.89
CASP4-205ENST00000525116 ZBTB24O43167 697 aaPredicted RBP9.49□□□□□ -0.89
CASP4-205ENST00000525116 GYS1P13807 737 aa9.49□□□□□ -0.89
CASP4-205ENST00000525116 HTRA3P83110 453 aa9.49□□□□□ -0.89
CASP4-205ENST00000525116 C9orf131Q5VYM1 1079 aa9.49□□□□□ -0.89
CASP4-205ENST00000525116 RNF135Q8IUD6 432 aa9.49□□□□□ -0.89
CASP4-205ENST00000525116 C16orf71Q8IYS4 520 aaPredicted RBP9.49□□□□□ -0.89
CASP4-205ENST00000525116 DNAJC5GQ8N7S2 189 aa9.49□□□□□ -0.89
CASP4-205ENST00000525116 BAP1Q92560 729 aa9.49□□□□□ -0.89
CASP4-205ENST00000525116 OCSTAMPQ9BR26 566 aa9.49□□□□□ -0.89
CASP4-205ENST00000525116 VRTNQ9H8Y1 702 aa9.49□□□□□ -0.89
CASP4-205ENST00000525116 USP17L3A6NCW0 530 aa9.48□□□□□ -0.89
CASP4-205ENST00000525116 USP17L4A6NCW7 530 aa9.48□□□□□ -0.89
CASP4-205ENST00000525116 USP17L5A8MUK1 530 aa9.48□□□□□ -0.89
CASP4-205ENST00000525116 ERVV-2B6SEH9 535 aa9.48□□□□□ -0.89
CASP4-205ENST00000525116 PIK3CDO00329 1044 aa9.48□□□□□ -0.89
CASP4-205ENST00000525116 PTCD1O75127 700 aaKnown RBP9.48□□□□□ -0.89
CASP4-205ENST00000525116 RPS6KA4O75676 772 aa9.48□□□□□ -0.89
CASP4-205ENST00000525116 CABP4P57796 275 aa9.48□□□□□ -0.89
CASP4-205ENST00000525116 LINC01559Q495D7 138 aa9.48□□□□□ -0.89
CASP4-205ENST00000525116 RC3H1Q5TC82 1133 aaKnown RBP9.48□□□□□ -0.89
CASP4-205ENST00000525116 USP17L2Q6R6M4 530 aa9.48□□□□□ -0.89
CASP4-205ENST00000525116 USP17L1Q7RTZ2 530 aa9.48□□□□□ -0.89
CASP4-205ENST00000525116 PLEKHM2Q8IWE5 1019 aa9.48□□□□□ -0.89
CASP4-205ENST00000525116 ZNF511Q8NB15 262 aa9.48□□□□□ -0.89
CASP4-205ENST00000525116 RNF166Q96A37 237 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms