RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-213ENST00000524516 PRKG1Q13976 671 aa11.04□□□□□ -0.64
PUM1-213ENST00000524516 LRIT3Q3SXY7 679 aa11.04□□□□□ -0.64
PUM1-213ENST00000524516 ABCC4O15439 1325 aa11.04□□□□□ -0.64
PUM1-213ENST00000524516 DDX60Q8IY21 1712 aaKnown RBP11.04□□□□□ -0.64
PUM1-213ENST00000524516 SPTBN5Q9NRC6 3674 aaKnown RBP11.03□□□□□ -0.64
PUM1-213ENST00000524516 FARP2O94887 1054 aaPredicted RBP11.03□□□□□ -0.64
PUM1-213ENST00000524516 HLFQ16534 295 aa11.03□□□□□ -0.64
PUM1-213ENST00000524516 RIMBP2O15034 1052 aa11.02□□□□□ -0.65
PUM1-213ENST00000524516 ECE2O60344 883 aa11.02□□□□□ -0.65
PUM1-213ENST00000524516 ECM2O94769 699 aaPredicted RBP11.02□□□□□ -0.65
PUM1-213ENST00000524516 BMP8BP34820 402 aa11.02□□□□□ -0.65
PUM1-213ENST00000524516 MAP3K12Q12852 859 aa11.02□□□□□ -0.65
PUM1-213ENST00000524516 WASHC4Q2M389 1173 aa11.02□□□□□ -0.65
PUM1-213ENST00000524516 SP8Q8IXZ3 490 aa11.02□□□□□ -0.65
PUM1-213ENST00000524516 FAM161BQ96MY7 647 aa11.02□□□□□ -0.65
PUM1-213ENST00000524516 SIN3AQ96ST3 1273 aa11.02□□□□□ -0.65
PUM1-213ENST00000524516 ZNF646O15015 1829 aaPredicted RBP11.01□□□□□ -0.65
PUM1-213ENST00000524516 MTFR1Q15390 333 aa11.01□□□□□ -0.65
PUM1-213ENST00000524516 C3orf67Q6ZVT6 689 aa11.01□□□□□ -0.65
PUM1-213ENST00000524516 UBE2Q1Q7Z7E8 422 aa11.01□□□□□ -0.65
PUM1-213ENST00000524516 TDHQ8IZJ6 230 aa11.01□□□□□ -0.65
PUM1-213ENST00000524516 MAFAQ8NHW3 353 aaPredicted RBP11.01□□□□□ -0.65
PUM1-213ENST00000524516 SLC10A4Q96EP9 437 aa11.01□□□□□ -0.65
PUM1-213ENST00000524516 GUCD1Q96NT3 240 aa11.01□□□□□ -0.65
PUM1-213ENST00000524516 NLRP3Q96P20 1036 aa11.01□□□□□ -0.65
PUM1-213ENST00000524516 USP16Q9Y5T5 823 aa11.01□□□□□ -0.65
PUM1-213ENST00000524516 RTL9Q8NET4 1388 aa11.01□□□□□ -0.65
PUM1-213ENST00000524516 IBTKQ9P2D0 1353 aaPredicted RBP11.01□□□□□ -0.65
PUM1-213ENST00000524516 DUOX1Q9NRD9 1551 aa11□□□□□ -0.65
PUM1-213ENST00000524516 BBOX1O75936 387 aa11□□□□□ -0.65
PUM1-213ENST00000524516 ZBTB48P10074 688 aaPredicted RBP11□□□□□ -0.65
PUM1-213ENST00000524516 GPTP24298 496 aa11□□□□□ -0.65
PUM1-213ENST00000524516 GJA8P48165 433 aa11□□□□□ -0.65
PUM1-213ENST00000524516 GDF15Q99988 308 aa11□□□□□ -0.65
PUM1-213ENST00000524516 KCNQ5Q9NR82 932 aa11□□□□□ -0.65
PUM1-213ENST00000524516 ANGEL1Q9UNK9 670 aaKnown RBP11□□□□□ -0.65
PUM1-213ENST00000524516 EYSQ5T1H1 3165 aa10.99□□□□□ -0.65
PUM1-213ENST00000524516 KIF22Q14807 665 aa10.99□□□□□ -0.65
PUM1-213ENST00000524516 DOK7Q18PE1 504 aa10.99□□□□□ -0.65
PUM1-213ENST00000524516 CDCA8Q53HL2 280 aa10.99□□□□□ -0.65
PUM1-213ENST00000524516 TAF1P21675 1872 aa10.99□□□□□ -0.65
PUM1-213ENST00000524516 G3V3G9 751 aa10.98□□□□□ -0.65
PUM1-213ENST00000524516 C6orf229H3BNL8 230 aa10.98□□□□□ -0.65
PUM1-213ENST00000524516 ZNF280AP59817 542 aaPredicted RBP10.98□□□□□ -0.65
PUM1-213ENST00000524516 MTHFSDQ2M296 383 aaKnown RBP10.98□□□□□ -0.65
PUM1-213ENST00000524516 DCAF8Q5TAQ9 597 aa10.98□□□□□ -0.65
PUM1-213ENST00000524516 WNK4Q96J92 1243 aa10.98□□□□□ -0.65
PUM1-213ENST00000524516 MYOZ2Q9NPC6 264 aa10.98□□□□□ -0.65
PUM1-213ENST00000524516 GJB1P08034 283 aa10.97□□□□□ -0.65
PUM1-213ENST00000524516 VIL1P09327 827 aaKnown RBP10.97□□□□□ -0.65
PUM1-213ENST00000524516 HMOX1P09601 288 aa10.97□□□□□ -0.65
PUM1-213ENST00000524516 LDLRAD1Q5T700 205 aa10.97□□□□□ -0.65
PUM1-213ENST00000524516 SUSD4Q5VX71 490 aa10.97□□□□□ -0.65
PUM1-213ENST00000524516 NGEFQ8N5V2 710 aa10.97□□□□□ -0.65
PUM1-213ENST00000524516 RNF208Q9H0X6 261 aa10.97□□□□□ -0.65
PUM1-213ENST00000524516 BIN2Q9UBW5 565 aaPredicted RBP10.97□□□□□ -0.65
PUM1-213ENST00000524516 ZMYND8Q9ULU4 1186 aaPredicted RBP10.97□□□□□ -0.65
PUM1-213ENST00000524516 UBN2Q6ZU65 1347 aa10.97□□□□□ -0.65
PUM1-213ENST00000524516 LAMB1P07942 1786 aa10.97□□□□□ -0.65
PUM1-213ENST00000524516 SIPA1L3O60292 1781 aaPredicted RBP10.96□□□□□ -0.65
PUM1-213ENST00000524516 SYNGAP1Q96PV0 1343 aa10.96□□□□□ -0.65
PUM1-213ENST00000524516 NTSR2O95665 410 aa10.96□□□□□ -0.65
PUM1-213ENST00000524516 CCL5P13501 91 aa10.96□□□□□ -0.65
PUM1-213ENST00000524516 TAF1CQ15572 869 aaPredicted RBP10.96□□□□□ -0.65
PUM1-213ENST00000524516 DDX46Q7L014 1031 aaKnown RBP10.96□□□□□ -0.65
PUM1-213ENST00000524516 C7orf61Q8IZ16 206 aa10.96□□□□□ -0.65
PUM1-213ENST00000524516 UBE2OQ9C0C9 1292 aaKnown RBP10.96□□□□□ -0.65
PUM1-213ENST00000524516 NSFL1CQ9UNZ2 370 aaKnown RBP10.96□□□□□ -0.65
PUM1-213ENST00000524516 NUP98P52948 1817 aa10.95□□□□□ -0.66
PUM1-213ENST00000524516 BTBD11A6QL63 1104 aa10.95□□□□□ -0.66
PUM1-213ENST00000524516 NBPF26B4DH59 902 aa10.95□□□□□ -0.66
PUM1-213ENST00000524516 KCNQ3O43525 872 aa10.95□□□□□ -0.66
PUM1-213ENST00000524516 USP17L8P0C7I0 530 aa10.95□□□□□ -0.66
PUM1-213ENST00000524516 TJAP1Q5JTD0 557 aa10.95□□□□□ -0.66
PUM1-213ENST00000524516 ZNF697Q5TEC3 545 aa10.95□□□□□ -0.66
PUM1-213ENST00000524516 FAM109BQ6ICB4 259 aaPredicted RBP10.95□□□□□ -0.66
PUM1-213ENST00000524516 NBPF10Q6P3W6 841 aaKnown RBP10.95□□□□□ -0.66
PUM1-213ENST00000524516 KIF6Q6ZMV9 814 aa10.95□□□□□ -0.66
PUM1-213ENST00000524516 PPP1R42Q7Z4L9 355 aa10.95□□□□□ -0.66
PUM1-213ENST00000524516 AGBL3Q8NEM8 1001 aa10.95□□□□□ -0.66
PUM1-213ENST00000524516 U2AF1L4Q8WU68 220 aaKnown RBP10.95□□□□□ -0.66
PUM1-213ENST00000524516 NECTIN2Q92692 538 aa10.95□□□□□ -0.66
PUM1-213ENST00000524516 CLMNQ96JQ2 1002 aa10.95□□□□□ -0.66
PUM1-213ENST00000524516 EYA3Q99504 573 aa10.95□□□□□ -0.66
PUM1-213ENST00000524516 ARHGAP39Q9C0H5 1083 aa10.95□□□□□ -0.66
PUM1-213ENST00000524516 ZFYVE28Q9HCC9 887 aa10.95□□□□□ -0.66
PUM1-213ENST00000524516 FZD1Q9UP38 647 aa10.95□□□□□ -0.66
PUM1-213ENST00000524516 ZSWIM8A7E2V4 1837 aa10.95□□□□□ -0.66
PUM1-213ENST00000524516 ERVV-1B6SEH8 477 aa10.94□□□□□ -0.66
PUM1-213ENST00000524516 SNRPA1P09661 255 aaKnown RBP10.94□□□□□ -0.66
PUM1-213ENST00000524516 MAGEA10P43363 369 aaPredicted RBP10.94□□□□□ -0.66
PUM1-213ENST00000524516 PRMT2P55345 433 aa10.94□□□□□ -0.66
PUM1-213ENST00000524516 GRAPQ13588 217 aa10.94□□□□□ -0.66
PUM1-213ENST00000524516 NBPF9Q3BBW0 867 aa10.94□□□□□ -0.66
PUM1-213ENST00000524516 RSBN1LQ6PCB5 846 aaPredicted RBP10.94□□□□□ -0.66
PUM1-213ENST00000524516 TMC4Q7Z404 712 aa10.94□□□□□ -0.66
PUM1-213ENST00000524516 GRAPLQ8TC17 118 aaPredicted RBP10.94□□□□□ -0.66
PUM1-213ENST00000524516 HCN4Q9Y3Q4 1203 aa10.94□□□□□ -0.66
PUM1-213ENST00000524516 LRRC37AA6NMS7 1700 aa10.94□□□□□ -0.66
PUM1-213ENST00000524516 MUC3AQ02505 3323 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms