RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 NPR1P16066 1061 aa10.99□□□□□ -0.65
CSMD1-208ENST00000520561 RPS8P62241 208 aaKnown RBP10.99□□□□□ -0.65
CSMD1-208ENST00000520561 C2CD5Q86YS7 1000 aa10.99□□□□□ -0.65
CSMD1-208ENST00000520561 MASTLQ96GX5 879 aa10.99□□□□□ -0.65
CSMD1-208ENST00000520561 CRAMP1Q96RY5 1269 aa10.99□□□□□ -0.65
CSMD1-208ENST00000520561 BSDC1Q9NW68 430 aaPredicted RBP10.99□□□□□ -0.65
CSMD1-208ENST00000520561 ATF5Q9Y2D1 282 aaPredicted RBP10.99□□□□□ -0.65
CSMD1-208ENST00000520561 RIPOR2Q9Y4F9 1068 aa10.99□□□□□ -0.65
CSMD1-208ENST00000520561 AOX1Q06278 1338 aa10.99□□□□□ -0.65
CSMD1-208ENST00000520561 ARAP2Q8WZ64 1704 aa10.98□□□□□ -0.65
CSMD1-208ENST00000520561 H0YIN7 160 aa10.98□□□□□ -0.65
CSMD1-208ENST00000520561 SRGNP10124 158 aa10.98□□□□□ -0.65
CSMD1-208ENST00000520561 HOXA10P31260 410 aaPredicted RBP10.98□□□□□ -0.65
CSMD1-208ENST00000520561 PUM3Q15397 648 aaKnown RBP10.98□□□□□ -0.65
CSMD1-208ENST00000520561 ATP2B3Q16720 1220 aa10.98□□□□□ -0.65
CSMD1-208ENST00000520561 TMC4Q7Z404 712 aa10.98□□□□□ -0.65
CSMD1-208ENST00000520561 PLEKHM2Q8IWE5 1019 aa10.98□□□□□ -0.65
CSMD1-208ENST00000520561 C16orf71Q8IYS4 520 aaPredicted RBP10.98□□□□□ -0.65
CSMD1-208ENST00000520561 OTUD7AQ8TE49 926 aaPredicted RBP10.98□□□□□ -0.65
CSMD1-208ENST00000520561 TTC41PQ6P2S7 1318 aa10.98□□□□□ -0.65
CSMD1-208ENST00000520561 LRRC37AA6NMS7 1700 aa10.98□□□□□ -0.65
CSMD1-208ENST00000520561 DLEC1Q9Y238 1755 aa10.98□□□□□ -0.65
CSMD1-208ENST00000520561 KIF13BQ9NQT8 1826 aa10.98□□□□□ -0.65
CSMD1-208ENST00000520561 A0A1B0GUL7 405 aa10.97□□□□□ -0.65
CSMD1-208ENST00000520561 ERC2O15083 957 aa10.97□□□□□ -0.65
CSMD1-208ENST00000520561 PDE8BO95263 885 aa10.97□□□□□ -0.65
CSMD1-208ENST00000520561 SLC5A1P13866 664 aa10.97□□□□□ -0.65
CSMD1-208ENST00000520561 ALDH1B1P30837 517 aa10.97□□□□□ -0.65
CSMD1-208ENST00000520561 PDE1AP54750 535 aa10.97□□□□□ -0.65
CSMD1-208ENST00000520561 CHRNDQ07001 517 aa10.97□□□□□ -0.65
CSMD1-208ENST00000520561 STYK1Q6J9G0 422 aa10.97□□□□□ -0.65
CSMD1-208ENST00000520561 VGLL2Q8N8G2 317 aa10.97□□□□□ -0.65
CSMD1-208ENST00000520561 EAF2Q96CJ1 260 aaPredicted RBP10.97□□□□□ -0.65
CSMD1-208ENST00000520561 NEUROD6Q96NK8 337 aa10.97□□□□□ -0.65
CSMD1-208ENST00000520561 ANKRD2Q9GZV1 360 aa10.97□□□□□ -0.65
CSMD1-208ENST00000520561 CCDC8Q9H0W5 538 aaPredicted RBP10.97□□□□□ -0.65
CSMD1-208ENST00000520561 SALL3Q9BXA9 1300 aa10.97□□□□□ -0.65
CSMD1-208ENST00000520561 TAF1P21675 1872 aa10.97□□□□□ -0.65
CSMD1-208ENST00000520561 PPEF1O14829 653 aaPredicted RBP10.96□□□□□ -0.65
CSMD1-208ENST00000520561 BBOX1O75936 387 aa10.96□□□□□ -0.65
CSMD1-208ENST00000520561 IFIT1P09914 478 aaKnown RBP10.96□□□□□ -0.65
CSMD1-208ENST00000520561 KCNJ4P48050 445 aa10.96□□□□□ -0.65
CSMD1-208ENST00000520561 GORABQ5T7V8 394 aa10.96□□□□□ -0.65
CSMD1-208ENST00000520561 LPIN2Q92539 896 aa10.96□□□□□ -0.65
CSMD1-208ENST00000520561 ZNF622Q969S3 477 aaKnown RBP eCLIP10.96□□□□□ -0.65
CSMD1-208ENST00000520561 DBNDD2Q9BQY9 259 aa10.96□□□□□ -0.65
CSMD1-208ENST00000520561 TMX4Q9H1E5 349 aaPredicted RBP10.96□□□□□ -0.65
CSMD1-208ENST00000520561 OSBPL3Q9H4L5 887 aa10.96□□□□□ -0.65
CSMD1-208ENST00000520561 ECHDC1Q9NTX5 307 aa10.96□□□□□ -0.65
CSMD1-208ENST00000520561 TLR7Q9NYK1 1049 aaKnown RBP10.96□□□□□ -0.65
CSMD1-208ENST00000520561 STAP2Q9UGK3 403 aa10.96□□□□□ -0.65
CSMD1-208ENST00000520561 DBNLQ9UJU6 430 aaKnown RBP10.96□□□□□ -0.65
CSMD1-208ENST00000520561 MINPP1Q9UNW1 487 aa10.96□□□□□ -0.65
CSMD1-208ENST00000520561 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.96□□□□□ -0.65
CSMD1-208ENST00000520561 GLRX3O76003 335 aaKnown RBP10.95□□□□□ -0.66
CSMD1-208ENST00000520561 TTC22Q5TAA0 569 aa10.95□□□□□ -0.66
CSMD1-208ENST00000520561 HELBQ8NG08 1087 aaPredicted RBP10.95□□□□□ -0.66
CSMD1-208ENST00000520561 CNKSR1Q969H4 720 aa10.95□□□□□ -0.66
CSMD1-208ENST00000520561 SPON1Q9HCB6 807 aa10.95□□□□□ -0.66
CSMD1-208ENST00000520561 CACNA1SQ13698 1873 aa10.95□□□□□ -0.66
CSMD1-208ENST00000520561 XDHP47989 1333 aa10.94□□□□□ -0.66
CSMD1-208ENST00000520561 TAF5LO75529 589 aa10.94□□□□□ -0.66
CSMD1-208ENST00000520561 FGFR2P21802 821 aa10.94□□□□□ -0.66
CSMD1-208ENST00000520561 CHRNA5P30532 468 aa10.94□□□□□ -0.66
CSMD1-208ENST00000520561 BMP2KLQ5H9B9 411 aa10.94□□□□□ -0.66
CSMD1-208ENST00000520561 CCDC158Q5M9N0 1113 aa10.94□□□□□ -0.66
CSMD1-208ENST00000520561 TSHZ3Q63HK5 1081 aa10.94□□□□□ -0.66
CSMD1-208ENST00000520561 XAGE2Q96GT9 111 aa10.94□□□□□ -0.66
CSMD1-208ENST00000520561 SGIP1Q9BQI5 828 aa10.94□□□□□ -0.66
CSMD1-208ENST00000520561 ANKIB1Q9P2G1 1089 aa10.94□□□□□ -0.66
CSMD1-208ENST00000520561 GSPT1P15170 499 aaKnown RBP10.93□□□□□ -0.66
CSMD1-208ENST00000520561 TGFB2P61812 414 aa10.93□□□□□ -0.66
CSMD1-208ENST00000520561 TIMM10P62072 90 aa10.93□□□□□ -0.66
CSMD1-208ENST00000520561 UBE4AQ14139 1066 aa10.93□□□□□ -0.66
CSMD1-208ENST00000520561 TTC39AQ5SRH9 613 aa10.93□□□□□ -0.66
CSMD1-208ENST00000520561 PRPF40BQ6NWY9 871 aaKnown RBP10.93□□□□□ -0.66
CSMD1-208ENST00000520561 KLHL34Q8N239 644 aa10.93□□□□□ -0.66
CSMD1-208ENST00000520561 PI4K2BQ8TCG2 481 aa10.93□□□□□ -0.66
CSMD1-208ENST00000520561 ATP6V0A2Q9Y487 856 aa10.93□□□□□ -0.66
CSMD1-208ENST00000520561 KIAA1551Q9HCM1 1747 aa10.92□□□□□ -0.66
CSMD1-208ENST00000520561 ZNF804BA4D1E1 1349 aa10.92□□□□□ -0.66
CSMD1-208ENST00000520561 UQCRFS1P1P0C7P4 283 aa10.92□□□□□ -0.66
CSMD1-208ENST00000520561 ATP2B4P23634 1241 aa10.92□□□□□ -0.66
CSMD1-208ENST00000520561 ADORA1P30542 326 aa10.92□□□□□ -0.66
CSMD1-208ENST00000520561 PTGER2P43116 358 aa10.92□□□□□ -0.66
CSMD1-208ENST00000520561 SP8Q8IXZ3 490 aa10.92□□□□□ -0.66
CSMD1-208ENST00000520561 PPP1R1BQ9UD71 204 aaPredicted RBP10.92□□□□□ -0.66
CSMD1-208ENST00000520561 GGA1Q9UJY5 639 aa10.92□□□□□ -0.66
CSMD1-208ENST00000520561 LEMD3Q9Y2U8 911 aa10.92□□□□□ -0.66
CSMD1-208ENST00000520561 CD2APQ9Y5K6 639 aa10.92□□□□□ -0.66
CSMD1-208ENST00000520561 TRIM6-TRIM34B2RNG4 842 aa10.91□□□□□ -0.66
CSMD1-208ENST00000520561 UFL1O94874 794 aa10.91□□□□□ -0.66
CSMD1-208ENST00000520561 DPEP1P16444 411 aa10.91□□□□□ -0.66
CSMD1-208ENST00000520561 ATP5JP18859 108 aa10.91□□□□□ -0.66
CSMD1-208ENST00000520561 GPSM2P81274 684 aa10.91□□□□□ -0.66
CSMD1-208ENST00000520561 CAVIN4Q5BKX8 364 aa10.91□□□□□ -0.66
CSMD1-208ENST00000520561 CNTROBQ8N137 903 aa10.91□□□□□ -0.66
CSMD1-208ENST00000520561 TTLL6Q8N841 843 aa10.91□□□□□ -0.66
CSMD1-208ENST00000520561 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.91□□□□□ -0.66
CSMD1-208ENST00000520561 BOLA2Q9H3K6 86 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms