RNA–Protein interactions for RNA: ENST00000520525.1

TRAPPC13-212, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-212ENST00000520525 LPIN3Q9BQK8 851 aa6.07□□□□□ -1.44
TRAPPC13-212ENST00000520525 PAX4O43316 350 aa6.06□□□□□ -1.44
TRAPPC13-212ENST00000520525 XYLBO75191 536 aa6.06□□□□□ -1.44
TRAPPC13-212ENST00000520525 NOS3P29474 1203 aa6.06□□□□□ -1.44
TRAPPC13-212ENST00000520525 TXKP42681 527 aa6.06□□□□□ -1.44
TRAPPC13-212ENST00000520525 IREB2P48200 963 aaKnown RBP6.06□□□□□ -1.44
TRAPPC13-212ENST00000520525 MLLT1Q03111 559 aaPredicted RBP6.06□□□□□ -1.44
TRAPPC13-212ENST00000520525 CMTR1Q8N1G2 835 aaKnown RBP6.06□□□□□ -1.44
TRAPPC13-212ENST00000520525 RETREG2Q8NC44 543 aa6.06□□□□□ -1.44
TRAPPC13-212ENST00000520525 FMNL2Q96PY5 1086 aa6.06□□□□□ -1.44
TRAPPC13-212ENST00000520525 RGS9O75916 674 aaPredicted RBP6.05□□□□□ -1.44
TRAPPC13-212ENST00000520525 NAA30Q147X3 362 aaPredicted RBP6.05□□□□□ -1.44
TRAPPC13-212ENST00000520525 PCSK7Q16549 785 aa6.05□□□□□ -1.44
TRAPPC13-212ENST00000520525 PERM1Q5SV97 790 aa6.05□□□□□ -1.44
TRAPPC13-212ENST00000520525 FBXO11Q86XK2 927 aa6.05□□□□□ -1.44
TRAPPC13-212ENST00000520525 TLR7Q9NYK1 1049 aaKnown RBP6.05□□□□□ -1.44
TRAPPC13-212ENST00000520525 FRRS1LQ9P0K9 344 aa6.05□□□□□ -1.44
TRAPPC13-212ENST00000520525 PTCD1O75127 700 aaKnown RBP6.04□□□□□ -1.44
TRAPPC13-212ENST00000520525 BRD2P25440 801 aaKnown RBP6.04□□□□□ -1.44
TRAPPC13-212ENST00000520525 NRLP54845 237 aa6.04□□□□□ -1.44
TRAPPC13-212ENST00000520525 SLC51AQ86UW1 340 aa6.04□□□□□ -1.44
TRAPPC13-212ENST00000520525 DTWD1Q8N5C7 304 aa6.04□□□□□ -1.44
TRAPPC13-212ENST00000520525 PCMTD2Q9NV79 361 aa6.04□□□□□ -1.44
TRAPPC13-212ENST00000520525 TMEM88BA6NKF7 163 aa6.03□□□□□ -1.44
TRAPPC13-212ENST00000520525 MMP20O60882 483 aa6.03□□□□□ -1.44
TRAPPC13-212ENST00000520525 HOXD8P13378 290 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC13-212ENST00000520525 ATP2B4P23634 1241 aa6.03□□□□□ -1.44
TRAPPC13-212ENST00000520525 MSL1Q68DK7 614 aa6.03□□□□□ -1.44
TRAPPC13-212ENST00000520525 PRR23CQ6ZRP0 262 aa6.03□□□□□ -1.44
TRAPPC13-212ENST00000520525 HFE2Q6ZVN8 426 aa6.03□□□□□ -1.44
TRAPPC13-212ENST00000520525 MEGF10Q96KG7 1140 aa6.03□□□□□ -1.44
TRAPPC13-212ENST00000520525 USTQ9Y2C2 406 aa6.03□□□□□ -1.44
TRAPPC13-212ENST00000520525 ARID1BQ8NFD5 2236 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC13-212ENST00000520525 ZBTB39O15060 712 aa6.02□□□□□ -1.45
TRAPPC13-212ENST00000520525 COBLO75128 1261 aa6.02□□□□□ -1.45
TRAPPC13-212ENST00000520525 LCE1DQ5T752 114 aa6.02□□□□□ -1.45
TRAPPC13-212ENST00000520525 ELMSAN1Q6PJG2 1045 aa6.02□□□□□ -1.45
TRAPPC13-212ENST00000520525 IGF2-ASQ6U949 168 aa6.02□□□□□ -1.45
TRAPPC13-212ENST00000520525 TTC9Q92623 222 aa6.02□□□□□ -1.45
TRAPPC13-212ENST00000520525 SMG9Q9H0W8 520 aaKnown RBP6.02□□□□□ -1.45
TRAPPC13-212ENST00000520525 SEPT3Q9UH03 358 aa6.02□□□□□ -1.45
TRAPPC13-212ENST00000520525 CARNS1A5YM72 827 aa6.01□□□□□ -1.45
TRAPPC13-212ENST00000520525 YBX3P16989 372 aaKnown RBP eCLIP6.01□□□□□ -1.45
TRAPPC13-212ENST00000520525 EIF2AK2P19525 551 aaKnown RBP6.01□□□□□ -1.45
TRAPPC13-212ENST00000520525 SSTR4P31391 388 aa6.01□□□□□ -1.45
TRAPPC13-212ENST00000520525 SOX18P35713 384 aa6.01□□□□□ -1.45
TRAPPC13-212ENST00000520525 SCNN1AP37088 669 aa6.01□□□□□ -1.45
TRAPPC13-212ENST00000520525 ZAP70P43403 619 aa6.01□□□□□ -1.45
TRAPPC13-212ENST00000520525 NLRP13Q86W25 1043 aa6.01□□□□□ -1.45
TRAPPC13-212ENST00000520525 NSUN5Q96P11 429 aaKnown RBP6.01□□□□□ -1.45
TRAPPC13-212ENST00000520525 STIM2Q9P246 746 aa6.01□□□□□ -1.45
TRAPPC13-212ENST00000520525 LOC102724428A0A0B4J2F2 783 aa6□□□□□ -1.45
TRAPPC13-212ENST00000520525 J3QW42 95 aa6□□□□□ -1.45
TRAPPC13-212ENST00000520525 PSAPP07602 524 aa6□□□□□ -1.45
TRAPPC13-212ENST00000520525 FSTP19883 344 aa6□□□□□ -1.45
TRAPPC13-212ENST00000520525 ARID4AP29374 1257 aaPredicted RBP6□□□□□ -1.45
TRAPPC13-212ENST00000520525 SIK1P57059 783 aa6□□□□□ -1.45
TRAPPC13-212ENST00000520525 PDE4CQ08493 712 aa6□□□□□ -1.45
TRAPPC13-212ENST00000520525 UBAP1LF5GYI3 381 aa5.99□□□□□ -1.45
TRAPPC13-212ENST00000520525 DEAF1O75398 565 aaPredicted RBP5.99□□□□□ -1.45
TRAPPC13-212ENST00000520525 CD97P48960 835 aa5.99□□□□□ -1.45
TRAPPC13-212ENST00000520525 DZIP1LQ8IYY4 767 aaKnown RBP5.99□□□□□ -1.45
TRAPPC13-212ENST00000520525 GPR152Q8TDT2 470 aa5.99□□□□□ -1.45
TRAPPC13-212ENST00000520525 PIK3R5Q8WYR1 880 aa5.99□□□□□ -1.45
TRAPPC13-212ENST00000520525 PLD4Q96BZ4 506 aa5.99□□□□□ -1.45
TRAPPC13-212ENST00000520525 TRAIPQ9BWF2 469 aa5.99□□□□□ -1.45
TRAPPC13-212ENST00000520525 DLL1O00548 723 aa5.98□□□□□ -1.45
TRAPPC13-212ENST00000520525 MED26O95402 600 aa5.98□□□□□ -1.45
TRAPPC13-212ENST00000520525 PDIA4P13667 645 aaKnown RBP5.98□□□□□ -1.45
TRAPPC13-212ENST00000520525 TAL1P17542 331 aaPredicted RBP5.98□□□□□ -1.45
TRAPPC13-212ENST00000520525 IRAK1P51617 712 aa5.98□□□□□ -1.45
TRAPPC13-212ENST00000520525 COL13A1Q5TAT6 717 aaPredicted RBP5.98□□□□□ -1.45
TRAPPC13-212ENST00000520525 ATCAYQ86WG3 371 aa5.98□□□□□ -1.45
TRAPPC13-212ENST00000520525 WFDC8Q8IUA0 241 aa5.98□□□□□ -1.45
TRAPPC13-212ENST00000520525 ABTB2Q8N961 1025 aa5.98□□□□□ -1.45
TRAPPC13-212ENST00000520525 OR13H1Q8NG92 308 aa5.98□□□□□ -1.45
TRAPPC13-212ENST00000520525 HELQQ8TDG4 1101 aa5.98□□□□□ -1.45
TRAPPC13-212ENST00000520525 FAM13BQ9NYF5 915 aa5.98□□□□□ -1.45
TRAPPC13-212ENST00000520525 OAS3Q9Y6K5 1087 aaKnown RBP5.97□□□□□ -1.45
TRAPPC13-212ENST00000520525 ALX3O95076 343 aa5.96□□□□□ -1.46
TRAPPC13-212ENST00000520525 GHRHP01286 108 aa5.96□□□□□ -1.46
TRAPPC13-212ENST00000520525 SSFA2P28290 1259 aa5.96□□□□□ -1.46
TRAPPC13-212ENST00000520525 TMEM130Q8N3G9 435 aa5.96□□□□□ -1.46
TRAPPC13-212ENST00000520525 AKTIPQ9H8T0 292 aa5.96□□□□□ -1.46
TRAPPC13-212ENST00000520525 TRIM33Q9UPN9 1127 aa5.96□□□□□ -1.46
TRAPPC13-212ENST00000520525 KIF4AO95239 1232 aa5.95□□□□□ -1.46
TRAPPC13-212ENST00000520525 CYP2E1P05181 493 aaPredicted RBP5.95□□□□□ -1.46
TRAPPC13-212ENST00000520525 ATP11AP98196 1134 aa5.95□□□□□ -1.46
TRAPPC13-212ENST00000520525 FZD5Q13467 585 aa5.95□□□□□ -1.46
TRAPPC13-212ENST00000520525 GDF6Q6KF10 455 aaPredicted RBP5.95□□□□□ -1.46
TRAPPC13-212ENST00000520525 ADAMTSL4Q6UY14 1074 aa5.95□□□□□ -1.46
TRAPPC13-212ENST00000520525 NUDT16Q96DE0 195 aaKnown RBP5.95□□□□□ -1.46
TRAPPC13-212ENST00000520525 ABI2Q9NYB9 513 aaPredicted RBP5.95□□□□□ -1.46
TRAPPC13-212ENST00000520525 TMEM63CQ9P1W3 806 aa5.95□□□□□ -1.46
TRAPPC13-212ENST00000520525 FNDC3AQ9Y2H6 1198 aaKnown RBP5.95□□□□□ -1.46
TRAPPC13-212ENST00000520525 KIAA1324LA8MWY0 1029 aaPredicted RBP5.94□□□□□ -1.46
TRAPPC13-212ENST00000520525 HYAL2Q12891 473 aa5.94□□□□□ -1.46
TRAPPC13-212ENST00000520525 MTMR3Q13615 1198 aa5.94□□□□□ -1.46
TRAPPC13-212ENST00000520525 PHLDB3Q6NSJ2 640 aa5.94□□□□□ -1.46
TRAPPC13-212ENST00000520525 IL22RA1Q8N6P7 574 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 265.5 ms