RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 FAM13AO94988 1023 aa5.98□□□□□ -1.45
HMGB1P41-201ENST00000520234 NPR3P17342 541 aa5.98□□□□□ -1.45
HMGB1P41-201ENST00000520234 SERPINB4P48594 390 aa5.98□□□□□ -1.45
HMGB1P41-201ENST00000520234 LCE5AQ5TCM9 118 aa5.98□□□□□ -1.45
HMGB1P41-201ENST00000520234 LRRC69Q6ZNQ3 347 aa5.98□□□□□ -1.45
HMGB1P41-201ENST00000520234 MED26O95402 600 aa5.97□□□□□ -1.45
HMGB1P41-201ENST00000520234 IREB2P48200 963 aaKnown RBP5.97□□□□□ -1.45
HMGB1P41-201ENST00000520234 ALKBH2Q6NS38 261 aa5.97□□□□□ -1.45
HMGB1P41-201ENST00000520234 POU5F2Q8N7G0 328 aa5.97□□□□□ -1.45
HMGB1P41-201ENST00000520234 ZNF280CQ8ND82 737 aa5.97□□□□□ -1.45
HMGB1P41-201ENST00000520234 FAM13BQ9NYF5 915 aa5.97□□□□□ -1.45
HMGB1P41-201ENST00000520234 BCS1LQ9Y276 419 aa5.97□□□□□ -1.45
HMGB1P41-201ENST00000520234 SOWAHDA6NJG2 315 aa5.96□□□□□ -1.46
HMGB1P41-201ENST00000520234 MICAL2O94851 1124 aa5.96□□□□□ -1.46
HMGB1P41-201ENST00000520234 NOS3P29474 1203 aa5.96□□□□□ -1.46
HMGB1P41-201ENST00000520234 ZNF211Q13398 564 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P41-201ENST00000520234 NEUROD1Q13562 356 aa5.96□□□□□ -1.46
HMGB1P41-201ENST00000520234 BTLAQ7Z6A9 289 aa5.96□□□□□ -1.46
HMGB1P41-201ENST00000520234 GLYCTKQ8IVS8 523 aa5.96□□□□□ -1.46
HMGB1P41-201ENST00000520234 HSH2DQ96JZ2 352 aa5.96□□□□□ -1.46
HMGB1P41-201ENST00000520234 DMGDHQ9UI17 866 aaKnown RBP5.96□□□□□ -1.46
HMGB1P41-201ENST00000520234 H3BRB1 525 aa5.95□□□□□ -1.46
HMGB1P41-201ENST00000520234 GSC2O15499 205 aa5.95□□□□□ -1.46
HMGB1P41-201ENST00000520234 EPB42P16452 691 aa5.95□□□□□ -1.46
HMGB1P41-201ENST00000520234 FBLN7Q53RD9 439 aa5.95□□□□□ -1.46
HMGB1P41-201ENST00000520234 NOM1Q5C9Z4 860 aaKnown RBP5.95□□□□□ -1.46
HMGB1P41-201ENST00000520234 TREML1Q86YW5 311 aa5.95□□□□□ -1.46
HMGB1P41-201ENST00000520234 ETFBKMTQ8IXQ9 262 aa5.95□□□□□ -1.46
HMGB1P41-201ENST00000520234 MEGF10Q96KG7 1140 aa5.95□□□□□ -1.46
HMGB1P41-201ENST00000520234 CEP63Q96MT8 703 aa5.95□□□□□ -1.46
HMGB1P41-201ENST00000520234 TUT1Q9H6E5 874 aaKnown RBP5.95□□□□□ -1.46
HMGB1P41-201ENST00000520234 C11orf16Q9NQ32 467 aa5.95□□□□□ -1.46
HMGB1P41-201ENST00000520234 ARSDP51689 593 aa5.94□□□□□ -1.46
HMGB1P41-201ENST00000520234 TYRO3Q06418 890 aa5.94□□□□□ -1.46
HMGB1P41-201ENST00000520234 MTMR3Q13615 1198 aa5.94□□□□□ -1.46
HMGB1P41-201ENST00000520234 ANO2Q9NQ90 1003 aa5.94□□□□□ -1.46
HMGB1P41-201ENST00000520234 ADGRE2Q9UHX3 823 aa5.94□□□□□ -1.46
HMGB1P41-201ENST00000520234 OPLAHO14841 1288 aa5.93□□□□□ -1.46
HMGB1P41-201ENST00000520234 SPINK2P20155 84 aa5.93□□□□□ -1.46
HMGB1P41-201ENST00000520234 MPSTP25325 297 aa5.93□□□□□ -1.46
HMGB1P41-201ENST00000520234 INPP5BP32019 993 aa5.93□□□□□ -1.46
HMGB1P41-201ENST00000520234 ZAP70P43403 619 aa5.93□□□□□ -1.46
HMGB1P41-201ENST00000520234 EIF1AXP47813 144 aaKnown RBP5.93□□□□□ -1.46
HMGB1P41-201ENST00000520234 IDH3AP50213 366 aa5.93□□□□□ -1.46
HMGB1P41-201ENST00000520234 KCNQ4P56696 695 aa5.93□□□□□ -1.46
HMGB1P41-201ENST00000520234 SND1Q7KZF4 910 aaKnown RBP eCLIP5.93□□□□□ -1.46
HMGB1P41-201ENST00000520234 PIK3R5Q8WYR1 880 aa5.93□□□□□ -1.46
HMGB1P41-201ENST00000520234 BRD7Q9NPI1 651 aa5.93□□□□□ -1.46
HMGB1P41-201ENST00000520234 ZBTB39O15060 712 aa5.92□□□□□ -1.46
HMGB1P41-201ENST00000520234 ADAMTS4O75173 837 aa5.92□□□□□ -1.46
HMGB1P41-201ENST00000520234 RPLP1P05386 114 aaKnown RBP5.92□□□□□ -1.46
HMGB1P41-201ENST00000520234 AAMPQ13685 434 aa5.92□□□□□ -1.46
HMGB1P41-201ENST00000520234 FAM26DQ5JW98 314 aa5.92□□□□□ -1.46
HMGB1P41-201ENST00000520234 INTS5Q6P9B9 1019 aaKnown RBP5.92□□□□□ -1.46
HMGB1P41-201ENST00000520234 ILDR2Q71H61 639 aa5.92□□□□□ -1.46
HMGB1P41-201ENST00000520234 DTWD1Q8N5C7 304 aa5.92□□□□□ -1.46
HMGB1P41-201ENST00000520234 SLC30A3Q99726 388 aa5.92□□□□□ -1.46
HMGB1P41-201ENST00000520234 EFCC1Q9HA90 598 aa5.92□□□□□ -1.46
HMGB1P41-201ENST00000520234 JPH1Q9HDC5 661 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P41-201ENST00000520234 BIN2Q9UBW5 565 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P41-201ENST00000520234 KCNH4Q9UQ05 1017 aa5.92□□□□□ -1.46
HMGB1P41-201ENST00000520234 TGFB1P01137 390 aa5.91□□□□□ -1.46
HMGB1P41-201ENST00000520234 PCSK2P16519 638 aa5.91□□□□□ -1.46
HMGB1P41-201ENST00000520234 MZF1P28698 734 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P41-201ENST00000520234 GRIK1P39086 918 aa5.91□□□□□ -1.46
HMGB1P41-201ENST00000520234 USP5P45974 858 aa5.91□□□□□ -1.46
HMGB1P41-201ENST00000520234 ARHGAP4P98171 946 aa5.91□□□□□ -1.46
HMGB1P41-201ENST00000520234 ECM1Q16610 540 aa5.91□□□□□ -1.46
HMGB1P41-201ENST00000520234 DZIP1LQ8IYY4 767 aaKnown RBP5.91□□□□□ -1.46
HMGB1P41-201ENST00000520234 CITED4Q96RK1 184 aa5.91□□□□□ -1.46
HMGB1P41-201ENST00000520234 GZF1Q9H116 711 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P41-201ENST00000520234 FNDC3AQ9Y2H6 1198 aaKnown RBP5.91□□□□□ -1.46
HMGB1P41-201ENST00000520234 RTCBQ9Y3I0 505 aaKnown RBP5.91□□□□□ -1.46
HMGB1P41-201ENST00000520234 NDUFB5O43674 189 aa5.9□□□□□ -1.46
HMGB1P41-201ENST00000520234 TRIM26Q12899 539 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P41-201ENST00000520234 FBXO11Q86XK2 927 aa5.9□□□□□ -1.46
HMGB1P41-201ENST00000520234 KRTAP9-8Q9BYQ0 159 aa5.9□□□□□ -1.46
HMGB1P41-201ENST00000520234 BRPF3Q9ULD4 1205 aa5.9□□□□□ -1.46
HMGB1P41-201ENST00000520234 WNT11O96014 354 aa5.89□□□□□ -1.47
HMGB1P41-201ENST00000520234 EGFRP00533 1210 aa5.89□□□□□ -1.47
HMGB1P41-201ENST00000520234 IGLV1-40P01703 118 aa5.89□□□□□ -1.47
HMGB1P41-201ENST00000520234 AFF1P51825 1210 aaKnown RBP5.89□□□□□ -1.47
HMGB1P41-201ENST00000520234 SPEM2Q0P670 501 aa5.89□□□□□ -1.47
HMGB1P41-201ENST00000520234 SFSWAPQ12872 951 aaKnown RBP5.89□□□□□ -1.47
HMGB1P41-201ENST00000520234 IGF2-ASQ6U949 168 aa5.89□□□□□ -1.47
HMGB1P41-201ENST00000520234 DTX1Q86Y01 620 aa5.89□□□□□ -1.47
HMGB1P41-201ENST00000520234 DMRTC2Q8IXT2 367 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P41-201ENST00000520234 RGL4Q8IZJ4 473 aa5.89□□□□□ -1.47
HMGB1P41-201ENST00000520234 TTC16Q8NEE8 873 aa5.89□□□□□ -1.47
HMGB1P41-201ENST00000520234 KRTAP9-7A8MTY7 169 aa5.88□□□□□ -1.47
HMGB1P41-201ENST00000520234 FZD6O60353 706 aa5.88□□□□□ -1.47
HMGB1P41-201ENST00000520234 PDGFAP04085 211 aa5.88□□□□□ -1.47
HMGB1P41-201ENST00000520234 DNM1Q05193 864 aaKnown RBP5.88□□□□□ -1.47
HMGB1P41-201ENST00000520234 EHHADHQ08426 723 aa5.88□□□□□ -1.47
HMGB1P41-201ENST00000520234 CCINQ13939 588 aa5.88□□□□□ -1.47
HMGB1P41-201ENST00000520234 SPOCD1Q6ZMY3 1216 aa5.88□□□□□ -1.47
HMGB1P41-201ENST00000520234 ATCAYQ86WG3 371 aa5.88□□□□□ -1.47
HMGB1P41-201ENST00000520234 CMTR1Q8N1G2 835 aaKnown RBP5.88□□□□□ -1.47
HMGB1P41-201ENST00000520234 GPR152Q8TDT2 470 aa5.88□□□□□ -1.47
HMGB1P41-201ENST00000520234 EDEM1Q92611 657 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms