RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 GOLIM4O00461 696 aa32.45■■■□□ 2.79
COL13A1-212ENST00000520133 FRAT2O75474 233 aaPredicted RBP32.45■■■□□ 2.79
COL13A1-212ENST00000520133 MAP4K1Q92918 833 aa32.45■■■□□ 2.79
COL13A1-212ENST00000520133 NARFQ9UHQ1 456 aa32.45■■■□□ 2.79
COL13A1-212ENST00000520133 GNPATO15228 680 aa32.44■■■□□ 2.78
COL13A1-212ENST00000520133 MROH5Q6ZUA9 1318 aa32.44■■■□□ 2.78
COL13A1-212ENST00000520133 RTL9Q8NET4 1388 aa32.44■■■□□ 2.78
COL13A1-212ENST00000520133 ABCC12Q96J65 1359 aa32.44■■■□□ 2.78
COL13A1-212ENST00000520133 KCNJ4P48050 445 aa32.44■■■□□ 2.78
COL13A1-212ENST00000520133 BCL11BQ9C0K0 894 aaPredicted RBP32.44■■■□□ 2.78
COL13A1-212ENST00000520133 FOXD4L1Q9NU39 408 aa32.44■■■□□ 2.78
COL13A1-212ENST00000520133 RTCBQ9Y3I0 505 aaKnown RBP32.44■■■□□ 2.78
COL13A1-212ENST00000520133 PDE8BO95263 885 aa32.43■■■□□ 2.78
COL13A1-212ENST00000520133 ADORA1P30542 326 aa32.42■■■□□ 2.78
COL13A1-212ENST00000520133 VGLL2Q8N8G2 317 aa32.42■■■□□ 2.78
COL13A1-212ENST00000520133 KCNB2Q92953 911 aa32.42■■■□□ 2.78
COL13A1-212ENST00000520133 ZKSCAN1P17029 563 aaPredicted RBP32.42■■■□□ 2.78
COL13A1-212ENST00000520133 NECTIN1Q15223 517 aa32.42■■■□□ 2.78
COL13A1-212ENST00000520133 PRPF40BQ6NWY9 871 aaKnown RBP32.42■■■□□ 2.78
COL13A1-212ENST00000520133 MPHOSPH8Q99549 860 aa32.42■■■□□ 2.78
COL13A1-212ENST00000520133 RBM8AQ9Y5S9 174 aaKnown RBP32.42■■■□□ 2.78
COL13A1-212ENST00000520133 ZPR1O75312 459 aa32.41■■■□□ 2.78
COL13A1-212ENST00000520133 RASEFQ8IZ41 740 aa32.41■■■□□ 2.78
COL13A1-212ENST00000520133 UPF3BQ9BZI7 483 aaKnown RBP32.41■■■□□ 2.78
COL13A1-212ENST00000520133 LRRFIP1Q32MZ4 808 aaKnown RBP32.4■■■□□ 2.78
COL13A1-212ENST00000520133 MCMDC2Q4G0Z9 681 aa32.4■■■□□ 2.78
COL13A1-212ENST00000520133 RNF20Q5VTR2 975 aa32.4■■■□□ 2.78
COL13A1-212ENST00000520133 USPL1Q5W0Q7 1092 aa32.39■■■□□ 2.78
COL13A1-212ENST00000520133 CWC22Q9HCG8 908 aaKnown RBP32.39■■■□□ 2.78
COL13A1-212ENST00000520133 IGHMBP2P38935 993 aaKnown RBP32.38■■■□□ 2.77
COL13A1-212ENST00000520133 ZNF589Q86UQ0 364 aaPredicted RBP32.38■■■□□ 2.77
COL13A1-212ENST00000520133 C4BP0C0L5 1744 aa32.38■■■□□ 2.77
COL13A1-212ENST00000520133 PUM3Q15397 648 aaKnown RBP32.37■■■□□ 2.77
COL13A1-212ENST00000520133 TMX3Q96JJ7 454 aa32.37■■■□□ 2.77
COL13A1-212ENST00000520133 BCL2L12Q9HB09 334 aa32.37■■■□□ 2.77
COL13A1-212ENST00000520133 HELLSQ9NRZ9 838 aa32.37■■■□□ 2.77
COL13A1-212ENST00000520133 TAF5LO75529 589 aa32.37■■■□□ 2.77
COL13A1-212ENST00000520133 FKBP4Q02790 459 aaKnown RBP eCLIP32.37■■■□□ 2.77
COL13A1-212ENST00000520133 CREB3L3Q68CJ9 461 aa32.37■■■□□ 2.77
COL13A1-212ENST00000520133 FAM196AQ6ZSG2 479 aa32.37■■■□□ 2.77
COL13A1-212ENST00000520133 ZNF512BQ96KM6 892 aaPredicted RBP32.37■■■□□ 2.77
COL13A1-212ENST00000520133 TM6SF1Q9BZW5 370 aa32.37■■■□□ 2.77
COL13A1-212ENST00000520133 NYXQ9GZU5 481 aa32.37■■■□□ 2.77
COL13A1-212ENST00000520133 SEC31BQ9NQW1 1179 aa32.37■■■□□ 2.77
COL13A1-212ENST00000520133 TBC1D9BQ66K14 1250 aa32.36■■■□□ 2.77
COL13A1-212ENST00000520133 BRWD3Q6RI45 1802 aa32.36■■■□□ 2.77
COL13A1-212ENST00000520133 GTF2E1P29083 439 aaPredicted RBP32.35■■■□□ 2.77
COL13A1-212ENST00000520133 ERFEQ4G0M1 354 aa32.35■■■□□ 2.77
COL13A1-212ENST00000520133 BICDL1Q6ZP65 573 aa32.35■■■□□ 2.77
COL13A1-212ENST00000520133 LPIN2Q92539 896 aa32.35■■■□□ 2.77
COL13A1-212ENST00000520133 SETDB2Q96T68 719 aa32.35■■■□□ 2.77
COL13A1-212ENST00000520133 CDC5LQ99459 802 aaKnown RBP32.35■■■□□ 2.77
COL13A1-212ENST00000520133 HMG20BQ9P0W2 317 aa32.35■■■□□ 2.77
COL13A1-212ENST00000520133 ARAP2Q8WZ64 1704 aa32.35■■■□□ 2.77
COL13A1-212ENST00000520133 SSFA2P28290 1259 aa32.34■■■□□ 2.77
COL13A1-212ENST00000520133 RAB3GAP1Q15042 981 aa32.34■■■□□ 2.77
COL13A1-212ENST00000520133 KRT27Q7Z3Y8 459 aa32.34■■■□□ 2.77
COL13A1-212ENST00000520133 RNF113AO15541 343 aaKnown RBP32.33■■■□□ 2.77
COL13A1-212ENST00000520133 CASTP20810 708 aaKnown RBP32.33■■■□□ 2.77
COL13A1-212ENST00000520133 ARHGEF1Q92888 912 aaKnown RBP32.33■■■□□ 2.77
COL13A1-212ENST00000520133 SRP68Q9UHB9 627 aaKnown RBP32.33■■■□□ 2.77
COL13A1-212ENST00000520133 AKAP11Q9UKA4 1901 aa32.33■■■□□ 2.77
COL13A1-212ENST00000520133 COL24A1Q17RW2 1714 aa32.33■■■□□ 2.77
COL13A1-212ENST00000520133 SLC27A2O14975 620 aa32.33■■■□□ 2.77
COL13A1-212ENST00000520133 SF3B3Q15393 1217 aaKnown RBP32.33■■■□□ 2.77
COL13A1-212ENST00000520133 SMIM5Q71RC9 77 aa32.33■■■□□ 2.77
COL13A1-212ENST00000520133 CASZ1Q86V15 1759 aa32.32■■■□□ 2.76
COL13A1-212ENST00000520133 MYH7P12883 1935 aa32.32■■■□□ 2.76
COL13A1-212ENST00000520133 FGFR2P21802 821 aa32.32■■■□□ 2.76
COL13A1-212ENST00000520133 SLC10A5Q5PT55 438 aa32.32■■■□□ 2.76
COL13A1-212ENST00000520133 ZMYM1Q5SVZ6 1142 aa32.32■■■□□ 2.76
COL13A1-212ENST00000520133 JAKMIP1Q96N16 626 aaKnown RBP32.32■■■□□ 2.76
COL13A1-212ENST00000520133 ZFYP08048 801 aaPredicted RBP32.31■■■□□ 2.76
COL13A1-212ENST00000520133 SLC5A1P13866 664 aa32.31■■■□□ 2.76
COL13A1-212ENST00000520133 PSMA5P28066 241 aa32.31■■■□□ 2.76
COL13A1-212ENST00000520133 TRAPPC3LQ5T215 181 aa32.31■■■□□ 2.76
COL13A1-212ENST00000520133 TTC14Q96N46 770 aa32.31■■■□□ 2.76
COL13A1-212ENST00000520133 UQCRFS1P1P0C7P4 283 aa32.3■■■□□ 2.76
COL13A1-212ENST00000520133 CUL4AQ13619 759 aa32.3■■■□□ 2.76
COL13A1-212ENST00000520133 SEC62Q99442 399 aaKnown RBP32.3■■■□□ 2.76
COL13A1-212ENST00000520133 ZSWIM6Q9HCJ5 1215 aa32.3■■■□□ 2.76
COL13A1-212ENST00000520133 CYP46A1Q9Y6A2 500 aa32.3■■■□□ 2.76
COL13A1-212ENST00000520133 U3KPZ7 1027 aaPredicted RBP32.3■■■□□ 2.76
COL13A1-212ENST00000520133 C4AP0C0L4 1744 aa32.3■■■□□ 2.76
COL13A1-212ENST00000520133 RFC4P35249 363 aa32.3■■■□□ 2.76
COL13A1-212ENST00000520133 NUCB2P80303 420 aa32.3■■■□□ 2.76
COL13A1-212ENST00000520133 HELBQ8NG08 1087 aaPredicted RBP32.3■■■□□ 2.76
COL13A1-212ENST00000520133 ZAP70P43403 619 aa32.29■■■□□ 2.76
COL13A1-212ENST00000520133 SCARF1Q14162 830 aa32.29■■■□□ 2.76
COL13A1-212ENST00000520133 INTS4Q96HW7 963 aaKnown RBP32.29■■■□□ 2.76
COL13A1-212ENST00000520133 CHGBP05060 677 aa32.28■■■□□ 2.76
COL13A1-212ENST00000520133 CCDC129Q6ZRS4 1044 aa32.28■■■□□ 2.76
COL13A1-212ENST00000520133 NOL8Q76FK4 1167 aaKnown RBP32.28■■■□□ 2.76
COL13A1-212ENST00000520133 NBPF5PQ86XG9 351 aaPredicted RBP32.28■■■□□ 2.76
COL13A1-212ENST00000520133 TTF1Q15361 905 aaPredicted RBP32.28■■■□□ 2.76
COL13A1-212ENST00000520133 ADCK5Q3MIX3 580 aa32.28■■■□□ 2.76
COL13A1-212ENST00000520133 TSGA10IPQ3SY00 556 aa32.28■■■□□ 2.76
COL13A1-212ENST00000520133 VPS53Q5VIR6 699 aa32.28■■■□□ 2.76
COL13A1-212ENST00000520133 CCDC102BQ68D86 513 aa32.28■■■□□ 2.76
COL13A1-212ENST00000520133 ADRA2BP18089 450 aa32.27■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms