RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 PRR12Q9ULL5 1215 aa9.58□□□□□ -0.88
CLK4-202ENST00000519132 FAN1Q9Y2M0 1017 aa9.58□□□□□ -0.88
CLK4-202ENST00000519132 IL2RAP01589 272 aa9.58□□□□□ -0.88
CLK4-202ENST00000519132 PDE6BP35913 854 aa9.58□□□□□ -0.88
CLK4-202ENST00000519132 IRF2BPLQ9H1B7 796 aa9.58□□□□□ -0.88
CLK4-202ENST00000519132 NAIPQ13075 1403 aa9.58□□□□□ -0.88
CLK4-202ENST00000519132 SSBP05455 408 aaKnown RBP eCLIP9.57□□□□□ -0.88
CLK4-202ENST00000519132 XRCC5P13010 732 aaKnown RBP9.57□□□□□ -0.88
CLK4-202ENST00000519132 ADGRD1Q6QNK2 874 aa9.57□□□□□ -0.88
CLK4-202ENST00000519132 IFT43Q96FT9 208 aa9.57□□□□□ -0.88
CLK4-202ENST00000519132 LILRA1O75019 489 aa9.57□□□□□ -0.88
CLK4-202ENST00000519132 RASA3Q14644 834 aa9.57□□□□□ -0.88
CLK4-202ENST00000519132 MAP3K11Q16584 847 aa9.57□□□□□ -0.88
CLK4-202ENST00000519132 TKFCQ3LXA3 575 aa9.57□□□□□ -0.88
CLK4-202ENST00000519132 ANAPC16Q96DE5 110 aa9.57□□□□□ -0.88
CLK4-202ENST00000519132 TSR3Q9UJK0 312 aaKnown RBP9.57□□□□□ -0.88
CLK4-202ENST00000519132 ADGRL1O94910 1474 aa9.56□□□□□ -0.88
CLK4-202ENST00000519132 ITGAEP38570 1179 aa9.56□□□□□ -0.88
CLK4-202ENST00000519132 SKOR1P84550 965 aa9.56□□□□□ -0.88
CLK4-202ENST00000519132 PTPN12Q05209 780 aaKnown RBP9.56□□□□□ -0.88
CLK4-202ENST00000519132 LILRB2Q8N423 598 aa9.56□□□□□ -0.88
CLK4-202ENST00000519132 PRR14Q9BWN1 585 aa9.56□□□□□ -0.88
CLK4-202ENST00000519132 C12orf49Q9H741 205 aa9.56□□□□□ -0.88
CLK4-202ENST00000519132 GINM1Q9NU53 330 aa9.56□□□□□ -0.88
CLK4-202ENST00000519132 NCOA1Q15788 1441 aa9.56□□□□□ -0.88
CLK4-202ENST00000519132 C9orf84Q5VXU9 1444 aa9.56□□□□□ -0.88
CLK4-202ENST00000519132 USP31Q70CQ4 1352 aa9.56□□□□□ -0.88
CLK4-202ENST00000519132 TPD52L2O43399 206 aaKnown RBP9.56□□□□□ -0.88
CLK4-202ENST00000519132 ZPR1O75312 459 aa9.56□□□□□ -0.88
CLK4-202ENST00000519132 EXOC8Q8IYI6 725 aa9.56□□□□□ -0.88
CLK4-202ENST00000519132 SH3TC2Q8TF17 1288 aa9.56□□□□□ -0.88
CLK4-202ENST00000519132 CCDC74AQ96AQ1 378 aa9.56□□□□□ -0.88
CLK4-202ENST00000519132 ST7Q9NRC1 585 aa9.56□□□□□ -0.88
CLK4-202ENST00000519132 BACH1O14867 736 aa9.56□□□□□ -0.88
CLK4-202ENST00000519132 SMTNP53814 917 aa9.56□□□□□ -0.88
CLK4-202ENST00000519132 FAM160A1Q05DH4 1040 aa9.56□□□□□ -0.88
CLK4-202ENST00000519132 ERMP1Q7Z2K6 904 aa9.56□□□□□ -0.88
CLK4-202ENST00000519132 CKAP2LQ8IYA6 745 aa9.56□□□□□ -0.88
CLK4-202ENST00000519132 SEPT12Q8IYM1 358 aa9.56□□□□□ -0.88
CLK4-202ENST00000519132 ANKK1Q8NFD2 765 aa9.56□□□□□ -0.88
CLK4-202ENST00000519132 SPG7Q9UQ90 795 aa9.56□□□□□ -0.88
CLK4-202ENST00000519132 INO80Q9ULG1 1556 aaPredicted RBP9.56□□□□□ -0.88
CLK4-202ENST00000519132 KDM5CP41229 1560 aa9.55□□□□□ -0.88
CLK4-202ENST00000519132 ESYT3A0FGR9 886 aa9.55□□□□□ -0.88
CLK4-202ENST00000519132 FAM205CA6NFA0 338 aa9.55□□□□□ -0.88
CLK4-202ENST00000519132 PSMA6P60900 246 aaKnown RBP9.55□□□□□ -0.88
CLK4-202ENST00000519132 PLA2G2CQ5R387 149 aa9.55□□□□□ -0.88
CLK4-202ENST00000519132 FAM169BQ8N8A8 192 aa9.55□□□□□ -0.88
CLK4-202ENST00000519132 EMID1Q96A84 441 aaPredicted RBP9.55□□□□□ -0.88
CLK4-202ENST00000519132 SLC4A9Q96Q91 983 aa9.55□□□□□ -0.88
CLK4-202ENST00000519132 SPON2Q9BUD6 331 aa9.55□□□□□ -0.88
CLK4-202ENST00000519132 TLR6Q9Y2C9 796 aa9.55□□□□□ -0.88
CLK4-202ENST00000519132 TEX14Q8IWB6 1497 aa9.55□□□□□ -0.88
CLK4-202ENST00000519132 RTEL1-TNFRSF6BF6WH68 1400 aa9.55□□□□□ -0.88
CLK4-202ENST00000519132 RAB3GAP2Q9H2M9 1393 aa9.55□□□□□ -0.88
CLK4-202ENST00000519132 TAF1CQ15572 869 aaPredicted RBP9.55□□□□□ -0.88
CLK4-202ENST00000519132 C21orf62-AS1Q17RA5 79 aa9.55□□□□□ -0.88
CLK4-202ENST00000519132 L3MBTL2Q969R5 705 aa9.55□□□□□ -0.88
CLK4-202ENST00000519132 ANKRD30AQ9BXX3 1397 aa9.55□□□□□ -0.88
CLK4-202ENST00000519132 ADH1BP00325 375 aa9.54□□□□□ -0.88
CLK4-202ENST00000519132 IBSPP21815 317 aaPredicted RBP9.54□□□□□ -0.88
CLK4-202ENST00000519132 TRIP4Q15650 581 aaPredicted RBP9.54□□□□□ -0.88
CLK4-202ENST00000519132 VPS37DQ86XT2 251 aa9.54□□□□□ -0.88
CLK4-202ENST00000519132 ABTB2Q8N961 1025 aa9.54□□□□□ -0.88
CLK4-202ENST00000519132 RICTORQ6R327 1708 aa9.54□□□□□ -0.88
CLK4-202ENST00000519132 HNRNPMP52272 730 aaKnown RBP eCLIP9.54□□□□□ -0.88
CLK4-202ENST00000519132 RNF187Q5TA31 235 aaPredicted RBP9.54□□□□□ -0.88
CLK4-202ENST00000519132 ESF1Q9H501 851 aaKnown RBP9.54□□□□□ -0.88
CLK4-202ENST00000519132 UBP1Q9NZI7 540 aa9.54□□□□□ -0.88
CLK4-202ENST00000519132 ZFYVE16Q7Z3T8 1539 aa9.54□□□□□ -0.88
CLK4-202ENST00000519132 ZNF518AQ6AHZ1 1483 aa9.54□□□□□ -0.88
CLK4-202ENST00000519132 TSPOAP1O95153 1857 aa9.54□□□□□ -0.88
CLK4-202ENST00000519132 TSPY4P0CV99 314 aa9.53□□□□□ -0.88
CLK4-202ENST00000519132 TSPY10P0CW01 314 aa9.53□□□□□ -0.88
CLK4-202ENST00000519132 TLR1Q15399 786 aa9.53□□□□□ -0.88
CLK4-202ENST00000519132 ZNF295-AS1Q8N0V1 137 aa9.53□□□□□ -0.88
CLK4-202ENST00000519132 TSR2Q969E8 191 aaKnown RBP9.53□□□□□ -0.88
CLK4-202ENST00000519132 MTRQ99707 1265 aa9.53□□□□□ -0.88
CLK4-202ENST00000519132 DDX56Q9NY93 547 aaKnown RBP9.53□□□□□ -0.88
CLK4-202ENST00000519132 TRAPPC8Q9Y2L5 1435 aa9.53□□□□□ -0.88
CLK4-202ENST00000519132 HRO43593 1189 aa9.53□□□□□ -0.88
CLK4-202ENST00000519132 GRM5P41594 1212 aa9.53□□□□□ -0.88
CLK4-202ENST00000519132 TICAM2Q86XR7 235 aa9.53□□□□□ -0.88
CLK4-202ENST00000519132 WNT2BQ93097 391 aa9.53□□□□□ -0.88
CLK4-202ENST00000519132 CNKSR1Q969H4 720 aa9.53□□□□□ -0.88
CLK4-202ENST00000519132 EAF1Q96JC9 268 aaPredicted RBP9.53□□□□□ -0.88
CLK4-202ENST00000519132 DNAJC7Q99615 494 aa9.53□□□□□ -0.88
CLK4-202ENST00000519132 PHACTR1Q9C0D0 580 aa9.53□□□□□ -0.88
CLK4-202ENST00000519132 SCAPERQ9BY12 1400 aa9.53□□□□□ -0.88
CLK4-202ENST00000519132 TNFRSF21O75509 655 aa9.53□□□□□ -0.88
CLK4-202ENST00000519132 CRKP46108 304 aa9.53□□□□□ -0.88
CLK4-202ENST00000519132 SEPT6Q14141 434 aa9.53□□□□□ -0.88
CLK4-202ENST00000519132 MYO19Q96H55 970 aa9.53□□□□□ -0.88
CLK4-202ENST00000519132 DEPDC7Q96QD5 511 aa9.53□□□□□ -0.88
CLK4-202ENST00000519132 SLC6A16Q9GZN6 736 aa9.53□□□□□ -0.88
CLK4-202ENST00000519132 PPT2Q9UMR5 302 aa9.53□□□□□ -0.88
CLK4-202ENST00000519132 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.53□□□□□ -0.88
CLK4-202ENST00000519132 POGZQ7Z3K3 1410 aa9.52□□□□□ -0.88
CLK4-202ENST00000519132 WASLO00401 505 aaPredicted RBP9.52□□□□□ -0.89
CLK4-202ENST00000519132 TXLNAP40222 546 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms