RNA–Protein interactions for RNA: ENST00000518815.1

MTCL1-207, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best) BASIC

Gene MTCL1, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-207ENST00000518815 IDH1O75874 414 aaKnown RBP11.89□□□□□ -0.51
MTCL1-207ENST00000518815 ATP5JP18859 108 aa11.89□□□□□ -0.51
MTCL1-207ENST00000518815 AMOTL1Q8IY63 956 aa11.89□□□□□ -0.51
MTCL1-207ENST00000518815 EAF2Q96CJ1 260 aaPredicted RBP11.89□□□□□ -0.51
MTCL1-207ENST00000518815 RBM27Q9P2N5 1060 aaKnown RBP11.89□□□□□ -0.51
MTCL1-207ENST00000518815 SLIT2O94813 1529 aa11.89□□□□□ -0.51
MTCL1-207ENST00000518815 MARCH6O60337 910 aa11.88□□□□□ -0.51
MTCL1-207ENST00000518815 PRIM1P49642 420 aaKnown RBP11.88□□□□□ -0.51
MTCL1-207ENST00000518815 USP48Q86UV5 1035 aa11.88□□□□□ -0.51
MTCL1-207ENST00000518815 LARP6Q9BRS8 491 aaKnown RBP11.88□□□□□ -0.51
MTCL1-207ENST00000518815 TEX13AQ9BXU3 409 aaPredicted RBP11.88□□□□□ -0.51
MTCL1-207ENST00000518815 TRMT112Q9UI30 125 aaKnown RBP11.88□□□□□ -0.51
MTCL1-207ENST00000518815 LRP6O75581 1613 aa11.88□□□□□ -0.51
MTCL1-207ENST00000518815 SHANK3Q9BYB0 1731 aa11.88□□□□□ -0.51
MTCL1-207ENST00000518815 RFX7Q2KHR2 1363 aa11.88□□□□□ -0.51
MTCL1-207ENST00000518815 GPT2Q8TD30 523 aa11.88□□□□□ -0.51
MTCL1-207ENST00000518815 CCDC34Q96HJ3 373 aa11.88□□□□□ -0.51
MTCL1-207ENST00000518815 UQCRHLA0A096LP55 91 aa11.88□□□□□ -0.51
MTCL1-207ENST00000518815 UQCRHP07919 91 aa11.88□□□□□ -0.51
MTCL1-207ENST00000518815 ATP2B1P20020 1258 aa11.88□□□□□ -0.51
MTCL1-207ENST00000518815 SYT1P21579 422 aa11.88□□□□□ -0.51
MTCL1-207ENST00000518815 MAP4K1Q92918 833 aa11.88□□□□□ -0.51
MTCL1-207ENST00000518815 TTC14Q96N46 770 aa11.88□□□□□ -0.51
MTCL1-207ENST00000518815 BECN2A8MW95 431 aa11.87□□□□□ -0.51
MTCL1-207ENST00000518815 IL15P40933 162 aaPredicted RBP11.87□□□□□ -0.51
MTCL1-207ENST00000518815 CEBPZQ03701 1054 aaKnown RBP11.87□□□□□ -0.51
MTCL1-207ENST00000518815 TNNI3KQ59H18 835 aa11.87□□□□□ -0.51
MTCL1-207ENST00000518815 FPGT-TNNI3KV9GXZ4 949 aa11.87□□□□□ -0.51
MTCL1-207ENST00000518815 N4BP2Q86UW6 1770 aaPredicted RBP11.87□□□□□ -0.51
MTCL1-207ENST00000518815 TMEM87AQ8NBN3 555 aa11.87□□□□□ -0.51
MTCL1-207ENST00000518815 ACSBG1Q96GR2 724 aa11.87□□□□□ -0.51
MTCL1-207ENST00000518815 SCAND2PQ9GZW5 306 aaPredicted RBP11.87□□□□□ -0.51
MTCL1-207ENST00000518815 ABCF2Q9UG63 623 aa11.87□□□□□ -0.51
MTCL1-207ENST00000518815 SLC27A2O14975 620 aa11.86□□□□□ -0.51
MTCL1-207ENST00000518815 SASH1O94885 1247 aa11.86□□□□□ -0.51
MTCL1-207ENST00000518815 IGKV5-2P06315 115 aa11.86□□□□□ -0.51
MTCL1-207ENST00000518815 TPM3P06753 285 aa11.86□□□□□ -0.51
MTCL1-207ENST00000518815 RASEFQ8IZ41 740 aa11.86□□□□□ -0.51
MTCL1-207ENST00000518815 AKAP2Q9Y2D5 859 aa11.86□□□□□ -0.51
MTCL1-207ENST00000518815 MCMDC2Q4G0Z9 681 aa11.86□□□□□ -0.51
MTCL1-207ENST00000518815 SAMD1Q6SPF0 538 aaPredicted RBP11.86□□□□□ -0.51
MTCL1-207ENST00000518815 RBSNQ9H1K0 784 aa11.86□□□□□ -0.51
MTCL1-207ENST00000518815 SNRKQ9NRH2 765 aa11.86□□□□□ -0.51
MTCL1-207ENST00000518815 TMEM63CQ9P1W3 806 aa11.86□□□□□ -0.51
MTCL1-207ENST00000518815 PRAMEF22A3QJZ6 481 aa11.86□□□□□ -0.51
MTCL1-207ENST00000518815 CLSTN1O94985 981 aa11.86□□□□□ -0.51
MTCL1-207ENST00000518815 IFIT5Q13325 482 aaKnown RBP11.86□□□□□ -0.51
MTCL1-207ENST00000518815 KCNB2Q92953 911 aa11.86□□□□□ -0.51
MTCL1-207ENST00000518815 PTH1RQ03431 593 aa11.86□□□□□ -0.51
MTCL1-207ENST00000518815 NECTIN1Q15223 517 aa11.86□□□□□ -0.51
MTCL1-207ENST00000518815 NEK1Q96PY6 1258 aa11.86□□□□□ -0.51
MTCL1-207ENST00000518815 SPATA31A1Q5TZJ5 1347 aa11.85□□□□□ -0.51
MTCL1-207ENST00000518815 GOLGA6L19H0YKK7 550 aa11.85□□□□□ -0.51
MTCL1-207ENST00000518815 RPS6KB1P23443 525 aa11.85□□□□□ -0.51
MTCL1-207ENST00000518815 BARGINQ6ZT62 677 aa11.85□□□□□ -0.51
MTCL1-207ENST00000518815 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.85□□□□□ -0.515e-6■■■■■ 34.6
MTCL1-207ENST00000518815 GPR108Q9NPR9 543 aa11.85□□□□□ -0.51
MTCL1-207ENST00000518815 CTNNA3Q9UI47 895 aa11.85□□□□□ -0.51
MTCL1-207ENST00000518815 USP16Q9Y5T5 823 aa11.85□□□□□ -0.51
MTCL1-207ENST00000518815 TNS2Q63HR2 1409 aa11.85□□□□□ -0.51
MTCL1-207ENST00000518815 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.85□□□□□ -0.51
MTCL1-207ENST00000518815 IFIT1P09914 478 aaKnown RBP11.85□□□□□ -0.51
MTCL1-207ENST00000518815 TFCP2Q12800 502 aa11.85□□□□□ -0.51
MTCL1-207ENST00000518815 PDIA6Q15084 440 aa11.85□□□□□ -0.51
MTCL1-207ENST00000518815 LMBR1LQ6UX01 489 aa11.85□□□□□ -0.51
MTCL1-207ENST00000518815 CCDC191Q8NCU4 936 aa11.85□□□□□ -0.51
MTCL1-207ENST00000518815 CCDC192P0DO97 292 aa11.85□□□□□ -0.51
MTCL1-207ENST00000518815 TPM4P67936 248 aa11.85□□□□□ -0.51
MTCL1-207ENST00000518815 ALDH8A1Q9H2A2 487 aaPredicted RBP11.85□□□□□ -0.51
MTCL1-207ENST00000518815 PAPPAQ13219 1627 aa11.84□□□□□ -0.51
MTCL1-207ENST00000518815 FAM227BQ96M60 508 aa11.84□□□□□ -0.51
MTCL1-207ENST00000518815 COL15A1P39059 1388 aa11.84□□□□□ -0.51
MTCL1-207ENST00000518815 TRIM34Q9BYJ4 488 aa11.84□□□□□ -0.51
MTCL1-207ENST00000518815 HELLSQ9NRZ9 838 aa11.84□□□□□ -0.51
MTCL1-207ENST00000518815 CNPY2Q9Y2B0 182 aa11.84□□□□□ -0.51
MTCL1-207ENST00000518815 SPATA31A5Q5VU36 1347 aa11.84□□□□□ -0.51
MTCL1-207ENST00000518815 SPATA31A7Q8IWB4 1347 aa11.84□□□□□ -0.51
MTCL1-207ENST00000518815 LRP2BPQ9P2M1 347 aa11.84□□□□□ -0.51
MTCL1-207ENST00000518815 CFAP45Q9UL16 551 aa11.84□□□□□ -0.51
MTCL1-207ENST00000518815 IGHMBP2P38935 993 aaKnown RBP11.83□□□□□ -0.52
MTCL1-207ENST00000518815 HMGN5P82970 282 aaKnown RBP11.83□□□□□ -0.52
MTCL1-207ENST00000518815 RABL6Q3YEC7 729 aaPredicted RBP11.83□□□□□ -0.52
MTCL1-207ENST00000518815 HSP90AB3PQ58FF7 597 aa11.83□□□□□ -0.52
MTCL1-207ENST00000518815 ZNF592Q92610 1267 aa11.83□□□□□ -0.52
MTCL1-207ENST00000518815 GDPD2Q9HCC8 539 aa11.83□□□□□ -0.52
MTCL1-207ENST00000518815 GNL3LQ9NVN8 582 aaKnown RBP11.83□□□□□ -0.52
MTCL1-207ENST00000518815 LAMB4A4D0S4 1761 aa11.83□□□□□ -0.52
MTCL1-207ENST00000518815 PES1O00541 588 aaKnown RBP11.83□□□□□ -0.52
MTCL1-207ENST00000518815 LDHAL6AQ6ZMR3 332 aa11.83□□□□□ -0.52
MTCL1-207ENST00000518815 FBXO3Q9UK99 471 aa11.83□□□□□ -0.52
MTCL1-207ENST00000518815 UBR2Q8IWV8 1755 aa11.83□□□□□ -0.52
MTCL1-207ENST00000518815 SAFBQ15424 915 aaKnown RBP eCLIP11.83□□□□□ -0.52
MTCL1-207ENST00000518815 FERMT3Q86UX7 667 aa11.83□□□□□ -0.52
MTCL1-207ENST00000518815 HAUS7Q99871 368 aa11.83□□□□□ -0.52
MTCL1-207ENST00000518815 ZFYP08048 801 aaPredicted RBP11.82□□□□□ -0.52
MTCL1-207ENST00000518815 ZSCAN25Q6NSZ9 544 aa11.82□□□□□ -0.52
MTCL1-207ENST00000518815 KBTBD3Q8NAB2 608 aa11.82□□□□□ -0.52
MTCL1-207ENST00000518815 DDX11Q96FC9 970 aa11.82□□□□□ -0.52
MTCL1-207ENST00000518815 ZSCAN16Q9H4T2 348 aaPredicted RBP11.82□□□□□ -0.52
MTCL1-207ENST00000518815 RAI14Q9P0K7 980 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms