RNA–Protein interactions for RNA: ENST00000517391.5

CPNE3-202, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 785 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-202ENST00000517391 GNA15P30679 374 aa8.54□□□□□ -1.04
CPNE3-202ENST00000517391 DOC2BQ14184 412 aa8.54□□□□□ -1.04
CPNE3-202ENST00000517391 LRRC69Q6ZNQ3 347 aa8.54□□□□□ -1.04
CPNE3-202ENST00000517391 CRISPLD1Q9H336 500 aa8.54□□□□□ -1.04
CPNE3-202ENST00000517391 GDF2Q9UK05 429 aaPredicted RBP8.54□□□□□ -1.04
CPNE3-202ENST00000517391 UBAP1LF5GYI3 381 aa8.53□□□□□ -1.04
CPNE3-202ENST00000517391 CHRNA4P43681 627 aa8.53□□□□□ -1.04
CPNE3-202ENST00000517391 ORC1Q13415 861 aa8.53□□□□□ -1.04
CPNE3-202ENST00000517391 LINC00114Q6XXX2 140 aa8.53□□□□□ -1.04
CPNE3-202ENST00000517391 CMTR1Q8N1G2 835 aaKnown RBP8.53□□□□□ -1.04
CPNE3-202ENST00000517391 TMEM87AQ8NBN3 555 aa8.53□□□□□ -1.04
CPNE3-202ENST00000517391 EDARADDQ8WWZ3 215 aa8.53□□□□□ -1.04
CPNE3-202ENST00000517391 SUV39H2Q9H5I1 410 aa8.53□□□□□ -1.04
CPNE3-202ENST00000517391 ZFP64Q9NPA5 681 aa8.53□□□□□ -1.04
CPNE3-202ENST00000517391 VTI1BQ9UEU0 232 aa8.53□□□□□ -1.04
CPNE3-202ENST00000517391 GNB5O14775 395 aa8.52□□□□□ -1.05
CPNE3-202ENST00000517391 GIPC1O14908 333 aa8.52□□□□□ -1.05
CPNE3-202ENST00000517391 EFHC2Q5JST6 749 aa8.52□□□□□ -1.05
CPNE3-202ENST00000517391 ZNF438Q7Z4V0 828 aa8.52□□□□□ -1.05
CPNE3-202ENST00000517391 NBPF11Q86T75 865 aa8.52□□□□□ -1.05
CPNE3-202ENST00000517391 NLRP8Q86W28 1048 aa8.52□□□□□ -1.05
CPNE3-202ENST00000517391 CEP63Q96MT8 703 aa8.52□□□□□ -1.05
CPNE3-202ENST00000517391 FAM161BQ96MY7 647 aa8.52□□□□□ -1.05
CPNE3-202ENST00000517391 SPG7Q9UQ90 795 aa8.52□□□□□ -1.05
CPNE3-202ENST00000517391 AK5Q9Y6K8 562 aa8.52□□□□□ -1.05
CPNE3-202ENST00000517391 TNFRSF21O75509 655 aa8.51□□□□□ -1.05
CPNE3-202ENST00000517391 ARTNQ5T4W7 220 aa8.51□□□□□ -1.05
CPNE3-202ENST00000517391 SNX29Q8TEQ0 813 aa8.51□□□□□ -1.05
CPNE3-202ENST00000517391 KLRG1Q96E93 195 aa8.51□□□□□ -1.05
CPNE3-202ENST00000517391 C8orf37Q96NL8 207 aa8.51□□□□□ -1.05
CPNE3-202ENST00000517391 SETDB2Q96T68 719 aa8.51□□□□□ -1.05
CPNE3-202ENST00000517391 ELP3Q9H9T3 547 aa8.51□□□□□ -1.05
CPNE3-202ENST00000517391 METTL5Q9NRN9 209 aaKnown RBP8.51□□□□□ -1.05
CPNE3-202ENST00000517391 NOP53Q9NZM5 478 aaKnown RBP8.51□□□□□ -1.05
CPNE3-202ENST00000517391 A6NHS1 94 aa8.5□□□□□ -1.05
CPNE3-202ENST00000517391 IGSF3O75054 1194 aa8.5□□□□□ -1.05
CPNE3-202ENST00000517391 ZC3H6P61129 1189 aaKnown RBP8.5□□□□□ -1.05
CPNE3-202ENST00000517391 LBRQ14739 615 aaKnown RBP8.5□□□□□ -1.05
CPNE3-202ENST00000517391 SAMD5Q5TGI4 173 aa8.5□□□□□ -1.05
CPNE3-202ENST00000517391 C1orf229Q6ZS94 237 aaPredicted RBP8.5□□□□□ -1.05
CPNE3-202ENST00000517391 CFHR5Q9BXR6 569 aa8.5□□□□□ -1.05
CPNE3-202ENST00000517391 ZFYVE28Q9HCC9 887 aa8.5□□□□□ -1.05
CPNE3-202ENST00000517391 KCNMB2Q9Y691 235 aa8.5□□□□□ -1.05
CPNE3-202ENST00000517391 EGFRP00533 1210 aa8.49□□□□□ -1.05
CPNE3-202ENST00000517391 AMPD1P23109 780 aa8.49□□□□□ -1.05
CPNE3-202ENST00000517391 TYRO3Q06418 890 aa8.49□□□□□ -1.05
CPNE3-202ENST00000517391 UBAP2LQ14157 1087 aaKnown RBP8.49□□□□□ -1.05
CPNE3-202ENST00000517391 PMEPA1Q969W9 287 aa8.49□□□□□ -1.05
CPNE3-202ENST00000517391 RNF19AQ9NV58 838 aa8.49□□□□□ -1.05
CPNE3-202ENST00000517391 NLRP2Q9NX02 1062 aa8.49□□□□□ -1.05
CPNE3-202ENST00000517391 USP20Q9Y2K6 914 aa8.49□□□□□ -1.05
CPNE3-202ENST00000517391 PHACTR2O75167 634 aa8.48□□□□□ -1.05
CPNE3-202ENST00000517391 XYLBO75191 536 aa8.48□□□□□ -1.05
CPNE3-202ENST00000517391 ERCC5P28715 1186 aaPredicted RBP8.48□□□□□ -1.05
CPNE3-202ENST00000517391 TRIP4Q15650 581 aaPredicted RBP8.48□□□□□ -1.05
CPNE3-202ENST00000517391 LDLRAD1Q5T700 205 aa8.48□□□□□ -1.05
CPNE3-202ENST00000517391 GOLGA6L1Q8N7Z2 621 aa8.48□□□□□ -1.05
CPNE3-202ENST00000517391 CCDC74AQ96AQ1 378 aa8.48□□□□□ -1.05
CPNE3-202ENST00000517391 USP35Q9P2H5 1018 aa8.48□□□□□ -1.05
CPNE3-202ENST00000517391 FOXD3Q9UJU5 478 aaPredicted RBP8.48□□□□□ -1.05
CPNE3-202ENST00000517391 HOXB4P17483 251 aaPredicted RBP8.47□□□□□ -1.05
CPNE3-202ENST00000517391 EIF4BP23588 611 aaKnown RBP8.47□□□□□ -1.05
CPNE3-202ENST00000517391 KCNQ4P56696 695 aa8.47□□□□□ -1.05
CPNE3-202ENST00000517391 HDLBPQ00341 1268 aaKnown RBP8.47□□□□□ -1.05
CPNE3-202ENST00000517391 FOXD4L6Q3SYB3 417 aaPredicted RBP8.47□□□□□ -1.05
CPNE3-202ENST00000517391 FIGNL1Q6PIW4 674 aa8.47□□□□□ -1.05
CPNE3-202ENST00000517391 FOXD4L3Q6VB84 417 aaPredicted RBP8.47□□□□□ -1.05
CPNE3-202ENST00000517391 NLRP13Q86W25 1043 aa8.47□□□□□ -1.05
CPNE3-202ENST00000517391 RNF34Q969K3 372 aa8.47□□□□□ -1.05
CPNE3-202ENST00000517391 ABHD17AQ96GS6 310 aa8.47□□□□□ -1.05
CPNE3-202ENST00000517391 ZCCHC2Q9C0B9 1178 aaKnown RBP8.47□□□□□ -1.05
CPNE3-202ENST00000517391 BRD7Q9NPI1 651 aa8.47□□□□□ -1.05
CPNE3-202ENST00000517391 BNIP3LO60238 219 aa8.46□□□□□ -1.06
CPNE3-202ENST00000517391 GATA4P43694 442 aa8.46□□□□□ -1.06
CPNE3-202ENST00000517391 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.46□□□□□ -1.06
CPNE3-202ENST00000517391 CRELD1Q96HD1 420 aa8.46□□□□□ -1.06
CPNE3-202ENST00000517391 ABI2Q9NYB9 513 aaPredicted RBP8.46□□□□□ -1.06
CPNE3-202ENST00000517391 PHF24Q9UPV7 400 aa8.46□□□□□ -1.06
CPNE3-202ENST00000517391 SCRIBQ14160 1630 aa8.46□□□□□ -1.06
CPNE3-202ENST00000517391 ZNF76P36508 570 aa8.45□□□□□ -1.06
CPNE3-202ENST00000517391 TTC39BQ5VTQ0 682 aaPredicted RBP8.45□□□□□ -1.06
CPNE3-202ENST00000517391 SRCIN1Q9C0H9 1055 aa8.45□□□□□ -1.06
CPNE3-202ENST00000517391 TMEM63CQ9P1W3 806 aa8.45□□□□□ -1.06
CPNE3-202ENST00000517391 KCNH4Q9UQ05 1017 aa8.45□□□□□ -1.06
CPNE3-202ENST00000517391 PCDHGC4Q9Y5F7 938 aa8.45□□□□□ -1.06
CPNE3-202ENST00000517391 ATXN7O15265 892 aaPredicted RBP8.44□□□□□ -1.06
CPNE3-202ENST00000517391 GRNP28799 593 aaKnown RBP8.44□□□□□ -1.06
CPNE3-202ENST00000517391 C12orf49Q9H741 205 aa8.44□□□□□ -1.06
CPNE3-202ENST00000517391 NDFIP2Q9NV92 336 aa8.44□□□□□ -1.06
CPNE3-202ENST00000517391 ATXN7L1Q9ULK2 861 aaPredicted RBP8.44□□□□□ -1.06
CPNE3-202ENST00000517391 DCDC2BA2VCK2 349 aa8.43□□□□□ -1.06
CPNE3-202ENST00000517391 FAM157BP0CG42 384 aa8.43□□□□□ -1.06
CPNE3-202ENST00000517391 FANCCQ00597 558 aa8.43□□□□□ -1.06
CPNE3-202ENST00000517391 LAMC2Q13753 1193 aa8.43□□□□□ -1.06
CPNE3-202ENST00000517391 USPL1Q5W0Q7 1092 aa8.43□□□□□ -1.06
CPNE3-202ENST00000517391 NT5DC4Q86YG4 428 aa8.43□□□□□ -1.06
CPNE3-202ENST00000517391 GALNT12Q8IXK2 581 aa8.43□□□□□ -1.06
CPNE3-202ENST00000517391 EPS8L3Q8TE67 593 aaKnown RBP8.43□□□□□ -1.06
CPNE3-202ENST00000517391 PPP4R2Q9NY27 417 aa8.43□□□□□ -1.06
CPNE3-202ENST00000517391 KHNYNO15037 678 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms