RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 UBASH3BQ8TF42 649 aa2.09□□□□□ -2.07
RNU6-557P-201ENST00000516842 TTC9Q92623 222 aa2.09□□□□□ -2.07
RNU6-557P-201ENST00000516842 PNMA5Q96PV4 448 aa2.09□□□□□ -2.07
RNU6-557P-201ENST00000516842 MENTQ9BUN1 341 aa2.09□□□□□ -2.07
RNU6-557P-201ENST00000516842 CARD10Q9BWT7 1032 aa2.09□□□□□ -2.07
RNU6-557P-201ENST00000516842 IRF2BPLQ9H1B7 796 aa2.09□□□□□ -2.07
RNU6-557P-201ENST00000516842 ZFATQ9P243 1243 aa2.09□□□□□ -2.07
RNU6-557P-201ENST00000516842 CNTNAP4Q9C0A0 1308 aa2.09□□□□□ -2.08
RNU6-557P-201ENST00000516842 TMEM229AB2RXF0 380 aa2.08□□□□□ -2.08
RNU6-557P-201ENST00000516842 J3QW42 95 aa2.08□□□□□ -2.08
RNU6-557P-201ENST00000516842 TM4SF5O14894 197 aa2.08□□□□□ -2.08
RNU6-557P-201ENST00000516842 NUAK1O60285 661 aa2.08□□□□□ -2.08
RNU6-557P-201ENST00000516842 CD8BP10966 210 aa2.08□□□□□ -2.08
RNU6-557P-201ENST00000516842 EIF2AK2P19525 551 aaKnown RBP2.08□□□□□ -2.08
RNU6-557P-201ENST00000516842 RXRBP28702 533 aa2.08□□□□□ -2.08
RNU6-557P-201ENST00000516842 CD68P34810 354 aaPredicted RBP2.08□□□□□ -2.08
RNU6-557P-201ENST00000516842 NOS2P35228 1153 aa2.08□□□□□ -2.08
RNU6-557P-201ENST00000516842 HNRNPA0Q13151 305 aaKnown RBP2.08□□□□□ -2.08
RNU6-557P-201ENST00000516842 MTFR1Q15390 333 aa2.08□□□□□ -2.08
RNU6-557P-201ENST00000516842 ATG14Q6ZNE5 492 aa2.08□□□□□ -2.08
RNU6-557P-201ENST00000516842 ZSWIM9Q86XI8 627 aa2.08□□□□□ -2.08
RNU6-557P-201ENST00000516842 CD320Q9NPF0 282 aa2.08□□□□□ -2.08
RNU6-557P-201ENST00000516842 ZNF232Q9UNY5 417 aa2.08□□□□□ -2.08
RNU6-557P-201ENST00000516842 TRIM33Q9UPN9 1127 aa2.08□□□□□ -2.08
RNU6-557P-201ENST00000516842 ADAM11O75078 769 aa2.07□□□□□ -2.08
RNU6-557P-201ENST00000516842 USP17L8P0C7I0 530 aa2.07□□□□□ -2.08
RNU6-557P-201ENST00000516842 FUT4P22083 530 aa2.07□□□□□ -2.08
RNU6-557P-201ENST00000516842 RGS19P49795 217 aa2.07□□□□□ -2.08
RNU6-557P-201ENST00000516842 NFKBIBQ15653 356 aa2.07□□□□□ -2.08
RNU6-557P-201ENST00000516842 KCNMB1Q16558 191 aa2.07□□□□□ -2.08
RNU6-557P-201ENST00000516842 DUOXA2Q1HG44 320 aa2.07□□□□□ -2.08
RNU6-557P-201ENST00000516842 OXLD1Q5BKU9 147 aa2.07□□□□□ -2.08
RNU6-557P-201ENST00000516842 FYB2Q5VWT5 728 aa2.07□□□□□ -2.08
RNU6-557P-201ENST00000516842 DHX32Q7L7V1 743 aaKnown RBP2.07□□□□□ -2.08
RNU6-557P-201ENST00000516842 FOXD4L4Q8WXT5 416 aaPredicted RBP2.07□□□□□ -2.08
RNU6-557P-201ENST00000516842 PLD4Q96BZ4 506 aa2.07□□□□□ -2.08
RNU6-557P-201ENST00000516842 BORCS6Q96GS4 357 aa2.07□□□□□ -2.08
RNU6-557P-201ENST00000516842 SUSD3Q96L08 255 aa2.07□□□□□ -2.08
RNU6-557P-201ENST00000516842 SLC4A9Q96Q91 983 aa2.07□□□□□ -2.08
RNU6-557P-201ENST00000516842 PRDM7Q9NQW5 492 aa2.07□□□□□ -2.08
RNU6-557P-201ENST00000516842 CELA3BP08861 270 aa2.06□□□□□ -2.08
RNU6-557P-201ENST00000516842 TARSP26639 723 aaKnown RBP2.06□□□□□ -2.08
RNU6-557P-201ENST00000516842 USP4Q13107 963 aa2.06□□□□□ -2.08
RNU6-557P-201ENST00000516842 CCINQ13939 588 aa2.06□□□□□ -2.08
RNU6-557P-201ENST00000516842 CRTC2Q53ET0 693 aaPredicted RBP2.06□□□□□ -2.08
RNU6-557P-201ENST00000516842 SLC16A11Q8NCK7 471 aa2.06□□□□□ -2.08
RNU6-557P-201ENST00000516842 PROCA1Q8NCQ7 364 aaPredicted RBP2.06□□□□□ -2.08
RNU6-557P-201ENST00000516842 TRPM4Q8TD43 1214 aa2.06□□□□□ -2.08
RNU6-557P-201ENST00000516842 TBC1D32Q96NH3 1257 aa2.06□□□□□ -2.08
RNU6-557P-201ENST00000516842 DIRC2Q96SL1 478 aa2.06□□□□□ -2.08
RNU6-557P-201ENST00000516842 METTL22Q9BUU2 404 aaPredicted RBP2.06□□□□□ -2.08
RNU6-557P-201ENST00000516842 CEP126Q9P2H0 1117 aa2.06□□□□□ -2.08
RNU6-557P-201ENST00000516842 HCN4Q9Y3Q4 1203 aa2.06□□□□□ -2.08
RNU6-557P-201ENST00000516842 GAS2O43903 313 aaKnown RBP2.05□□□□□ -2.08
RNU6-557P-201ENST00000516842 FSHBP01225 129 aa2.05□□□□□ -2.08
RNU6-557P-201ENST00000516842 ZXDAP98168 799 aa2.05□□□□□ -2.08
RNU6-557P-201ENST00000516842 CPSF6Q16630 551 aaKnown RBP eCLIP2.05□□□□□ -2.08
RNU6-557P-201ENST00000516842 ADAMTSL4Q6UY14 1074 aa2.05□□□□□ -2.08
RNU6-557P-201ENST00000516842 ZNF765Q7L2R6 523 aa2.05□□□□□ -2.08
RNU6-557P-201ENST00000516842 BTLAQ7Z6A9 289 aa2.05□□□□□ -2.08
RNU6-557P-201ENST00000516842 MAP4K3Q8IVH8 894 aa2.05□□□□□ -2.08
RNU6-557P-201ENST00000516842 CXorf38Q8TB03 319 aa2.05□□□□□ -2.08
RNU6-557P-201ENST00000516842 PI4K2BQ8TCG2 481 aa2.05□□□□□ -2.08
RNU6-557P-201ENST00000516842 GATA6Q92908 595 aa2.05□□□□□ -2.08
RNU6-557P-201ENST00000516842 KCNC2Q96PR1 638 aa2.05□□□□□ -2.08
RNU6-557P-201ENST00000516842 SRA1Q9HD15 236 aaKnown RBP2.05□□□□□ -2.08
RNU6-557P-201ENST00000516842 DOLKQ9UPQ8 538 aa2.05□□□□□ -2.08
RNU6-557P-201ENST00000516842 SMG5Q9UPR3 1016 aaKnown RBP2.05□□□□□ -2.08
RNU6-557P-201ENST00000516842 FAM95CA0A1B0GW59 222 aa2.04□□□□□ -2.08
RNU6-557P-201ENST00000516842 TMEM253P0C7T8 217 aa2.04□□□□□ -2.08
RNU6-557P-201ENST00000516842 LINC00310P59036 64 aa2.04□□□□□ -2.08
RNU6-557P-201ENST00000516842 KRTAP10-9P60411 292 aa2.04□□□□□ -2.08
RNU6-557P-201ENST00000516842 GPLD1P80108 840 aa2.04□□□□□ -2.08
RNU6-557P-201ENST00000516842 TEAD4Q15561 434 aa2.04□□□□□ -2.08
RNU6-557P-201ENST00000516842 PCSK7Q16549 785 aa2.04□□□□□ -2.08
RNU6-557P-201ENST00000516842 CRB2Q5IJ48 1285 aa2.04□□□□□ -2.08
RNU6-557P-201ENST00000516842 MPZL3Q6UWV2 235 aa2.04□□□□□ -2.08
RNU6-557P-201ENST00000516842 ZAR1Q86SH2 424 aa2.04□□□□□ -2.08
RNU6-557P-201ENST00000516842 FBLIM1Q8WUP2 373 aa2.04□□□□□ -2.08
RNU6-557P-201ENST00000516842 IFT43Q96FT9 208 aa2.04□□□□□ -2.08
RNU6-557P-201ENST00000516842 NAF1Q96HR8 494 aaKnown RBP2.04□□□□□ -2.08
RNU6-557P-201ENST00000516842 SCAND2PQ9GZW5 306 aaPredicted RBP2.04□□□□□ -2.08
RNU6-557P-201ENST00000516842 RTEL1Q9NZ71 1219 aa2.04□□□□□ -2.08
RNU6-557P-201ENST00000516842 SCHIP1Q9P0W5 487 aaPredicted RBP2.04□□□□□ -2.08
RNU6-557P-201ENST00000516842 HIF3AQ9Y2N7 669 aa2.04□□□□□ -2.08
RNU6-557P-201ENST00000516842 PPME1Q9Y570 386 aa2.04□□□□□ -2.08
RNU6-557P-201ENST00000516842 ETV2O00321 342 aaPredicted RBP2.03□□□□□ -2.08
RNU6-557P-201ENST00000516842 TRIM13O60858 407 aa2.03□□□□□ -2.08
RNU6-557P-201ENST00000516842 SASH3O75995 380 aa2.03□□□□□ -2.08
RNU6-557P-201ENST00000516842 MAP3K6O95382 1288 aa2.03□□□□□ -2.08
RNU6-557P-201ENST00000516842 HMGA2P52926 109 aa2.03□□□□□ -2.08
RNU6-557P-201ENST00000516842 NR1H3Q13133 447 aa2.03□□□□□ -2.08
RNU6-557P-201ENST00000516842 CDPF1Q6NVV7 123 aa2.03□□□□□ -2.08
RNU6-557P-201ENST00000516842 FLAD1Q8NFF5 587 aa2.03□□□□□ -2.08
RNU6-557P-201ENST00000516842 KLHDC7BQ96G42 594 aa2.03□□□□□ -2.08
RNU6-557P-201ENST00000516842 SORCS2Q96PQ0 1159 aa2.03□□□□□ -2.08
RNU6-557P-201ENST00000516842 NSUN3Q9H649 340 aaKnown RBP2.03□□□□□ -2.08
RNU6-557P-201ENST00000516842 PRKAG2Q9UGJ0 569 aa2.03□□□□□ -2.08
RNU6-557P-201ENST00000516842 SERTM1A2A2V5 107 aa2.02□□□□□ -2.09
RNU6-557P-201ENST00000516842 TCAF2A6NFQ2 919 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms