RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 TMOD4Q9NZQ9 345 aa12.57□□□□□ -0.4
TRIM41-209ENST00000515834 EYA3Q99504 573 aa12.57□□□□□ -0.4
TRIM41-209ENST00000515834 CAMSAP2Q08AD1 1489 aa12.57□□□□□ -0.4
TRIM41-209ENST00000515834 TICAM2Q86XR7 235 aa12.57□□□□□ -0.4
TRIM41-209ENST00000515834 CCDC50Q8IVM0 306 aa12.57□□□□□ -0.4
TRIM41-209ENST00000515834 PIK3R4Q99570 1358 aa12.57□□□□□ -0.4
TRIM41-209ENST00000515834 NPHP3Q7Z494 1330 aa12.57□□□□□ -0.4
TRIM41-209ENST00000515834 CCDC175P0C221 793 aa12.56□□□□□ -0.4
TRIM41-209ENST00000515834 GIMAP7Q8NHV1 300 aa12.56□□□□□ -0.4
TRIM41-209ENST00000515834 RBM17Q96I25 401 aaKnown RBP12.56□□□□□ -0.4
TRIM41-209ENST00000515834 SUPT6HQ7KZ85 1726 aaKnown RBP12.56□□□□□ -0.4
TRIM41-209ENST00000515834 MCM3P25205 808 aa12.56□□□□□ -0.4
TRIM41-209ENST00000515834 TRAPPC3LQ5T215 181 aa12.56□□□□□ -0.4
TRIM41-209ENST00000515834 RRP36Q96EU6 259 aaKnown RBP12.56□□□□□ -0.4
TRIM41-209ENST00000515834 CDK13Q14004 1512 aaKnown RBP12.56□□□□□ -0.4
TRIM41-209ENST00000515834 CTAGE5O15320 804 aa12.56□□□□□ -0.4
TRIM41-209ENST00000515834 PYM1Q9BRP8 204 aaKnown RBP12.56□□□□□ -0.4
TRIM41-209ENST00000515834 ZYXQ15942 572 aaKnown RBP12.56□□□□□ -0.4
TRIM41-209ENST00000515834 SLC9C2Q5TAH2 1124 aa12.56□□□□□ -0.4
TRIM41-209ENST00000515834 ALG1Q9BT22 464 aa12.56□□□□□ -0.4
TRIM41-209ENST00000515834 ADGRF5Q8IZF2 1346 aa12.56□□□□□ -0.4
TRIM41-209ENST00000515834 N4BP3O15049 544 aa12.56□□□□□ -0.4
TRIM41-209ENST00000515834 ASIC1P78348 528 aa12.55□□□□□ -0.4
TRIM41-209ENST00000515834 CCDC102BQ68D86 513 aa12.55□□□□□ -0.4
TRIM41-209ENST00000515834 MAGEB6Q8N7X4 407 aa12.55□□□□□ -0.4
TRIM41-209ENST00000515834 KIF18AQ8NI77 898 aa12.55□□□□□ -0.4
TRIM41-209ENST00000515834 IQCGQ9H095 443 aaKnown RBP12.55□□□□□ -0.4
TRIM41-209ENST00000515834 RARSP54136 660 aaKnown RBP12.55□□□□□ -0.4
TRIM41-209ENST00000515834 IL2RBP14784 551 aa12.55□□□□□ -0.4
TRIM41-209ENST00000515834 PLCB3Q01970 1234 aa12.55□□□□□ -0.4
TRIM41-209ENST00000515834 KANK3Q6NY19 840 aa12.55□□□□□ -0.4
TRIM41-209ENST00000515834 C11orf95C9JLR9 678 aaPredicted RBP12.55□□□□□ -0.4
TRIM41-209ENST00000515834 LDHBP07195 334 aaKnown RBP12.55□□□□□ -0.4
TRIM41-209ENST00000515834 AKR1B10O60218 316 aa12.54□□□□□ -0.4
TRIM41-209ENST00000515834 MCM4P33991 863 aa12.54□□□□□ -0.4
TRIM41-209ENST00000515834 RBM25P49756 843 aaKnown RBP12.54□□□□□ -0.4
TRIM41-209ENST00000515834 IFI16Q16666 785 aaKnown RBP12.54□□□□□ -0.4
TRIM41-209ENST00000515834 LMBR1LQ6UX01 489 aa12.54□□□□□ -0.4
TRIM41-209ENST00000515834 LRRC59Q96AG4 307 aaKnown RBP12.54□□□□□ -0.4
TRIM41-209ENST00000515834 RMND1Q9NWS8 449 aa12.54□□□□□ -0.4
TRIM41-209ENST00000515834 ODF2LQ9ULJ1 636 aa12.54□□□□□ -0.4
TRIM41-209ENST00000515834 WDR7Q9Y4E6 1490 aa12.54□□□□□ -0.4
TRIM41-209ENST00000515834 PSMC4P43686 418 aa12.54□□□□□ -0.4
TRIM41-209ENST00000515834 RNF34Q969K3 372 aa12.54□□□□□ -0.4
TRIM41-209ENST00000515834 POLR3GO15318 223 aaPredicted RBP12.54□□□□□ -0.4
TRIM41-209ENST00000515834 GPR162Q16538 588 aa12.54□□□□□ -0.4
TRIM41-209ENST00000515834 STX1AQ16623 288 aa12.54□□□□□ -0.4
TRIM41-209ENST00000515834 ZSWIM4Q9H7M6 989 aa12.54□□□□□ -0.4
TRIM41-209ENST00000515834 TTC12Q9H892 705 aaPredicted RBP12.54□□□□□ -0.4
TRIM41-209ENST00000515834 CIZ1Q9ULV3 898 aaPredicted RBP12.54□□□□□ -0.4
TRIM41-209ENST00000515834 KIF4AO95239 1232 aa12.54□□□□□ -0.4
TRIM41-209ENST00000515834 ZNF710Q8N1W2 664 aa12.54□□□□□ -0.4
TRIM41-209ENST00000515834 MXRA7P84157 204 aa12.54□□□□□ -0.4
TRIM41-209ENST00000515834 NECAB1Q8N987 351 aa12.54□□□□□ -0.4
TRIM41-209ENST00000515834 IVNS1ABPQ9Y6Y0 642 aa12.54□□□□□ -0.4
TRIM41-209ENST00000515834 NCKAP5LQ9HCH0 1330 aa12.54□□□□□ -0.4
TRIM41-209ENST00000515834 EIF6P56537 245 aaKnown RBP12.54□□□□□ -0.4
TRIM41-209ENST00000515834 HAUS7Q99871 368 aa12.54□□□□□ -0.4
TRIM41-209ENST00000515834 BACH2Q9BYV9 841 aa12.54□□□□□ -0.4
TRIM41-209ENST00000515834 SLU7O95391 586 aaKnown RBP12.53□□□□□ -0.4
TRIM41-209ENST00000515834 CNNM2Q9H8M5 875 aa12.53□□□□□ -0.4
TRIM41-209ENST00000515834 MBIPQ9NS73 344 aa12.53□□□□□ -0.4
TRIM41-209ENST00000515834 PTGS1P23219 599 aa12.53□□□□□ -0.4
TRIM41-209ENST00000515834 FAM107BQ9H098 131 aa12.53□□□□□ -0.4
TRIM41-209ENST00000515834 LPXNO60711 386 aa12.53□□□□□ -0.4
TRIM41-209ENST00000515834 GNAQP50148 359 aa12.53□□□□□ -0.4
TRIM41-209ENST00000515834 SNX16P57768 344 aa12.53□□□□□ -0.4
TRIM41-209ENST00000515834 PLIN2Q99541 437 aa12.53□□□□□ -0.4
TRIM41-209ENST00000515834 PLVAPQ9BX97 442 aa12.53□□□□□ -0.4
TRIM41-209ENST00000515834 IRS4O14654 1257 aaPredicted RBP12.53□□□□□ -0.4
TRIM41-209ENST00000515834 SYKP43405 635 aa12.53□□□□□ -0.4
TRIM41-209ENST00000515834 CTR9Q6PD62 1173 aa12.53□□□□□ -0.4
TRIM41-209ENST00000515834 BRF1Q92994 677 aa12.53□□□□□ -0.4
TRIM41-209ENST00000515834 TCEANC2Q96MN5 208 aa12.53□□□□□ -0.4
TRIM41-209ENST00000515834 RNF216Q9NWF9 866 aaPredicted RBP12.52□□□□□ -0.4
TRIM41-209ENST00000515834 CCDC184Q52MB2 194 aa12.52□□□□□ -0.4
TRIM41-209ENST00000515834 NFATC2IPQ8NCF5 419 aa12.52□□□□□ -0.4
TRIM41-209ENST00000515834 CC2D2AQ9P2K1 1620 aa12.52□□□□□ -0.4
TRIM41-209ENST00000515834 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.52□□□□□ -0.4
TRIM41-209ENST00000515834 CEP83Q9Y592 693 aa12.52□□□□□ -0.4
TRIM41-209ENST00000515834 SSFA2P28290 1259 aa12.52□□□□□ -0.41
TRIM41-209ENST00000515834 TNRQ92752 1358 aa12.52□□□□□ -0.41
TRIM41-209ENST00000515834 PLCG2P16885 1265 aa12.52□□□□□ -0.41
TRIM41-209ENST00000515834 MARCKSP29966 332 aaPredicted RBP12.52□□□□□ -0.41
TRIM41-209ENST00000515834 MAPK8IP2Q13387 824 aaPredicted RBP12.52□□□□□ -0.41
TRIM41-209ENST00000515834 BRDTQ58F21 947 aaPredicted RBP12.52□□□□□ -0.41
TRIM41-209ENST00000515834 SKAP1Q86WV1 359 aa12.52□□□□□ -0.41
TRIM41-209ENST00000515834 GPCPD1Q9NPB8 672 aa12.52□□□□□ -0.41
TRIM41-209ENST00000515834 BTG4Q9NY30 223 aa12.52□□□□□ -0.41
TRIM41-209ENST00000515834 NOS1P29475 1434 aa12.52□□□□□ -0.41
TRIM41-209ENST00000515834 UFL1O94874 794 aa12.52□□□□□ -0.41
TRIM41-209ENST00000515834 RASA3Q14644 834 aa12.52□□□□□ -0.41
TRIM41-209ENST00000515834 CHST3Q7LGC8 479 aa12.52□□□□□ -0.41
TRIM41-209ENST00000515834 BBXQ8WY36 941 aaPredicted RBP12.52□□□□□ -0.41
TRIM41-209ENST00000515834 KIF2AO00139 706 aaPredicted RBP12.51□□□□□ -0.41
TRIM41-209ENST00000515834 CHMP2AO43633 222 aa12.51□□□□□ -0.41
TRIM41-209ENST00000515834 MCM7P33993 719 aa12.51□□□□□ -0.41
TRIM41-209ENST00000515834 TMTC2Q8N394 836 aa12.51□□□□□ -0.41
TRIM41-209ENST00000515834 PDCL2Q8N4E4 241 aa12.51□□□□□ -0.41
TRIM41-209ENST00000515834 CCDC141Q6ZP82 1450 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms