RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 NLRP3Q96P20 1036 aa18.05■□□□□ 0.48
SMAD1-216ENST00000515527 TAF1P21675 1872 aa18.04■□□□□ 0.48
SMAD1-216ENST00000515527 EVI5O60447 810 aa18.04■□□□□ 0.48
SMAD1-216ENST00000515527 PRKG1Q13976 671 aa18.04■□□□□ 0.48
SMAD1-216ENST00000515527 ARMC9Q7Z3E5 817 aa18.04■□□□□ 0.48
SMAD1-216ENST00000515527 KCNQ5Q9NR82 932 aa18.04■□□□□ 0.48
SMAD1-216ENST00000515527 NUP98P52948 1817 aa18.03■□□□□ 0.48
SMAD1-216ENST00000515527 RIMBP2O15034 1052 aa18.03■□□□□ 0.48
SMAD1-216ENST00000515527 BBOX1O75936 387 aa18.03■□□□□ 0.48
SMAD1-216ENST00000515527 WASHC4Q2M389 1173 aa18.03■□□□□ 0.48
SMAD1-216ENST00000515527 OTUD7BQ6GQQ9 843 aa18.03■□□□□ 0.48
SMAD1-216ENST00000515527 RTL9Q8NET4 1388 aa18.03■□□□□ 0.48
SMAD1-216ENST00000515527 EYSQ5T1H1 3165 aa18.02■□□□□ 0.48
SMAD1-216ENST00000515527 ECE2O60344 883 aa18.02■□□□□ 0.48
SMAD1-216ENST00000515527 GPTP24298 496 aa18.02■□□□□ 0.48
SMAD1-216ENST00000515527 NKX2-3Q8TAU0 364 aa18.02■□□□□ 0.48
SMAD1-216ENST00000515527 KCNQ3O43525 872 aa18.01■□□□□ 0.47
SMAD1-216ENST00000515527 SUSD4Q5VX71 490 aa18.01■□□□□ 0.47
SMAD1-216ENST00000515527 SIPA1L3O60292 1781 aaPredicted RBP18.01■□□□□ 0.47
SMAD1-216ENST00000515527 IBTKQ9P2D0 1353 aaPredicted RBP18.01■□□□□ 0.47
SMAD1-216ENST00000515527 NBPF26B4DH59 902 aa18■□□□□ 0.47
SMAD1-216ENST00000515527 HMOX1P09601 288 aa18■□□□□ 0.47
SMAD1-216ENST00000515527 IL13P35225 146 aa18■□□□□ 0.47
SMAD1-216ENST00000515527 BCAMP50895 628 aa18■□□□□ 0.47
SMAD1-216ENST00000515527 DOK7Q18PE1 504 aa18■□□□□ 0.47
SMAD1-216ENST00000515527 LRIT3Q3SXY7 679 aa18■□□□□ 0.47
SMAD1-216ENST00000515527 NBPF10Q6P3W6 841 aaKnown RBP18■□□□□ 0.47
SMAD1-216ENST00000515527 UBE2Q1Q7Z7E8 422 aa18■□□□□ 0.47
SMAD1-216ENST00000515527 SYMPKQ92797 1274 aaKnown RBP18■□□□□ 0.47
SMAD1-216ENST00000515527 DDX60Q8IY21 1712 aaKnown RBP18■□□□□ 0.47
SMAD1-216ENST00000515527 DUOX1Q9NRD9 1551 aa18■□□□□ 0.47
SMAD1-216ENST00000515527 PRUNE2Q8WUY3 3088 aa18■□□□□ 0.47
SMAD1-216ENST00000515527 TMEM265A0A087WTH1 108 aa17.99■□□□□ 0.47
SMAD1-216ENST00000515527 MTFR1Q15390 333 aa17.99■□□□□ 0.47
SMAD1-216ENST00000515527 SLC10A4Q96EP9 437 aa17.99■□□□□ 0.47
SMAD1-216ENST00000515527 ZNF646O15015 1829 aaPredicted RBP17.99■□□□□ 0.47
SMAD1-216ENST00000515527 UBN2Q6ZU65 1347 aa17.98■□□□□ 0.47
SMAD1-216ENST00000515527 VIL1P09327 827 aaKnown RBP17.98■□□□□ 0.47
SMAD1-216ENST00000515527 ZNF280AP59817 542 aaPredicted RBP17.98■□□□□ 0.47
SMAD1-216ENST00000515527 BTBD11A6QL63 1104 aa17.97■□□□□ 0.47
SMAD1-216ENST00000515527 BMP8BP34820 402 aa17.97■□□□□ 0.47
SMAD1-216ENST00000515527 NGEFQ8N5V2 710 aa17.97■□□□□ 0.47
SMAD1-216ENST00000515527 IL17REQ8NFR9 667 aa17.97■□□□□ 0.47
SMAD1-216ENST00000515527 MYOZ2Q9NPC6 264 aa17.97■□□□□ 0.47
SMAD1-216ENST00000515527 ANGEL1Q9UNK9 670 aaKnown RBP17.97■□□□□ 0.47
SMAD1-216ENST00000515527 C6orf229H3BNL8 230 aa17.96■□□□□ 0.47
SMAD1-216ENST00000515527 FARP2O94887 1054 aaPredicted RBP17.96■□□□□ 0.47
SMAD1-216ENST00000515527 NTSR2O95665 410 aa17.96■□□□□ 0.47
SMAD1-216ENST00000515527 SNRPA1P09661 255 aaKnown RBP17.96■□□□□ 0.47
SMAD1-216ENST00000515527 ZBTB48P10074 688 aaPredicted RBP17.96■□□□□ 0.47
SMAD1-216ENST00000515527 LDLRAD1Q5T700 205 aa17.96■□□□□ 0.47
SMAD1-216ENST00000515527 GDF15Q99988 308 aa17.96■□□□□ 0.47
SMAD1-216ENST00000515527 SCN9AQ15858 1988 aa17.96■□□□□ 0.47
SMAD1-216ENST00000515527 IRS2Q9Y4H2 1338 aa17.96■□□□□ 0.46
SMAD1-216ENST00000515527 GJA8P48165 433 aa17.95■□□□□ 0.46
SMAD1-216ENST00000515527 WNK4Q96J92 1243 aa17.95■□□□□ 0.46
SMAD1-216ENST00000515527 MUC3AQ02505 3323 aa17.95■□□□□ 0.46
SMAD1-216ENST00000515527 ERVV-1B6SEH8 477 aa17.94■□□□□ 0.46
SMAD1-216ENST00000515527 TNFRSF10AO00220 468 aa17.94■□□□□ 0.46
SMAD1-216ENST00000515527 DDX46Q7L014 1031 aaKnown RBP17.94■□□□□ 0.46
SMAD1-216ENST00000515527 PPP1R42Q7Z4L9 355 aa17.94■□□□□ 0.46
SMAD1-216ENST00000515527 GUCD1Q96NT3 240 aa17.94■□□□□ 0.46
SMAD1-216ENST00000515527 NSFL1CQ9UNZ2 370 aaKnown RBP17.94■□□□□ 0.46
SMAD1-216ENST00000515527 LAMB1P07942 1786 aa17.94■□□□□ 0.46
SMAD1-216ENST00000515527 G3V3G9 751 aa17.93■□□□□ 0.46
SMAD1-216ENST00000515527 ECM2O94769 699 aaPredicted RBP17.93■□□□□ 0.46
SMAD1-216ENST00000515527 GRAPQ13588 217 aa17.93■□□□□ 0.46
SMAD1-216ENST00000515527 DCAF8Q5TAQ9 597 aa17.93■□□□□ 0.46
SMAD1-216ENST00000515527 AGBL3Q8NEM8 1001 aa17.93■□□□□ 0.46
SMAD1-216ENST00000515527 GRAPLQ8TC17 118 aaPredicted RBP17.93■□□□□ 0.46
SMAD1-216ENST00000515527 NECTIN2Q92692 538 aa17.93■□□□□ 0.46
SMAD1-216ENST00000515527 MAP3K15Q6ZN16 1313 aa17.93■□□□□ 0.46
SMAD1-216ENST00000515527 GNAT3A8MTJ3 354 aa17.92■□□□□ 0.46
SMAD1-216ENST00000515527 GJB1P08034 283 aa17.92■□□□□ 0.46
SMAD1-216ENST00000515527 USP17L8P0C7I0 530 aa17.92■□□□□ 0.46
SMAD1-216ENST00000515527 KIF6Q6ZMV9 814 aa17.92■□□□□ 0.46
SMAD1-216ENST00000515527 TDHQ8IZJ6 230 aa17.92■□□□□ 0.46
SMAD1-216ENST00000515527 FAM161BQ96MY7 647 aa17.92■□□□□ 0.46
SMAD1-216ENST00000515527 EYA3Q99504 573 aa17.92■□□□□ 0.46
SMAD1-216ENST00000515527 FZD1Q9UP38 647 aa17.92■□□□□ 0.46
SMAD1-216ENST00000515527 LAMB2P55268 1798 aa17.91■□□□□ 0.46
SMAD1-216ENST00000515527 NBPF9Q3BBW0 867 aa17.91■□□□□ 0.46
SMAD1-216ENST00000515527 RSBN1LQ6PCB5 846 aaPredicted RBP17.91■□□□□ 0.46
SMAD1-216ENST00000515527 SNX27Q96L92 541 aa17.91■□□□□ 0.46
SMAD1-216ENST00000515527 ANKRD36CQ5JPF3 1778 aa17.9■□□□□ 0.46
SMAD1-216ENST00000515527 MAP3K12Q12852 859 aa17.9■□□□□ 0.46
SMAD1-216ENST00000515527 KIF22Q14807 665 aa17.9■□□□□ 0.46
SMAD1-216ENST00000515527 TMC4Q7Z404 712 aa17.9■□□□□ 0.46
SMAD1-216ENST00000515527 CLMNQ96JQ2 1002 aa17.9■□□□□ 0.46
SMAD1-216ENST00000515527 PTPN18Q99952 460 aa17.9■□□□□ 0.46
SMAD1-216ENST00000515527 RNF208Q9H0X6 261 aa17.9■□□□□ 0.46
SMAD1-216ENST00000515527 ZBTB3Q9H5J0 574 aa17.9■□□□□ 0.46
SMAD1-216ENST00000515527 POLLQ9UGP5 575 aa17.9■□□□□ 0.46
SMAD1-216ENST00000515527 LAMA2P24043 3122 aaKnown RBP17.9■□□□□ 0.46
SMAD1-216ENST00000515527 ZSWIM8A7E2V4 1837 aa17.9■□□□□ 0.46
SMAD1-216ENST00000515527 LRRC37AA6NMS7 1700 aa17.89■□□□□ 0.46
SMAD1-216ENST00000515527 CCL5P13501 91 aa17.89■□□□□ 0.45
SMAD1-216ENST00000515527 MAFAQ8NHW3 353 aaPredicted RBP17.89■□□□□ 0.45
SMAD1-216ENST00000515527 TAF1CQ15572 869 aaPredicted RBP17.88■□□□□ 0.45
SMAD1-216ENST00000515527 SLC10A5Q5PT55 438 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms