RNA–Protein interactions for RNA: ENST00000515425.5

SH3TC2-215, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3TC2, Length 4,059 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-215ENST00000515425 SKILP12757 684 aa11.9□□□□□ -0.5
SH3TC2-215ENST00000515425 CLSTN2Q9H4D0 955 aa11.9□□□□□ -0.5
SH3TC2-215ENST00000515425 AXIN2Q9Y2T1 843 aa11.9□□□□□ -0.5
SH3TC2-215ENST00000515425 SERPINC1P01008 464 aa11.9□□□□□ -0.51
SH3TC2-215ENST00000515425 CCDC57Q2TAC2 916 aa11.9□□□□□ -0.51
SH3TC2-215ENST00000515425 FAM177A1Q8N128 213 aaPredicted RBP11.9□□□□□ -0.51
SH3TC2-215ENST00000515425 SEC62Q99442 399 aaKnown RBP11.9□□□□□ -0.51
SH3TC2-215ENST00000515425 KIF20BQ96Q89 1820 aa11.9□□□□□ -0.51
SH3TC2-215ENST00000515425 SALL3Q9BXA9 1300 aa11.9□□□□□ -0.51
SH3TC2-215ENST00000515425 CDC42BPGQ6DT37 1551 aa11.89□□□□□ -0.51
SH3TC2-215ENST00000515425 ZNF75DP51815 510 aa11.89□□□□□ -0.51
SH3TC2-215ENST00000515425 NECTIN1Q15223 517 aa11.89□□□□□ -0.51
SH3TC2-215ENST00000515425 ZBTB3Q9H5J0 574 aa11.89□□□□□ -0.51
SH3TC2-215ENST00000515425 RPAP1Q9BWH6 1393 aaPredicted RBP11.89□□□□□ -0.51
SH3TC2-215ENST00000515425 PTPDC1A2A3K4 754 aa11.89□□□□□ -0.51
SH3TC2-215ENST00000515425 OLFM4Q6UX06 510 aa11.89□□□□□ -0.51
SH3TC2-215ENST00000515425 CAVIN2O95810 425 aa11.89□□□□□ -0.51
SH3TC2-215ENST00000515425 SNRPA1P09661 255 aaKnown RBP11.89□□□□□ -0.51
SH3TC2-215ENST00000515425 IMMTQ16891 758 aaKnown RBP11.89□□□□□ -0.51
SH3TC2-215ENST00000515425 ZNF589Q86UQ0 364 aaPredicted RBP11.89□□□□□ -0.51
SH3TC2-215ENST00000515425 AOPEPQ8N6M6 819 aa11.89□□□□□ -0.51
SH3TC2-215ENST00000515425 NCOA5Q9HCD5 579 aaKnown RBP11.89□□□□□ -0.51
SH3TC2-215ENST00000515425 NRBP1Q9UHY1 535 aa11.89□□□□□ -0.51
SH3TC2-215ENST00000515425 CTNNA3Q9UI47 895 aa11.89□□□□□ -0.51
SH3TC2-215ENST00000515425 TNNI3KQ59H18 835 aa11.88□□□□□ -0.51
SH3TC2-215ENST00000515425 KIF18AQ8NI77 898 aa11.88□□□□□ -0.51
SH3TC2-215ENST00000515425 ERCC4Q92889 916 aaPredicted RBP11.88□□□□□ -0.51
SH3TC2-215ENST00000515425 MRVI1Q9Y6F6 885 aa11.88□□□□□ -0.51
SH3TC2-215ENST00000515425 FPGT-TNNI3KV9GXZ4 949 aa11.88□□□□□ -0.51
SH3TC2-215ENST00000515425 OVOS2A0A0J9YW53 1432 aa11.88□□□□□ -0.51
SH3TC2-215ENST00000515425 OVOS2Q6IE36 1432 aa11.88□□□□□ -0.51
SH3TC2-215ENST00000515425 SASH1O94885 1247 aa11.88□□□□□ -0.51
SH3TC2-215ENST00000515425 SFPQP23246 707 aaKnown RBP eCLIP11.88□□□□□ -0.51
SH3TC2-215ENST00000515425 TIMM10P62072 90 aa11.88□□□□□ -0.51
SH3TC2-215ENST00000515425 KIAA1524Q8TCG1 905 aa11.88□□□□□ -0.51
SH3TC2-215ENST00000515425 U2AF2P26368 475 aaKnown RBP eCLIP11.88□□□□□ -0.51
SH3TC2-215ENST00000515425 ZNF790Q6PG37 636 aa11.88□□□□□ -0.51
SH3TC2-215ENST00000515425 DHX32Q7L7V1 743 aaKnown RBP11.88□□□□□ -0.51
SH3TC2-215ENST00000515425 USP31Q70CQ4 1352 aa11.88□□□□□ -0.51
SH3TC2-215ENST00000515425 GOLGA8BA8MQT2 603 aa11.87□□□□□ -0.51
SH3TC2-215ENST00000515425 GCKRQ14397 625 aa11.87□□□□□ -0.51
SH3TC2-215ENST00000515425 TMC6Q7Z403 805 aa11.87□□□□□ -0.51
SH3TC2-215ENST00000515425 ORC3Q9UBD5 711 aaPredicted RBP11.87□□□□□ -0.51
SH3TC2-215ENST00000515425 PAXBP1Q9Y5B6 917 aa11.87□□□□□ -0.51
SH3TC2-215ENST00000515425 SPATA31D1Q6ZQQ2 1576 aa11.87□□□□□ -0.51
SH3TC2-215ENST00000515425 IFNL2Q8IZJ0 200 aa11.87□□□□□ -0.51
SH3TC2-215ENST00000515425 USP16Q9Y5T5 823 aa11.87□□□□□ -0.51
SH3TC2-215ENST00000515425 KDRP35968 1356 aa11.87□□□□□ -0.51
SH3TC2-215ENST00000515425 NEMFO60524 1076 aa11.87□□□□□ -0.51
SH3TC2-215ENST00000515425 CCDC69A6NI79 296 aa11.86□□□□□ -0.51
SH3TC2-215ENST00000515425 SLC3A2P08195 630 aaKnown RBP11.86□□□□□ -0.51
SH3TC2-215ENST00000515425 SMAP1Q8IYB5 467 aaPredicted RBP11.86□□□□□ -0.51
SH3TC2-215ENST00000515425 GTF3C6Q969F1 213 aa11.86□□□□□ -0.51
SH3TC2-215ENST00000515425 CCDC34Q96HJ3 373 aa11.86□□□□□ -0.51
SH3TC2-215ENST00000515425 PAG1Q9NWQ8 432 aa11.86□□□□□ -0.51
SH3TC2-215ENST00000515425 TAF5LO75529 589 aa11.86□□□□□ -0.51
SH3TC2-215ENST00000515425 SAFBQ15424 915 aaKnown RBP eCLIP11.86□□□□□ -0.51
SH3TC2-215ENST00000515425 RRP12Q5JTH9 1297 aaKnown RBP11.86□□□□□ -0.51
SH3TC2-215ENST00000515425 A0A1B0GVL5 298 aa11.86□□□□□ -0.51
SH3TC2-215ENST00000515425 NEURL1BA8MQ27 555 aa11.86□□□□□ -0.51
SH3TC2-215ENST00000515425 SMTNL1A8MU46 457 aa11.86□□□□□ -0.51
SH3TC2-215ENST00000515425 CFAP100Q494V2 611 aa11.86□□□□□ -0.51
SH3TC2-215ENST00000515425 OTUD7BQ6GQQ9 843 aa11.86□□□□□ -0.51
SH3TC2-215ENST00000515425 MRPS27Q92552 414 aaKnown RBP11.86□□□□□ -0.51
SH3TC2-215ENST00000515425 METTL22Q9BUU2 404 aaPredicted RBP11.86□□□□□ -0.51
SH3TC2-215ENST00000515425 CGNQ9P2M7 1197 aaKnown RBP11.86□□□□□ -0.51
SH3TC2-215ENST00000515425 RIMS1Q86UR5 1692 aaKnown RBP11.86□□□□□ -0.51
SH3TC2-215ENST00000515425 ZSCAN25Q6NSZ9 544 aa11.86□□□□□ -0.51
SH3TC2-215ENST00000515425 JMYQ8N9B5 988 aa11.86□□□□□ -0.51
SH3TC2-215ENST00000515425 A0A087WWV3 80 aa11.85□□□□□ -0.51
SH3TC2-215ENST00000515425 KLF18A0A0U1RQI7 1052 aa11.85□□□□□ -0.51
SH3TC2-215ENST00000515425 UBAP1LF5GYI3 381 aa11.85□□□□□ -0.51
SH3TC2-215ENST00000515425 IDH1O75874 414 aaKnown RBP11.85□□□□□ -0.51
SH3TC2-215ENST00000515425 AKAP17AQ02040 695 aaKnown RBP11.85□□□□□ -0.51
SH3TC2-215ENST00000515425 CNNM1Q9NRU3 951 aa11.85□□□□□ -0.51
SH3TC2-215ENST00000515425 HSP90AB3PQ58FF7 597 aa11.85□□□□□ -0.51
SH3TC2-215ENST00000515425 ZNF496Q96IT1 587 aaPredicted RBP11.85□□□□□ -0.51
SH3TC2-215ENST00000515425 ARGLU1Q9NWB6 273 aaPredicted RBP11.85□□□□□ -0.51
SH3TC2-215ENST00000515425 HOOK1Q9UJC3 728 aaKnown RBP11.85□□□□□ -0.51
SH3TC2-215ENST00000515425 CWC25Q9NXE8 425 aaPredicted RBP11.85□□□□□ -0.51
SH3TC2-215ENST00000515425 ATP5JP18859 108 aa11.84□□□□□ -0.51
SH3TC2-215ENST00000515425 DBNLQ9UJU6 430 aaKnown RBP11.84□□□□□ -0.51
SH3TC2-215ENST00000515425 ZNF213O14771 459 aa11.84□□□□□ -0.51
SH3TC2-215ENST00000515425 SNW1Q13573 536 aaKnown RBP11.84□□□□□ -0.51
SH3TC2-215ENST00000515425 CCDC144CPQ8IYA2 1237 aa11.84□□□□□ -0.51
SH3TC2-215ENST00000515425 MARCKSP29966 332 aaPredicted RBP11.84□□□□□ -0.51
SH3TC2-215ENST00000515425 GSDMDP57764 484 aa11.84□□□□□ -0.51
SH3TC2-215ENST00000515425 FTOQ9C0B1 505 aaKnown RBP eCLIP11.84□□□□□ -0.51
SH3TC2-215ENST00000515425 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.84□□□□□ -0.51
SH3TC2-215ENST00000515425 TBC1D2BQ9UPU7 963 aa11.84□□□□□ -0.51
SH3TC2-215ENST00000515425 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.83□□□□□ -0.52
SH3TC2-215ENST00000515425 ELP1O95163 1332 aa11.83□□□□□ -0.52
SH3TC2-215ENST00000515425 LMOD1P29536 600 aaPredicted RBP11.83□□□□□ -0.52
SH3TC2-215ENST00000515425 FAM160A1Q05DH4 1040 aa11.83□□□□□ -0.52
SH3TC2-215ENST00000515425 MTX1Q13505 466 aa11.83□□□□□ -0.52
SH3TC2-215ENST00000515425 KBTBD3Q8NAB2 608 aa11.83□□□□□ -0.52
SH3TC2-215ENST00000515425 USP28Q96RU2 1077 aa11.83□□□□□ -0.52
SH3TC2-215ENST00000515425 BTG4Q9NY30 223 aa11.83□□□□□ -0.52
SH3TC2-215ENST00000515425 ADCY9O60503 1353 aa11.83□□□□□ -0.52
SH3TC2-215ENST00000515425 CYP21A2P08686 494 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms