RNA–Protein interactions for RNA: ENST00000515365.1

HERC6-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 638 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-208ENST00000515365 GLIS3Q8NEA6 775 aa6.31□□□□□ -1.4
HERC6-208ENST00000515365 NUCKS1Q9H1E3 243 aaKnown RBP6.31□□□□□ -1.4
HERC6-208ENST00000515365 ATP13A2Q9NQ11 1180 aa6.31□□□□□ -1.4
HERC6-208ENST00000515365 STRN4Q9NRL3 753 aa6.31□□□□□ -1.4
HERC6-208ENST00000515365 LATS2Q9NRM7 1088 aa6.31□□□□□ -1.4
HERC6-208ENST00000515365 NDFIP2Q9NV92 336 aa6.31□□□□□ -1.4
HERC6-208ENST00000515365 ZFATQ9P243 1243 aa6.31□□□□□ -1.4
HERC6-208ENST00000515365 KANSL3Q9P2N6 904 aa6.31□□□□□ -1.4
HERC6-208ENST00000515365 GGT7Q9UJ14 662 aa6.31□□□□□ -1.4
HERC6-208ENST00000515365 SALL4Q9UJQ4 1053 aa6.31□□□□□ -1.4
HERC6-208ENST00000515365 HCN2Q9UL51 889 aa6.31□□□□□ -1.4
HERC6-208ENST00000515365 TRAK1Q9UPV9 953 aa6.31□□□□□ -1.4
HERC6-208ENST00000515365 PHF20L1A8MW92 1017 aa6.3□□□□□ -1.4
HERC6-208ENST00000515365 NRG2O14511 850 aaPredicted RBP6.3□□□□□ -1.4
HERC6-208ENST00000515365 KHNYNO15037 678 aaKnown RBP6.3□□□□□ -1.4
HERC6-208ENST00000515365 RARAP10276 462 aa6.3□□□□□ -1.4
HERC6-208ENST00000515365 MAPTP10636 758 aaKnown RBP6.3□□□□□ -1.4
HERC6-208ENST00000515365 GSTT1P30711 240 aa6.3□□□□□ -1.4
HERC6-208ENST00000515365 PTSQ03393 145 aa6.3□□□□□ -1.4
HERC6-208ENST00000515365 GNL2Q13823 731 aaKnown RBP6.3□□□□□ -1.4
HERC6-208ENST00000515365 PRPF40BQ6NWY9 871 aaKnown RBP6.3□□□□□ -1.4
HERC6-208ENST00000515365 ERMP1Q7Z2K6 904 aa6.3□□□□□ -1.4
HERC6-208ENST00000515365 C3orf58Q8NDZ4 430 aa6.3□□□□□ -1.4
HERC6-208ENST00000515365 GMLQ99445 158 aa6.3□□□□□ -1.4
HERC6-208ENST00000515365 EHD4Q9H223 541 aa6.3□□□□□ -1.4
HERC6-208ENST00000515365 PPP1R1BQ9UD71 204 aaPredicted RBP6.3□□□□□ -1.4
HERC6-208ENST00000515365 SOBPA7XYQ1 873 aa6.29□□□□□ -1.4
HERC6-208ENST00000515365 H7C1W4 665 aa6.29□□□□□ -1.4
HERC6-208ENST00000515365 BNIP3LO60238 219 aa6.29□□□□□ -1.4
HERC6-208ENST00000515365 GFRA3O60609 400 aa6.29□□□□□ -1.4
HERC6-208ENST00000515365 HOXD8P13378 290 aaPredicted RBP6.29□□□□□ -1.4
HERC6-208ENST00000515365 GRIN2CQ14957 1233 aa6.29□□□□□ -1.4
HERC6-208ENST00000515365 DBN1Q16643 649 aa6.29□□□□□ -1.4
HERC6-208ENST00000515365 TANGO6Q9C0B7 1094 aa6.29□□□□□ -1.4
HERC6-208ENST00000515365 EFCC1Q9HA90 598 aa6.29□□□□□ -1.4
HERC6-208ENST00000515365 AAASQ9NRG9 546 aa6.29□□□□□ -1.4
HERC6-208ENST00000515365 PPP4R2Q9NY27 417 aa6.29□□□□□ -1.4
HERC6-208ENST00000515365 PRKAG2Q9UGJ0 569 aa6.29□□□□□ -1.4
HERC6-208ENST00000515365 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.29□□□□□ -1.4
HERC6-208ENST00000515365 EIF4G1Q04637 1599 aaKnown RBP6.28□□□□□ -1.4
HERC6-208ENST00000515365 KIF4AO95239 1232 aa6.28□□□□□ -1.4
HERC6-208ENST00000515365 MAP3K6O95382 1288 aa6.28□□□□□ -1.4
HERC6-208ENST00000515365 NFKB1P19838 968 aa6.28□□□□□ -1.4
HERC6-208ENST00000515365 SOX18P35713 384 aa6.28□□□□□ -1.4
HERC6-208ENST00000515365 SPEM2Q0P670 501 aa6.28□□□□□ -1.4
HERC6-208ENST00000515365 TRIM22Q8IYM9 498 aa6.28□□□□□ -1.4
HERC6-208ENST00000515365 ANKRD24Q8TF21 1146 aa6.28□□□□□ -1.4
HERC6-208ENST00000515365 PNMA5Q96PV4 448 aa6.28□□□□□ -1.4
HERC6-208ENST00000515365 NOC4LQ9BVI4 516 aaKnown RBP6.28□□□□□ -1.4
HERC6-208ENST00000515365 CUEDC1Q9NWM3 386 aaPredicted RBP6.28□□□□□ -1.4
HERC6-208ENST00000515365 TLR7Q9NYK1 1049 aaKnown RBP6.28□□□□□ -1.4
HERC6-208ENST00000515365 MARK1Q9P0L2 795 aa6.28□□□□□ -1.4
HERC6-208ENST00000515365 INPP5FQ9Y2H2 1132 aa6.28□□□□□ -1.4
HERC6-208ENST00000515365 SYNJ2O15056 1496 aa6.28□□□□□ -1.4
HERC6-208ENST00000515365 ST8SIA5O15466 376 aa6.27□□□□□ -1.41
HERC6-208ENST00000515365 PSAPP07602 524 aa6.27□□□□□ -1.41
HERC6-208ENST00000515365 FCGRTP55899 365 aa6.27□□□□□ -1.41
HERC6-208ENST00000515365 COL13A1Q5TAT6 717 aaPredicted RBP6.27□□□□□ -1.41
HERC6-208ENST00000515365 CCDC155Q8N6L0 562 aa6.27□□□□□ -1.41
HERC6-208ENST00000515365 CNTNAP3BQ96NU0 1288 aa6.27□□□□□ -1.41
HERC6-208ENST00000515365 TCF12Q99081 682 aa6.27□□□□□ -1.41
HERC6-208ENST00000515365 SLC30A3Q99726 388 aa6.27□□□□□ -1.41
HERC6-208ENST00000515365 OXCT2Q9BYC2 517 aaPredicted RBP6.27□□□□□ -1.41
HERC6-208ENST00000515365 CNTNAP3Q9BZ76 1288 aa6.27□□□□□ -1.41
HERC6-208ENST00000515365 ABCB6Q9NP58 842 aa6.27□□□□□ -1.41
HERC6-208ENST00000515365 COPRSQ9NQ92 184 aa6.27□□□□□ -1.41
HERC6-208ENST00000515365 PPM1HQ9ULR3 514 aa6.27□□□□□ -1.41
HERC6-208ENST00000515365 TTF2Q9UNY4 1162 aaKnown RBP6.27□□□□□ -1.41
HERC6-208ENST00000515365 TMEM238LA0A1B0GVL6 79 aa6.26□□□□□ -1.41
HERC6-208ENST00000515365 XRCC5P13010 732 aaKnown RBP6.26□□□□□ -1.41
HERC6-208ENST00000515365 GJA8P48165 433 aa6.26□□□□□ -1.41
HERC6-208ENST00000515365 MAP3K10Q02779 954 aa6.26□□□□□ -1.41
HERC6-208ENST00000515365 PLAURQ03405 335 aa6.26□□□□□ -1.41
HERC6-208ENST00000515365 HYAL2Q12891 473 aa6.26□□□□□ -1.41
HERC6-208ENST00000515365 NCAPG2Q86XI2 1143 aa6.26□□□□□ -1.41
HERC6-208ENST00000515365 CCNJLQ8IV13 435 aa6.26□□□□□ -1.41
HERC6-208ENST00000515365 ZNF837Q96EG3 531 aaPredicted RBP6.26□□□□□ -1.41
HERC6-208ENST00000515365 ABHD17AQ96GS6 310 aa6.26□□□□□ -1.41
HERC6-208ENST00000515365 GMCL1Q96IK5 515 aa6.26□□□□□ -1.41
HERC6-208ENST00000515365 ZKSCAN3Q9BRR0 538 aa6.26□□□□□ -1.41
HERC6-208ENST00000515365 RSRP1Q9BUV0 290 aa6.26□□□□□ -1.41
HERC6-208ENST00000515365 LIN7BQ9HAP6 207 aa6.26□□□□□ -1.41
HERC6-208ENST00000515365 DACH1Q9UI36 760 aa6.26□□□□□ -1.41
HERC6-208ENST00000515365 ACPPP15309 386 aa6.25□□□□□ -1.41
HERC6-208ENST00000515365 ATP2B1P20020 1258 aa6.25□□□□□ -1.41
HERC6-208ENST00000515365 CD33P20138 364 aa6.25□□□□□ -1.41
HERC6-208ENST00000515365 DNAJA1P31689 397 aaKnown RBP6.25□□□□□ -1.41
HERC6-208ENST00000515365 ARID5AQ03989 594 aa6.25□□□□□ -1.41
HERC6-208ENST00000515365 FAM182BQ5T319 152 aa6.25□□□□□ -1.41
HERC6-208ENST00000515365 DHX32Q7L7V1 743 aaKnown RBP6.25□□□□□ -1.41
HERC6-208ENST00000515365 CEP120Q8N960 986 aa6.25□□□□□ -1.41
HERC6-208ENST00000515365 BHMTQ93088 406 aa6.25□□□□□ -1.41
HERC6-208ENST00000515365 ARMC5Q96C12 935 aa6.25□□□□□ -1.41
HERC6-208ENST00000515365 OSMRQ99650 979 aa6.25□□□□□ -1.41
HERC6-208ENST00000515365 KBTBD4Q9NVX7 518 aa6.25□□□□□ -1.41
HERC6-208ENST00000515365 ATXN7L1Q9ULK2 861 aaPredicted RBP6.25□□□□□ -1.41
HERC6-208ENST00000515365 BAZ1AQ9NRL2 1556 aaPredicted RBP6.25□□□□□ -1.41
HERC6-208ENST00000515365 ITGA6P23229 1130 aa6.24□□□□□ -1.41
HERC6-208ENST00000515365 NRLP54845 237 aa6.24□□□□□ -1.41
HERC6-208ENST00000515365 PAK2Q13177 524 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms