RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 PTPN12Q05209 780 aaKnown RBP15.86■□□□□ 0.13
SMAD5-210ENST00000515005 DDX46Q7L014 1031 aaKnown RBP15.86■□□□□ 0.13
SMAD5-210ENST00000515005 MCM10Q7L590 875 aa15.86■□□□□ 0.13
SMAD5-210ENST00000515005 ERO1AQ96HE7 468 aa15.86■□□□□ 0.13
SMAD5-210ENST00000515005 UTP14AQ9BVJ6 771 aaKnown RBP15.86■□□□□ 0.13
SMAD5-210ENST00000515005 POLLQ9UGP5 575 aa15.86■□□□□ 0.13
SMAD5-210ENST00000515005 NSFL1CQ9UNZ2 370 aaKnown RBP15.86■□□□□ 0.13
SMAD5-210ENST00000515005 KNSTRNQ9Y448 316 aa15.86■□□□□ 0.13
SMAD5-210ENST00000515005 DDX60Q8IY21 1712 aaKnown RBP15.85■□□□□ 0.13
SMAD5-210ENST00000515005 C6orf229H3BNL8 230 aa15.85■□□□□ 0.13
SMAD5-210ENST00000515005 MYL6BP14649 208 aa15.85■□□□□ 0.13
SMAD5-210ENST00000515005 PARP10Q53GL7 1025 aa15.85■□□□□ 0.13
SMAD5-210ENST00000515005 SPRYD7Q5W111 196 aa15.85■□□□□ 0.13
SMAD5-210ENST00000515005 GIGYF2Q6Y7W6 1299 aaKnown RBP15.85■□□□□ 0.13
SMAD5-210ENST00000515005 IFNL1Q8IU54 200 aa15.85■□□□□ 0.13
SMAD5-210ENST00000515005 PRO3102Q9H379 93 aa15.85■□□□□ 0.13
SMAD5-210ENST00000515005 EFCC1Q9HA90 598 aa15.85■□□□□ 0.13
SMAD5-210ENST00000515005 TCIRG1Q13488 830 aa15.84■□□□□ 0.13
SMAD5-210ENST00000515005 SLC4A8Q2Y0W8 1093 aa15.84■□□□□ 0.13
SMAD5-210ENST00000515005 AMER1Q5JTC6 1135 aaPredicted RBP15.84■□□□□ 0.13
SMAD5-210ENST00000515005 SOX1O00570 391 aaPredicted RBP15.83■□□□□ 0.12
SMAD5-210ENST00000515005 MYCP01106 439 aaPredicted RBP15.83■□□□□ 0.12
SMAD5-210ENST00000515005 MIS18AQ9NYP9 233 aa15.83■□□□□ 0.12
SMAD5-210ENST00000515005 KDM3BQ7LBC6 1761 aa15.82■□□□□ 0.12
SMAD5-210ENST00000515005 IGF2BP3O00425 579 aaKnown RBP eCLIP15.82■□□□□ 0.12
SMAD5-210ENST00000515005 GPSM2P81274 684 aa15.82■□□□□ 0.12
SMAD5-210ENST00000515005 DCTN1Q14203 1278 aa15.82■□□□□ 0.12
SMAD5-210ENST00000515005 TMC4Q7Z404 712 aa15.82■□□□□ 0.12
SMAD5-210ENST00000515005 DPF3Q92784 378 aa15.82■□□□□ 0.12
SMAD5-210ENST00000515005 LRCH3Q96II8 777 aa15.82■□□□□ 0.12
SMAD5-210ENST00000515005 COL25A1Q9BXS0 654 aaPredicted RBP15.82■□□□□ 0.12
SMAD5-210ENST00000515005 MYOZ2Q9NPC6 264 aa15.82■□□□□ 0.12
SMAD5-210ENST00000515005 COL3A1P02461 1466 aaPredicted RBP15.82■□□□□ 0.12
SMAD5-210ENST00000515005 LAMA3Q16787 3333 aa15.81■□□□□ 0.12
SMAD5-210ENST00000515005 WTIPA6NIX2 430 aaPredicted RBP15.81■□□□□ 0.12
SMAD5-210ENST00000515005 PRKG1Q13976 671 aa15.81■□□□□ 0.12
SMAD5-210ENST00000515005 MANSC4A6NHS7 340 aaPredicted RBP15.8■□□□□ 0.12
SMAD5-210ENST00000515005 PRKAR2BP31323 418 aa15.8■□□□□ 0.12
SMAD5-210ENST00000515005 SLC9C1Q4G0N8 1177 aa15.8■□□□□ 0.12
SMAD5-210ENST00000515005 RSBN1LQ6PCB5 846 aaPredicted RBP15.8■□□□□ 0.12
SMAD5-210ENST00000515005 AGBL3Q8NEM8 1001 aa15.8■□□□□ 0.12
SMAD5-210ENST00000515005 RTF1Q92541 710 aaKnown RBP15.8■□□□□ 0.12
SMAD5-210ENST00000515005 EYA3Q99504 573 aa15.8■□□□□ 0.12
SMAD5-210ENST00000515005 UNC80Q8N2C7 3258 aa15.79■□□□□ 0.12
SMAD5-210ENST00000515005 USP17L8P0C7I0 530 aa15.79■□□□□ 0.12
SMAD5-210ENST00000515005 NF2P35240 595 aa15.79■□□□□ 0.12
SMAD5-210ENST00000515005 INHBEP58166 350 aa15.79■□□□□ 0.12
SMAD5-210ENST00000515005 CRHR2Q13324 411 aa15.79■□□□□ 0.12
SMAD5-210ENST00000515005 NBPF9Q3BBW0 867 aa15.79■□□□□ 0.12
SMAD5-210ENST00000515005 LDLRAD1Q5T700 205 aa15.79■□□□□ 0.12
SMAD5-210ENST00000515005 NBPF11Q86T75 865 aa15.79■□□□□ 0.12
SMAD5-210ENST00000515005 TBC1D16Q8TBP0 767 aa15.79■□□□□ 0.12
SMAD5-210ENST00000515005 CELF1Q92879 486 aaKnown RBP15.79■□□□□ 0.12
SMAD5-210ENST00000515005 PTCH2Q9Y6C5 1203 aa15.79■□□□□ 0.12
SMAD5-210ENST00000515005 COL4A1P02462 1669 aa15.79■□□□□ 0.12
SMAD5-210ENST00000515005 SP3Q02447 781 aa15.78■□□□□ 0.12
SMAD5-210ENST00000515005 ARMC9Q7Z3E5 817 aa15.78■□□□□ 0.12
SMAD5-210ENST00000515005 GMLQ99445 158 aa15.78■□□□□ 0.12
SMAD5-210ENST00000515005 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.78■□□□□ 0.12
SMAD5-210ENST00000515005 PSME4Q14997 1843 aa15.78■□□□□ 0.12
SMAD5-210ENST00000515005 TAF7Q15545 349 aaPredicted RBP15.77■□□□□ 0.12
SMAD5-210ENST00000515005 NECTIN2Q92692 538 aa15.77■□□□□ 0.12
SMAD5-210ENST00000515005 ZC3H12CQ9C0D7 883 aaKnown RBP15.77■□□□□ 0.12
SMAD5-210ENST00000515005 ANGEL1Q9UNK9 670 aaKnown RBP15.77■□□□□ 0.12
SMAD5-210ENST00000515005 FZD1Q9UP38 647 aa15.77■□□□□ 0.12
SMAD5-210ENST00000515005 G3V3G9 751 aa15.76■□□□□ 0.11
SMAD5-210ENST00000515005 DCAF8Q5TAQ9 597 aa15.76■□□□□ 0.11
SMAD5-210ENST00000515005 NLRP10Q86W26 655 aa15.76■□□□□ 0.11
SMAD5-210ENST00000515005 THUMPD2Q9BTF0 503 aaKnown RBP15.76■□□□□ 0.11
SMAD5-210ENST00000515005 RSPH6AQ9H0K4 717 aa15.76■□□□□ 0.11
SMAD5-210ENST00000515005 LAMB1P07942 1786 aa15.75■□□□□ 0.11
SMAD5-210ENST00000515005 ZNF428Q96B54 188 aa15.75■□□□□ 0.11
SMAD5-210ENST00000515005 SLC10A4Q96EP9 437 aa15.75■□□□□ 0.11
SMAD5-210ENST00000515005 TRMT112Q9UI30 125 aaKnown RBP15.75■□□□□ 0.11
SMAD5-210ENST00000515005 SH3TC1Q8TE82 1336 aa15.74■□□□□ 0.11
SMAD5-210ENST00000515005 SH3TC2Q8TF17 1288 aa15.74■□□□□ 0.11
SMAD5-210ENST00000515005 SHISA4Q96DD7 197 aa15.74■□□□□ 0.11
SMAD5-210ENST00000515005 WNK4Q96J92 1243 aa15.74■□□□□ 0.11
SMAD5-210ENST00000515005 CLMNQ96JQ2 1002 aa15.74■□□□□ 0.11
SMAD5-210ENST00000515005 ZBTB48P10074 688 aaPredicted RBP15.73■□□□□ 0.11
SMAD5-210ENST00000515005 LRP10Q7Z4F1 713 aa15.73■□□□□ 0.11
SMAD5-210ENST00000515005 PTPN18Q99952 460 aa15.73■□□□□ 0.11
SMAD5-210ENST00000515005 A0A1W2PPC1 479 aa15.72■□□□□ 0.11
SMAD5-210ENST00000515005 WNT10BO00744 389 aa15.72■□□□□ 0.11
SMAD5-210ENST00000515005 EIF4A1P60842 406 aaKnown RBP15.72■□□□□ 0.11
SMAD5-210ENST00000515005 CC2D1BQ5T0F9 858 aaKnown RBP15.72■□□□□ 0.11
SMAD5-210ENST00000515005 ZBTB7BO15156 539 aaPredicted RBP15.71■□□□□ 0.11
SMAD5-210ENST00000515005 UFL1O94874 794 aa15.71■□□□□ 0.11
SMAD5-210ENST00000515005 OTUD7BQ6GQQ9 843 aa15.71■□□□□ 0.11
SMAD5-210ENST00000515005 DEFB123Q8N688 67 aa15.71■□□□□ 0.11
SMAD5-210ENST00000515005 STXBP5LQ9Y2K9 1186 aa15.71■□□□□ 0.11
SMAD5-210ENST00000515005 HTATSF1O43719 755 aaKnown RBP15.7■□□□□ 0.1
SMAD5-210ENST00000515005 SASH1O94885 1247 aa15.7■□□□□ 0.1
SMAD5-210ENST00000515005 ANXA1P04083 346 aa15.7■□□□□ 0.1
SMAD5-210ENST00000515005 PDIA6Q15084 440 aa15.7■□□□□ 0.1
SMAD5-210ENST00000515005 PROSER3Q2NL68 480 aa15.7■□□□□ 0.1
SMAD5-210ENST00000515005 Q7L0L9 218 aa15.7■□□□□ 0.1
SMAD5-210ENST00000515005 MXD3Q9BW11 206 aa15.7■□□□□ 0.1
SMAD5-210ENST00000515005 NR2E3Q9Y5X4 410 aa15.7■□□□□ 0.1
SMAD5-210ENST00000515005 ERBB4Q15303 1308 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms