RNA–Protein interactions for RNA: ENST00000514621.5

HIPK1-210, Transcript of homeodomain interacting protein kinase 1, human

TSL 4

Gene HIPK1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIPK1-210	ENST00000514621	C14orf37	Q86TY3	774 aa		9.54	□□□□□ -0.88
HIPK1-210	ENST00000514621	ANKLE2	Q86XL3	938 aa		9.54	□□□□□ -0.88
HIPK1-210	ENST00000514621	CCDC97	Q96F63	343 aa	Predicted RBP	9.54	□□□□□ -0.88
HIPK1-210	ENST00000514621	ADGRB3	O60242	1522 aa		9.54	□□□□□ -0.88
HIPK1-210	ENST00000514621	STRC	Q7RTU9	1775 aa		9.54	□□□□□ -0.88
HIPK1-210	ENST00000514621	BNIP3L	O60238	219 aa		9.53	□□□□□ -0.88
HIPK1-210	ENST00000514621	LTK	P29376	864 aa		9.53	□□□□□ -0.88
HIPK1-210	ENST00000514621	MAP2K3	P46734	347 aa		9.53	□□□□□ -0.88
HIPK1-210	ENST00000514621	TXNDC2	Q86VQ3	553 aa		9.53	□□□□□ -0.88
HIPK1-210	ENST00000514621	GAS2L2	Q8NHY3	880 aa		9.53	□□□□□ -0.88
HIPK1-210	ENST00000514621	HINFP	Q9BQA5	517 aa		9.53	□□□□□ -0.88
HIPK1-210	ENST00000514621	SERPINA10	Q9UK55	444 aa		9.53	□□□□□ -0.88
HIPK1-210	ENST00000514621	GJA3	Q9Y6H8	435 aa		9.53	□□□□□ -0.88
HIPK1-210	ENST00000514621	ARHGAP23	Q9P227	1491 aa		9.53	□□□□□ -0.88
HIPK1-210	ENST00000514621	TMEM131L	A2VDJ0	1609 aa		9.53	□□□□□ -0.88
HIPK1-210	ENST00000514621	SLIT1	O75093	1534 aa		9.52	□□□□□ -0.88
HIPK1-210	ENST00000514621	KDM5A	P29375	1690 aa	Known RBP	9.52	□□□□□ -0.89
HIPK1-210	ENST00000514621	BCR	P11274	1271 aa		9.52	□□□□□ -0.89
HIPK1-210	ENST00000514621	TXLNA	P40222	546 aa		9.52	□□□□□ -0.89
HIPK1-210	ENST00000514621	CCER1	Q8TC90	406 aa	Predicted RBP	9.52	□□□□□ -0.89
HIPK1-210	ENST00000514621	ZIC5	Q96T25	663 aa		9.52	□□□□□ -0.89
HIPK1-210	ENST00000514621	PCDHGC4	Q9Y5F7	938 aa		9.52	□□□□□ -0.89
HIPK1-210	ENST00000514621	GPC6	Q9Y625	555 aa	Predicted RBP	9.52	□□□□□ -0.89
HIPK1-210	ENST00000514621	CLTCL1	P53675	1640 aa		9.52	□□□□□ -0.89
HIPK1-210	ENST00000514621	DHX57	Q6P158	1386 aa	Known RBP	9.51	□□□□□ -0.89
HIPK1-210	ENST00000514621	ATAD2	Q6PL18	1390 aa		9.51	□□□□□ -0.89
HIPK1-210	ENST00000514621	ANKRD30B	Q9BXX2	1392 aa		9.51	□□□□□ -0.89
HIPK1-210	ENST00000514621	RNF225	M0QZC1	329 aa	Predicted RBP	9.51	□□□□□ -0.89
HIPK1-210	ENST00000514621	EML1	O00423	815 aa		9.51	□□□□□ -0.89
HIPK1-210	ENST00000514621	PPP1R12B	O60237	982 aa	Predicted RBP	9.51	□□□□□ -0.89
HIPK1-210	ENST00000514621	FGFR3	P22607	806 aa		9.51	□□□□□ -0.89
HIPK1-210	ENST00000514621	HIRA	P54198	1017 aa	Predicted RBP	9.51	□□□□□ -0.89
HIPK1-210	ENST00000514621	CDCA8	Q53HL2	280 aa		9.51	□□□□□ -0.89
HIPK1-210	ENST00000514621	FAM200A	Q8TCP9	573 aa		9.51	□□□□□ -0.89
HIPK1-210	ENST00000514621	SCG3	Q8WXD2	468 aa	Known RBP	9.51	□□□□□ -0.89
HIPK1-210	ENST00000514621	OXCT2	Q9BYC2	517 aa	Predicted RBP	9.51	□□□□□ -0.89
HIPK1-210	ENST00000514621	ZCCHC2	Q9C0B9	1178 aa	Known RBP	9.51	□□□□□ -0.89
HIPK1-210	ENST00000514621	EID1	Q9Y6B2	187 aa		9.51	□□□□□ -0.89
HIPK1-210	ENST00000514621	CCDC144A	A2RUR9	1427 aa		9.5	□□□□□ -0.89
HIPK1-210	ENST00000514621	ZFYVE9	O95405	1425 aa		9.5	□□□□□ -0.89
HIPK1-210	ENST00000514621	ATXN7	O15265	892 aa	Predicted RBP	9.5	□□□□□ -0.89
HIPK1-210	ENST00000514621	C1orf53	Q5VUE5	145 aa		9.5	□□□□□ -0.89
HIPK1-210	ENST00000514621	STAG2	Q8N3U4	1231 aa		9.5	□□□□□ -0.89
HIPK1-210	ENST00000514621	ARX	Q96QS3	562 aa		9.5	□□□□□ -0.89
HIPK1-210	ENST00000514621	NEUROD4	Q9HD90	331 aa		9.5	□□□□□ -0.89
HIPK1-210	ENST00000514621	LRRC4B	Q9NT99	713 aa		9.5	□□□□□ -0.89
HIPK1-210	ENST00000514621	SCAF11	Q99590	1463 aa	Known RBP	9.5	□□□□□ -0.89
HIPK1-210	ENST00000514621	NEURL4	Q96JN8	1562 aa		9.5	□□□□□ -0.89
HIPK1-210	ENST00000514621	NPHP4	O75161	1426 aa	Predicted RBP	9.49	□□□□□ -0.89
HIPK1-210	ENST00000514621	RIMS2	Q9UQ26	1411 aa		9.49	□□□□□ -0.89
HIPK1-210	ENST00000514621	MED14	O60244	1454 aa		9.49	□□□□□ -0.89
HIPK1-210	ENST00000514621	C2CD2L	O14523	706 aa		9.49	□□□□□ -0.89
HIPK1-210	ENST00000514621	C21orf2	O43822	256 aa		9.49	□□□□□ -0.89
HIPK1-210	ENST00000514621	MARS	P56192	900 aa	Known RBP	9.49	□□□□□ -0.89
HIPK1-210	ENST00000514621	ZNF326	Q5BKZ1	582 aa	Known RBP	9.49	□□□□□ -0.89
HIPK1-210	ENST00000514621	SH3PXD2A	Q5TCZ1	1133 aa		9.49	□□□□□ -0.89
HIPK1-210	ENST00000514621	POTEA	Q6S8J7	498 aa		9.49	□□□□□ -0.89
HIPK1-210	ENST00000514621	KLRG1	Q96E93	195 aa		9.49	□□□□□ -0.89
HIPK1-210	ENST00000514621	ENAM	Q9NRM1	1142 aa		9.49	□□□□□ -0.89
HIPK1-210	ENST00000514621	HCN2	Q9UL51	889 aa		9.49	□□□□□ -0.89
HIPK1-210	ENST00000514621	MYO5B	Q9ULV0	1848 aa		9.48	□□□□□ -0.89
HIPK1-210	ENST00000514621	OIP5	O43482	229 aa		9.48	□□□□□ -0.89
HIPK1-210	ENST00000514621	BMP4	P12644	408 aa		9.48	□□□□□ -0.89
HIPK1-210	ENST00000514621	CTBS	Q01459	385 aa		9.48	□□□□□ -0.89
HIPK1-210	ENST00000514621	ERICH6	Q7L0X2	663 aa		9.48	□□□□□ -0.89
HIPK1-210	ENST00000514621	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	9.48	□□□□□ -0.89
HIPK1-210	ENST00000514621	RHPN1	Q8TCX5	695 aa		9.48	□□□□□ -0.89
HIPK1-210	ENST00000514621	NOVA2	Q9UNW9	492 aa	Known RBP	9.48	□□□□□ -0.89
HIPK1-210	ENST00000514621	HCN4	Q9Y3Q4	1203 aa		9.48	□□□□□ -0.89
HIPK1-210	ENST00000514621	SPATA31E1	Q6ZUB1	1445 aa		9.48	□□□□□ -0.89
HIPK1-210	ENST00000514621	DCDC2B	A2VCK2	349 aa		9.47	□□□□□ -0.89
HIPK1-210	ENST00000514621	PPP1R15A	O75807	674 aa	Predicted RBP	9.47	□□□□□ -0.89
HIPK1-210	ENST00000514621	IGFBP4	P22692	258 aa		9.47	□□□□□ -0.89
HIPK1-210	ENST00000514621	RASSF7	Q02833	373 aa		9.47	□□□□□ -0.89
HIPK1-210	ENST00000514621	RGL3	Q3MIN7	710 aa		9.47	□□□□□ -0.89
HIPK1-210	ENST00000514621	SAMD5	Q5TGI4	173 aa		9.47	□□□□□ -0.89
HIPK1-210	ENST00000514621	C2orf49	Q9BVC5	232 aa	Predicted RBP	9.47	□□□□□ -0.89
HIPK1-210	ENST00000514621	PHACTR1	Q9C0D0	580 aa		9.47	□□□□□ -0.89
HIPK1-210	ENST00000514621	POLR1A	O95602	1720 aa	Predicted RBP	9.47	□□□□□ -0.89
HIPK1-210	ENST00000514621	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	9.46	□□□□□ -0.9
HIPK1-210	ENST00000514621	TNP2	Q05952	138 aa		9.46	□□□□□ -0.9
HIPK1-210	ENST00000514621	ELOA	Q14241	798 aa	Known RBP	9.46	□□□□□ -0.9
HIPK1-210	ENST00000514621	C1orf229	Q6ZS94	237 aa	Predicted RBP	9.46	□□□□□ -0.9
HIPK1-210	ENST00000514621	SCARF2	Q96GP6	870 aa	Predicted RBP	9.46	□□□□□ -0.9
HIPK1-210	ENST00000514621	RPGRIP1L	Q68CZ1	1315 aa		9.46	□□□□□ -0.9
HIPK1-210	ENST00000514621	PLEKHG1	Q9ULL1	1385 aa		9.46	□□□□□ -0.9
HIPK1-210	ENST00000514621	KIF1B	O60333	1816 aa		9.45	□□□□□ -0.9
HIPK1-210	ENST00000514621	KHNYN	O15037	678 aa	Known RBP	9.45	□□□□□ -0.9
HIPK1-210	ENST00000514621	FAM157B	P0CG42	384 aa		9.45	□□□□□ -0.9
HIPK1-210	ENST00000514621	MAPT	P10636	758 aa	Known RBP	9.45	□□□□□ -0.9
HIPK1-210	ENST00000514621	IRS1	P35568	1242 aa		9.45	□□□□□ -0.9
HIPK1-210	ENST00000514621	SRPK2	P78362	688 aa	Known RBP	9.45	□□□□□ -0.9
HIPK1-210	ENST00000514621	LRRC69	Q6ZNQ3	347 aa		9.45	□□□□□ -0.9
HIPK1-210	ENST00000514621	NEDD1	Q8NHV4	660 aa		9.45	□□□□□ -0.9
HIPK1-210	ENST00000514621	C7orf43	Q8WVR3	580 aa		9.45	□□□□□ -0.9
HIPK1-210	ENST00000514621	ANKIB1	Q9P2G1	1089 aa		9.45	□□□□□ -0.9
HIPK1-210	ENST00000514621	GDF2	Q9UK05	429 aa	Predicted RBP	9.45	□□□□□ -0.9
HIPK1-210	ENST00000514621	NEXMIF	Q5QGS0	1516 aa		9.45	□□□□□ -0.9
HIPK1-210	ENST00000514621	IQGAP1	P46940	1657 aa		9.45	□□□□□ -0.9
HIPK1-210	ENST00000514621	SHISA8	B8ZZ34	492 aa		9.44	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms