RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 RSRP1Q9BUV0 290 aa7.86□□□□□ -1.15
RFC1-216ENST00000514572 GSX2Q9BZM3 304 aa7.86□□□□□ -1.15
RFC1-216ENST00000514572 ABCB6Q9NP58 842 aa7.86□□□□□ -1.15
RFC1-216ENST00000514572 KBTBD4Q9NVX7 518 aa7.86□□□□□ -1.15
RFC1-216ENST00000514572 SALL4Q9UJQ4 1053 aa7.86□□□□□ -1.15
RFC1-216ENST00000514572 DNMT3LQ9UJW3 386 aa7.86□□□□□ -1.15
RFC1-216ENST00000514572 HCN2Q9UL51 889 aa7.86□□□□□ -1.15
RFC1-216ENST00000514572 PPM1HQ9ULR3 514 aa7.86□□□□□ -1.15
RFC1-216ENST00000514572 TRAK1Q9UPV9 953 aa7.86□□□□□ -1.15
RFC1-216ENST00000514572 KIF4AO95239 1232 aa7.85□□□□□ -1.15
RFC1-216ENST00000514572 EDN3P14138 238 aa7.85□□□□□ -1.15
RFC1-216ENST00000514572 HSP90B1P14625 803 aaKnown RBP7.85□□□□□ -1.15
RFC1-216ENST00000514572 SMCPP49901 116 aaPredicted RBP7.85□□□□□ -1.15
RFC1-216ENST00000514572 NOP9Q86U38 636 aaKnown RBP7.85□□□□□ -1.15
RFC1-216ENST00000514572 GPRASP2Q96D09 838 aa7.85□□□□□ -1.15
RFC1-216ENST00000514572 CNTNAP3BQ96NU0 1288 aa7.85□□□□□ -1.15
RFC1-216ENST00000514572 CNTNAP3Q9BZ76 1288 aa7.85□□□□□ -1.15
RFC1-216ENST00000514572 KCNH4Q9UQ05 1017 aa7.85□□□□□ -1.15
RFC1-216ENST00000514572 GJA3Q9Y6H8 435 aa7.85□□□□□ -1.15
RFC1-216ENST00000514572 FIGNL2A6NMB9 653 aa7.84□□□□□ -1.15
RFC1-216ENST00000514572 MMP20O60882 483 aa7.84□□□□□ -1.15
RFC1-216ENST00000514572 SCARF1Q14162 830 aa7.84□□□□□ -1.15
RFC1-216ENST00000514572 TTC39BQ5VTQ0 682 aaPredicted RBP7.84□□□□□ -1.15
RFC1-216ENST00000514572 CRIPAKQ8N1N5 446 aa7.84□□□□□ -1.15
RFC1-216ENST00000514572 ZNF775Q96BV0 537 aaPredicted RBP7.84□□□□□ -1.15
RFC1-216ENST00000514572 TCF12Q99081 682 aa7.84□□□□□ -1.15
RFC1-216ENST00000514572 KCNQ5Q9NR82 932 aa7.84□□□□□ -1.15
RFC1-216ENST00000514572 ZFATQ9P243 1243 aa7.84□□□□□ -1.15
RFC1-216ENST00000514572 KANSL3Q9P2N6 904 aa7.84□□□□□ -1.15
RFC1-216ENST00000514572 SASH3O75995 380 aa7.83□□□□□ -1.16
RFC1-216ENST00000514572 XRCC5P13010 732 aaKnown RBP7.83□□□□□ -1.16
RFC1-216ENST00000514572 SOX18P35713 384 aa7.83□□□□□ -1.16
RFC1-216ENST00000514572 SFSWAPQ12872 951 aaKnown RBP7.83□□□□□ -1.16
RFC1-216ENST00000514572 PGBD3Q8N328 593 aa7.83□□□□□ -1.16
RFC1-216ENST00000514572 NDFIP2Q9NV92 336 aa7.83□□□□□ -1.16
RFC1-216ENST00000514572 ADAMTS1Q9UHI8 967 aa7.83□□□□□ -1.16
RFC1-216ENST00000514572 DACH1Q9UI36 760 aa7.83□□□□□ -1.16
RFC1-216ENST00000514572 TTF2Q9UNY4 1162 aaKnown RBP7.83□□□□□ -1.16
RFC1-216ENST00000514572 AXIN1O15169 862 aa7.82□□□□□ -1.16
RFC1-216ENST00000514572 HMGB1P09429 215 aaKnown RBP7.82□□□□□ -1.16
RFC1-216ENST00000514572 TARSP26639 723 aaKnown RBP7.82□□□□□ -1.16
RFC1-216ENST00000514572 LAMC2Q13753 1193 aa7.82□□□□□ -1.16
RFC1-216ENST00000514572 CCINQ13939 588 aa7.82□□□□□ -1.16
RFC1-216ENST00000514572 CCDC144BQ3MJ40 725 aa7.82□□□□□ -1.16
RFC1-216ENST00000514572 EFHC2Q5JST6 749 aa7.82□□□□□ -1.16
RFC1-216ENST00000514572 CCNJLQ8IV13 435 aa7.82□□□□□ -1.16
RFC1-216ENST00000514572 RHOVQ96L33 236 aa7.82□□□□□ -1.16
RFC1-216ENST00000514572 ZFP42Q96MM3 310 aa7.82□□□□□ -1.16
RFC1-216ENST00000514572 HIRIP3Q9BW71 556 aaPredicted RBP7.82□□□□□ -1.16
RFC1-216ENST00000514572 OXCT2Q9BYC2 517 aaPredicted RBP7.82□□□□□ -1.16
RFC1-216ENST00000514572 EHD4Q9H223 541 aa7.82□□□□□ -1.16
RFC1-216ENST00000514572 TMEM238LA0A1B0GVL6 79 aa7.81□□□□□ -1.16
RFC1-216ENST00000514572 MAP3K6O95382 1288 aa7.81□□□□□ -1.16
RFC1-216ENST00000514572 TNP2Q05952 138 aa7.81□□□□□ -1.16
RFC1-216ENST00000514572 COL13A1Q5TAT6 717 aaPredicted RBP7.81□□□□□ -1.16
RFC1-216ENST00000514572 FIGNL1Q6PIW4 674 aa7.81□□□□□ -1.16
RFC1-216ENST00000514572 VPS37DQ86XT2 251 aa7.81□□□□□ -1.16
RFC1-216ENST00000514572 SEC16BQ96JE7 1060 aa7.81□□□□□ -1.16
RFC1-216ENST00000514572 TRIM56Q9BRZ2 755 aaKnown RBP7.81□□□□□ -1.16
RFC1-216ENST00000514572 EFCC1Q9HA90 598 aa7.81□□□□□ -1.16
RFC1-216ENST00000514572 STRN4Q9NRL3 753 aa7.81□□□□□ -1.16
RFC1-216ENST00000514572 PCDHGC4Q9Y5F7 938 aa7.81□□□□□ -1.16
RFC1-216ENST00000514572 ATXN7O15265 892 aaPredicted RBP7.8□□□□□ -1.16
RFC1-216ENST00000514572 FCGRTP55899 365 aa7.8□□□□□ -1.16
RFC1-216ENST00000514572 PWP1Q13610 501 aa7.8□□□□□ -1.16
RFC1-216ENST00000514572 CCDC85BQ15834 202 aaPredicted RBP7.8□□□□□ -1.16
RFC1-216ENST00000514572 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.8□□□□□ -1.161e-5■□□□□ 9.3
RFC1-216ENST00000514572 SOGA3Q5TF21 947 aa7.8□□□□□ -1.16
RFC1-216ENST00000514572 KIAA0825Q8IV33 1275 aa7.8□□□□□ -1.16
RFC1-216ENST00000514572 TMEM74Q96NL1 305 aa7.8□□□□□ -1.16
RFC1-216ENST00000514572 ZKSCAN3Q9BRR0 538 aa7.8□□□□□ -1.16
RFC1-216ENST00000514572 SPON2Q9BUD6 331 aa7.8□□□□□ -1.16
RFC1-216ENST00000514572 PIF1Q9H611 641 aa7.8□□□□□ -1.16
RFC1-216ENST00000514572 LIN7BQ9HAP6 207 aa7.8□□□□□ -1.16
RFC1-216ENST00000514572 TLR7Q9NYK1 1049 aaKnown RBP7.8□□□□□ -1.16
RFC1-216ENST00000514572 PHF20L1A8MW92 1017 aa7.79□□□□□ -1.16
RFC1-216ENST00000514572 GARTP22102 1010 aa7.79□□□□□ -1.16
RFC1-216ENST00000514572 ITPKAP23677 461 aa7.79□□□□□ -1.16
RFC1-216ENST00000514572 GRIN2CQ14957 1233 aa7.79□□□□□ -1.16
RFC1-216ENST00000514572 SV2BQ7L1I2 683 aa7.79□□□□□ -1.16
RFC1-216ENST00000514572 PHC3Q8NDX5 983 aa7.79□□□□□ -1.16
RFC1-216ENST00000514572 GAS2L1Q99501 681 aaPredicted RBP7.79□□□□□ -1.16
RFC1-216ENST00000514572 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.79□□□□□ -1.16
RFC1-216ENST00000514572 TBX22Q9Y458 520 aa7.79□□□□□ -1.16
RFC1-216ENST00000514572 NFKBIEO00221 500 aa7.78□□□□□ -1.16
RFC1-216ENST00000514572 RARAP10276 462 aa7.78□□□□□ -1.16
RFC1-216ENST00000514572 MAPTP10636 758 aaKnown RBP7.78□□□□□ -1.16
RFC1-216ENST00000514572 ACPPP15309 386 aa7.78□□□□□ -1.16
RFC1-216ENST00000514572 SERINC3Q13530 473 aa7.78□□□□□ -1.16
RFC1-216ENST00000514572 KRT25Q7Z3Z0 450 aa7.78□□□□□ -1.16
RFC1-216ENST00000514572 CEP120Q8N960 986 aa7.78□□□□□ -1.16
RFC1-216ENST00000514572 EAF1Q96JC9 268 aaPredicted RBP7.78□□□□□ -1.16
RFC1-216ENST00000514572 BHLHE41Q9C0J9 482 aaPredicted RBP7.78□□□□□ -1.16
RFC1-216ENST00000514572 DZANK1Q9NVP4 752 aa7.78□□□□□ -1.16
RFC1-216ENST00000514572 PPP4R2Q9NY27 417 aa7.78□□□□□ -1.16
RFC1-216ENST00000514572 GMPR2Q9P2T1 348 aaKnown RBP7.78□□□□□ -1.16
RFC1-216ENST00000514572 DCDC2BA2VCK2 349 aa7.77□□□□□ -1.17
RFC1-216ENST00000514572 SLC35F4A4IF30 521 aa7.77□□□□□ -1.17
RFC1-216ENST00000514572 GREM1O60565 184 aa7.77□□□□□ -1.17
RFC1-216ENST00000514572 STK10O94804 968 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms