RNA–Protein interactions for RNA: ENST00000513841.1

ARHGEF28-213, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 3

Gene ARHGEF28, Length 710 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-213ENST00000513841 LAMB2P55268 1798 aa14.66□□□□□ -0.06
ARHGEF28-213ENST00000513841 YDJCA8MPS7 323 aa14.66□□□□□ -0.06
ARHGEF28-213ENST00000513841 GRM8O00222 908 aa14.66□□□□□ -0.06
ARHGEF28-213ENST00000513841 UFL1O94874 794 aa14.66□□□□□ -0.06
ARHGEF28-213ENST00000513841 ITGA6P23229 1130 aa14.66□□□□□ -0.06
ARHGEF28-213ENST00000513841 ATP2B4P23634 1241 aa14.66□□□□□ -0.06
ARHGEF28-213ENST00000513841 SCNN1DP51172 638 aa14.66□□□□□ -0.06
ARHGEF28-213ENST00000513841 GPR101Q96P66 508 aaPredicted RBP14.66□□□□□ -0.06
ARHGEF28-213ENST00000513841 MINPP1Q9UNW1 487 aa14.66□□□□□ -0.06
ARHGEF28-213ENST00000513841 TIAM2Q8IVF5 1701 aa14.66□□□□□ -0.06
ARHGEF28-213ENST00000513841 DDX60Q8IY21 1712 aaKnown RBP14.66□□□□□ -0.06
ARHGEF28-213ENST00000513841 ANKRD18BA2A2Z9 1011 aa14.65□□□□□ -0.06
ARHGEF28-213ENST00000513841 GMPSP49915 693 aaPredicted RBP14.65□□□□□ -0.06
ARHGEF28-213ENST00000513841 FOXO4P98177 505 aa14.65□□□□□ -0.06
ARHGEF28-213ENST00000513841 ALDH1L2Q3SY69 923 aa14.65□□□□□ -0.06
ARHGEF28-213ENST00000513841 CNTROBQ8N137 903 aa14.65□□□□□ -0.06
ARHGEF28-213ENST00000513841 GPRC5DQ9NZD1 345 aa14.65□□□□□ -0.06
ARHGEF28-213ENST00000513841 CACNA1FO60840 1977 aa14.65□□□□□ -0.06
ARHGEF28-213ENST00000513841 XDHP47989 1333 aa14.65□□□□□ -0.06
ARHGEF28-213ENST00000513841 COL4A5P29400 1685 aa14.65□□□□□ -0.06
ARHGEF28-213ENST00000513841 RTL9Q8NET4 1388 aa14.64□□□□□ -0.07
ARHGEF28-213ENST00000513841 H7C1D1 291 aa14.64□□□□□ -0.07
ARHGEF28-213ENST00000513841 CT47B1P0C2W7 299 aaPredicted RBP14.64□□□□□ -0.07
ARHGEF28-213ENST00000513841 IFIT5Q13325 482 aaKnown RBP14.64□□□□□ -0.07
ARHGEF28-213ENST00000513841 LMBR1LQ6UX01 489 aa14.64□□□□□ -0.07
ARHGEF28-213ENST00000513841 USP50Q70EL3 339 aaPredicted RBP14.64□□□□□ -0.07
ARHGEF28-213ENST00000513841 KCNQ5Q9NR82 932 aa14.64□□□□□ -0.07
ARHGEF28-213ENST00000513841 CNOT7Q9UIV1 285 aaKnown RBP14.64□□□□□ -0.07
ARHGEF28-213ENST00000513841 CHMP3Q9Y3E7 222 aa14.64□□□□□ -0.07
ARHGEF28-213ENST00000513841 PTPRCP08575 1304 aa14.64□□□□□ -0.07
ARHGEF28-213ENST00000513841 WTIPA6NIX2 430 aaPredicted RBP14.63□□□□□ -0.07
ARHGEF28-213ENST00000513841 ECE2O60344 883 aa14.63□□□□□ -0.07
ARHGEF28-213ENST00000513841 ITGBL1O95965 494 aaPredicted RBP14.63□□□□□ -0.07
ARHGEF28-213ENST00000513841 FAM161AQ3B820 660 aa14.63□□□□□ -0.07
ARHGEF28-213ENST00000513841 MAP1SQ66K74 1059 aaPredicted RBP14.63□□□□□ -0.07
ARHGEF28-213ENST00000513841 ANKRD2Q9GZV1 360 aa14.63□□□□□ -0.07
ARHGEF28-213ENST00000513841 ADARB2Q9NS39 739 aaKnown RBP14.63□□□□□ -0.07
ARHGEF28-213ENST00000513841 SMC4Q9NTJ3 1288 aa14.63□□□□□ -0.07
ARHGEF28-213ENST00000513841 ZBTB12Q9Y330 459 aaPredicted RBP14.63□□□□□ -0.07
ARHGEF28-213ENST00000513841 PSMD14O00487 310 aa14.62□□□□□ -0.07
ARHGEF28-213ENST00000513841 CCT4P50991 539 aaKnown RBP14.62□□□□□ -0.07
ARHGEF28-213ENST00000513841 CCDC57Q2TAC2 916 aa14.62□□□□□ -0.07
ARHGEF28-213ENST00000513841 EPHA10Q5JZY3 1008 aa14.62□□□□□ -0.07
ARHGEF28-213ENST00000513841 DPF2Q92785 391 aa14.62□□□□□ -0.07
ARHGEF28-213ENST00000513841 LEMD3Q9Y2U8 911 aa14.62□□□□□ -0.07
ARHGEF28-213ENST00000513841 NBPF7P0C2Y1 421 aaPredicted RBP14.61□□□□□ -0.07
ARHGEF28-213ENST00000513841 TAF7LQ5H9L4 462 aa14.61□□□□□ -0.07
ARHGEF28-213ENST00000513841 NOB1Q9ULX3 412 aaKnown RBP14.61□□□□□ -0.07
ARHGEF28-213ENST00000513841 SCN4AP35499 1836 aa14.61□□□□□ -0.07
ARHGEF28-213ENST00000513841 PODNQ7Z5L7 613 aa14.6□□□□□ -0.07
ARHGEF28-213ENST00000513841 KLRG1Q96E93 195 aa14.6□□□□□ -0.07
ARHGEF28-213ENST00000513841 COL4A1P02462 1669 aa14.59□□□□□ -0.07
ARHGEF28-213ENST00000513841 VIL1P09327 827 aaKnown RBP14.59□□□□□ -0.07
ARHGEF28-213ENST00000513841 RPS12P25398 132 aaKnown RBP14.59□□□□□ -0.07
ARHGEF28-213ENST00000513841 KCNJ4P48050 445 aa14.59□□□□□ -0.07
ARHGEF28-213ENST00000513841 HNRNPUQ00839 825 aaKnown RBP eCLIP14.59□□□□□ -0.07
ARHGEF28-213ENST00000513841 CHRNDQ07001 517 aa14.59□□□□□ -0.07
ARHGEF28-213ENST00000513841 RBM26Q5T8P6 1007 aaKnown RBP14.59□□□□□ -0.07
ARHGEF28-213ENST00000513841 LDHAL6AQ6ZMR3 332 aa14.59□□□□□ -0.07
ARHGEF28-213ENST00000513841 MICALL2Q8IY33 904 aa14.59□□□□□ -0.07
ARHGEF28-213ENST00000513841 SUCLG2Q96I99 432 aa14.59□□□□□ -0.07
ARHGEF28-213ENST00000513841 ZNF594Q96JF6 807 aaPredicted RBP14.59□□□□□ -0.07
ARHGEF28-213ENST00000513841 CREBZFQ9NS37 354 aa14.59□□□□□ -0.07
ARHGEF28-213ENST00000513841 ZNF804BA4D1E1 1349 aa14.59□□□□□ -0.07
ARHGEF28-213ENST00000513841 PASKQ96RG2 1323 aa14.59□□□□□ -0.07
ARHGEF28-213ENST00000513841 TMEM88BA6NKF7 163 aa14.58□□□□□ -0.08
ARHGEF28-213ENST00000513841 TAF5LO75529 589 aa14.58□□□□□ -0.08
ARHGEF28-213ENST00000513841 RARSP54136 660 aaKnown RBP14.58□□□□□ -0.08
ARHGEF28-213ENST00000513841 HIRAP54198 1017 aaPredicted RBP14.58□□□□□ -0.08
ARHGEF28-213ENST00000513841 HELBQ8NG08 1087 aaPredicted RBP14.58□□□□□ -0.08
ARHGEF28-213ENST00000513841 ZC3H15Q8WU90 426 aaKnown RBP14.58□□□□□ -0.08
ARHGEF28-213ENST00000513841 KAZALD1Q96I82 304 aa14.58□□□□□ -0.08
ARHGEF28-213ENST00000513841 USP44Q9H0E7 712 aa14.58□□□□□ -0.08
ARHGEF28-213ENST00000513841 CNNM1Q9NRU3 951 aa14.58□□□□□ -0.08
ARHGEF28-213ENST00000513841 PGAP2Q9UHJ9 254 aa14.58□□□□□ -0.08
ARHGEF28-213ENST00000513841 UTYO14607 1347 aa14.58□□□□□ -0.08
ARHGEF28-213ENST00000513841 SHTN1A0MZ66 631 aa14.57□□□□□ -0.08
ARHGEF28-213ENST00000513841 USP17L3A6NCW0 530 aa14.57□□□□□ -0.08
ARHGEF28-213ENST00000513841 USP17L4A6NCW7 530 aa14.57□□□□□ -0.08
ARHGEF28-213ENST00000513841 PLIN1O60240 522 aa14.57□□□□□ -0.08
ARHGEF28-213ENST00000513841 BRPF1P55201 1214 aaPredicted RBP14.57□□□□□ -0.08
ARHGEF28-213ENST00000513841 USP17L1Q7RTZ2 530 aa14.57□□□□□ -0.08
ARHGEF28-213ENST00000513841 SAMD7Q7Z3H4 446 aa14.57□□□□□ -0.08
ARHGEF28-213ENST00000513841 TXNRD3Q86VQ6 643 aa14.57□□□□□ -0.08
ARHGEF28-213ENST00000513841 API5Q9BZZ5 524 aaKnown RBP14.57□□□□□ -0.08
ARHGEF28-213ENST00000513841 COA1Q9GZY4 146 aa14.57□□□□□ -0.08
ARHGEF28-213ENST00000513841 DUOX1Q9NRD9 1551 aa14.56□□□□□ -0.08
ARHGEF28-213ENST00000513841 TBC1D10BQ4KMP7 808 aaPredicted RBP14.56□□□□□ -0.08
ARHGEF28-213ENST00000513841 RSBN1LQ6PCB5 846 aaPredicted RBP14.56□□□□□ -0.08
ARHGEF28-213ENST00000513841 AGBL3Q8NEM8 1001 aa14.56□□□□□ -0.08
ARHGEF28-213ENST00000513841 TRPM4Q8TD43 1214 aa14.55□□□□□ -0.08
ARHGEF28-213ENST00000513841 ARHGAP45Q92619 1136 aa14.55□□□□□ -0.08
ARHGEF28-213ENST00000513841 BICC1Q9H694 974 aaKnown RBP14.55□□□□□ -0.08
ARHGEF28-213ENST00000513841 MKRN1Q9UHC7 482 aaKnown RBP14.55□□□□□ -0.08
ARHGEF28-213ENST00000513841 MED23Q9ULK4 1368 aa14.55□□□□□ -0.08
ARHGEF28-213ENST00000513841 LRRC37AA6NMS7 1700 aa14.55□□□□□ -0.08
ARHGEF28-213ENST00000513841 SNAP23O00161 211 aa14.54□□□□□ -0.08
ARHGEF28-213ENST00000513841 TRAF5O00463 557 aa14.54□□□□□ -0.08
ARHGEF28-213ENST00000513841 IPO8O15397 1037 aaKnown RBP14.54□□□□□ -0.08
ARHGEF28-213ENST00000513841 USP17L8P0C7I0 530 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms