RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 GRAPLQ8TC17 118 aaPredicted RBP11.91□□□□□ -0.5
CAST-239ENST00000513666 DLG5Q8TDM6 1919 aa11.91□□□□□ -0.5
CAST-239ENST00000513666 RPS12P25398 132 aaKnown RBP11.91□□□□□ -0.5
CAST-239ENST00000513666 DDX46Q7L014 1031 aaKnown RBP11.91□□□□□ -0.5
CAST-239ENST00000513666 TMC4Q7Z404 712 aa11.91□□□□□ -0.5
CAST-239ENST00000513666 GCC1Q96CN9 775 aa11.91□□□□□ -0.5
CAST-239ENST00000513666 TAF1P21675 1872 aa11.9□□□□□ -0.5
CAST-239ENST00000513666 LRP10Q7Z4F1 713 aa11.9□□□□□ -0.5
CAST-239ENST00000513666 PHF12Q96QT6 1004 aa11.9□□□□□ -0.5
CAST-239ENST00000513666 DDX60Q8IY21 1712 aaKnown RBP11.9□□□□□ -0.51
CAST-239ENST00000513666 HCLS1P14317 486 aaPredicted RBP11.89□□□□□ -0.51
CAST-239ENST00000513666 WASHC4Q2M389 1173 aa11.89□□□□□ -0.51
CAST-239ENST00000513666 RBM26Q5T8P6 1007 aaKnown RBP11.89□□□□□ -0.51
CAST-239ENST00000513666 RASAL3Q86YV0 1011 aa11.89□□□□□ -0.51
CAST-239ENST00000513666 SULF1Q8IWU6 871 aa11.89□□□□□ -0.51
CAST-239ENST00000513666 PCGF6Q9BYE7 350 aa11.89□□□□□ -0.51
CAST-239ENST00000513666 DBNDD1Q9H9R9 158 aa11.89□□□□□ -0.51
CAST-239ENST00000513666 GALR2O43603 387 aaPredicted RBP11.88□□□□□ -0.51
CAST-239ENST00000513666 KIF4BQ2VIQ3 1234 aa11.88□□□□□ -0.51
CAST-239ENST00000513666 CDCA5Q96FF9 252 aa11.88□□□□□ -0.51
CAST-239ENST00000513666 THUMPD2Q9BTF0 503 aaKnown RBP11.88□□□□□ -0.51
CAST-239ENST00000513666 GGA3Q9NZ52 723 aa11.88□□□□□ -0.51
CAST-239ENST00000513666 RTL9Q8NET4 1388 aa11.88□□□□□ -0.51
CAST-239ENST00000513666 PAPPA2Q9BXP8 1791 aa11.87□□□□□ -0.51
CAST-239ENST00000513666 PDIA6Q15084 440 aa11.87□□□□□ -0.51
CAST-239ENST00000513666 HSP90AB3PQ58FF7 597 aa11.87□□□□□ -0.51
CAST-239ENST00000513666 NLRP10Q86W26 655 aa11.87□□□□□ -0.51
CAST-239ENST00000513666 ZNF296Q8WUU4 475 aaPredicted RBP11.87□□□□□ -0.51
CAST-239ENST00000513666 HDAC9Q9UKV0 1011 aa11.87□□□□□ -0.51
CAST-239ENST00000513666 SH3TC1Q8TE82 1336 aa11.87□□□□□ -0.51
CAST-239ENST00000513666 ECE2O60344 883 aa11.86□□□□□ -0.51
CAST-239ENST00000513666 FKBP1BP68106 108 aa11.86□□□□□ -0.51
CAST-239ENST00000513666 PLCD3Q8N3E9 789 aa11.86□□□□□ -0.51
CAST-239ENST00000513666 KCNQ5Q9NR82 932 aa11.86□□□□□ -0.51
CAST-239ENST00000513666 TRMT112Q9UI30 125 aaKnown RBP11.86□□□□□ -0.51
CAST-239ENST00000513666 ASTN2O75129 1339 aaPredicted RBP11.86□□□□□ -0.51
CAST-239ENST00000513666 RIMBP2O15034 1052 aa11.86□□□□□ -0.51
CAST-239ENST00000513666 PPP2R1AP30153 589 aa11.86□□□□□ -0.51
CAST-239ENST00000513666 PROSER3Q2NL68 480 aa11.86□□□□□ -0.51
CAST-239ENST00000513666 NOM1Q5C9Z4 860 aaKnown RBP11.86□□□□□ -0.51
CAST-239ENST00000513666 FBXO46Q6PJ61 603 aaPredicted RBP11.86□□□□□ -0.51
CAST-239ENST00000513666 POLLQ9UGP5 575 aa11.86□□□□□ -0.51
CAST-239ENST00000513666 NSFL1CQ9UNZ2 370 aaKnown RBP11.86□□□□□ -0.51
CAST-239ENST00000513666 SCN9AQ15858 1988 aa11.85□□□□□ -0.51
CAST-239ENST00000513666 C6orf229H3BNL8 230 aa11.85□□□□□ -0.51
CAST-239ENST00000513666 TBC1D8O95759 1140 aa11.85□□□□□ -0.51
CAST-239ENST00000513666 NEFMP07197 916 aa11.85□□□□□ -0.51
CAST-239ENST00000513666 VIL1P09327 827 aaKnown RBP11.85□□□□□ -0.51
CAST-239ENST00000513666 TCIRG1Q13488 830 aa11.85□□□□□ -0.51
CAST-239ENST00000513666 DOK7Q18PE1 504 aa11.85□□□□□ -0.51
CAST-239ENST00000513666 HABP4Q5JVS0 413 aaKnown RBP11.85□□□□□ -0.51
CAST-239ENST00000513666 EYA3Q99504 573 aa11.85□□□□□ -0.51
CAST-239ENST00000513666 ZNF609O15014 1411 aa11.84□□□□□ -0.51
CAST-239ENST00000513666 ANXA1P04083 346 aa11.84□□□□□ -0.51
CAST-239ENST00000513666 EIF2S2P20042 333 aaKnown RBP11.84□□□□□ -0.51
CAST-239ENST00000513666 GPSM2P81274 684 aa11.84□□□□□ -0.51
CAST-239ENST00000513666 ANGEL2Q5VTE6 544 aaKnown RBP11.84□□□□□ -0.51
CAST-239ENST00000513666 CELF1Q92879 486 aaKnown RBP11.84□□□□□ -0.51
CAST-239ENST00000513666 DCBLD2Q96PD2 775 aa11.84□□□□□ -0.51
CAST-239ENST00000513666 FBXO3Q9UK99 471 aa11.84□□□□□ -0.51
CAST-239ENST00000513666 GPR25O00155 361 aa11.83□□□□□ -0.52
CAST-239ENST00000513666 ZNF280AP59817 542 aaPredicted RBP11.83□□□□□ -0.52
CAST-239ENST00000513666 NFE2L2Q16236 605 aa11.83□□□□□ -0.52
CAST-239ENST00000513666 COPS6Q7L5N1 327 aa11.83□□□□□ -0.52
CAST-239ENST00000513666 ZBTB47Q9UFB7 747 aaPredicted RBP11.83□□□□□ -0.52
CAST-239ENST00000513666 COL4A1P02462 1669 aa11.82□□□□□ -0.52
CAST-239ENST00000513666 TM4SF4P48230 202 aa11.82□□□□□ -0.52
CAST-239ENST00000513666 SCARF1Q14162 830 aa11.82□□□□□ -0.52
CAST-239ENST00000513666 SF3B3Q15393 1217 aaKnown RBP11.82□□□□□ -0.52
CAST-239ENST00000513666 TBC1D16Q8TBP0 767 aa11.82□□□□□ -0.52
CAST-239ENST00000513666 XAGE3Q8WTP9 111 aa11.82□□□□□ -0.52
CAST-239ENST00000513666 PLEKHF1Q96S99 279 aa11.82□□□□□ -0.52
CAST-239ENST00000513666 PITPNM2Q9BZ72 1349 aa11.82□□□□□ -0.52
CAST-239ENST00000513666 PSME4Q14997 1843 aa11.82□□□□□ -0.52
CAST-239ENST00000513666 AIMP1Q12904 312 aaKnown RBP11.81□□□□□ -0.52
CAST-239ENST00000513666 MOB2Q70IA6 237 aa11.81□□□□□ -0.52
CAST-239ENST00000513666 RASEFQ8IZ41 740 aa11.81□□□□□ -0.52
CAST-239ENST00000513666 AGBL3Q8NEM8 1001 aa11.81□□□□□ -0.52
CAST-239ENST00000513666 ZC3H12CQ9C0D7 883 aaKnown RBP11.81□□□□□ -0.52
CAST-239ENST00000513666 TSPYL2Q9H2G4 693 aaPredicted RBP11.81□□□□□ -0.52
CAST-239ENST00000513666 TSPYL4Q9UJ04 414 aa11.81□□□□□ -0.52
CAST-239ENST00000513666 UBE2Q2LH0YL09 131 aa11.81□□□□□ -0.52
CAST-239ENST00000513666 FKTNO75072 461 aa11.81□□□□□ -0.52
CAST-239ENST00000513666 NECTIN2Q92692 538 aa11.81□□□□□ -0.52
CAST-239ENST00000513666 CFHR5Q9BXR6 569 aa11.81□□□□□ -0.52
CAST-239ENST00000513666 RSBN1LQ6PCB5 846 aaPredicted RBP11.8□□□□□ -0.52
CAST-239ENST00000513666 PODXL2Q9NZ53 605 aa11.8□□□□□ -0.52
CAST-239ENST00000513666 G3V3G9 751 aa11.79□□□□□ -0.52
CAST-239ENST00000513666 NUBP1P53384 320 aa11.79□□□□□ -0.52
CAST-239ENST00000513666 RPS8P62241 208 aaKnown RBP11.79□□□□□ -0.52
CAST-239ENST00000513666 SREBF2Q12772 1141 aa11.79□□□□□ -0.52
CAST-239ENST00000513666 DCAF8Q5TAQ9 597 aa11.79□□□□□ -0.52
CAST-239ENST00000513666 ZNF428Q96B54 188 aa11.79□□□□□ -0.52
CAST-239ENST00000513666 FAM89AQ96GI7 184 aa11.79□□□□□ -0.52
CAST-239ENST00000513666 GMLQ99445 158 aa11.79□□□□□ -0.52
CAST-239ENST00000513666 MYOZ2Q9NPC6 264 aa11.79□□□□□ -0.52
CAST-239ENST00000513666 BABAM1Q9NWV8 329 aa11.79□□□□□ -0.52
CAST-239ENST00000513666 RBBP6Q7Z6E9 1792 aaKnown RBP11.78□□□□□ -0.52
CAST-239ENST00000513666 UFL1O94874 794 aa11.78□□□□□ -0.52
CAST-239ENST00000513666 USP17L8P0C7I0 530 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms