RNA–Protein interactions for RNA: ENST00000513009.5

SDHC-208, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-208ENST00000513009 NUP98P52948 1817 aa10.95□□□□□ -0.66
SDHC-208ENST00000513009 RIC1Q4ADV7 1423 aa10.95□□□□□ -0.66
SDHC-208ENST00000513009 PPP2R1AP30153 589 aa10.95□□□□□ -0.66
SDHC-208ENST00000513009 JDP2Q8WYK2 163 aa10.95□□□□□ -0.66
SDHC-208ENST00000513009 DDX21Q9NR30 783 aaKnown RBP eCLIP10.95□□□□□ -0.66
SDHC-208ENST00000513009 COL4A5P29400 1685 aa10.95□□□□□ -0.66
SDHC-208ENST00000513009 U2AF1L5P0DN76 240 aaPredicted RBP10.94□□□□□ -0.66
SDHC-208ENST00000513009 U2AF1Q01081 240 aaKnown RBP eCLIP10.94□□□□□ -0.66
SDHC-208ENST00000513009 E2F4Q16254 413 aa10.94□□□□□ -0.66
SDHC-208ENST00000513009 GRIPAP1Q4V328 841 aa10.94□□□□□ -0.66
SDHC-208ENST00000513009 TSHZ2Q9NRE2 1034 aa10.94□□□□□ -0.66
SDHC-208ENST00000513009 ABT1Q9ULW3 272 aaKnown RBP10.94□□□□□ -0.66
SDHC-208ENST00000513009 VPS9D1Q9Y2B5 631 aa10.94□□□□□ -0.66
SDHC-208ENST00000513009 IBTKQ9P2D0 1353 aaPredicted RBP10.93□□□□□ -0.66
SDHC-208ENST00000513009 HTATSF1O43719 755 aaKnown RBP10.93□□□□□ -0.66
SDHC-208ENST00000513009 PTPREP23469 700 aa10.93□□□□□ -0.66
SDHC-208ENST00000513009 GTF2E1P29083 439 aaPredicted RBP10.93□□□□□ -0.66
SDHC-208ENST00000513009 LMOD1P29536 600 aaPredicted RBP10.93□□□□□ -0.66
SDHC-208ENST00000513009 HOXA10P31260 410 aaPredicted RBP10.93□□□□□ -0.66
SDHC-208ENST00000513009 ECE1P42892 770 aa10.93□□□□□ -0.66
SDHC-208ENST00000513009 EIF6P56537 245 aaKnown RBP10.93□□□□□ -0.66
SDHC-208ENST00000513009 HLFQ16534 295 aa10.93□□□□□ -0.66
SDHC-208ENST00000513009 RTF1Q92541 710 aaKnown RBP10.93□□□□□ -0.66
SDHC-208ENST00000513009 SLC4A5Q9BY07 1137 aa10.93□□□□□ -0.66
SDHC-208ENST00000513009 NYXQ9GZU5 481 aa10.93□□□□□ -0.66
SDHC-208ENST00000513009 ABCC12Q96J65 1359 aa10.92□□□□□ -0.66
SDHC-208ENST00000513009 FAM177BA6PVY3 158 aa10.92□□□□□ -0.66
SDHC-208ENST00000513009 ERVV-1B6SEH8 477 aa10.92□□□□□ -0.66
SDHC-208ENST00000513009 SCNN1DP51172 638 aa10.92□□□□□ -0.66
SDHC-208ENST00000513009 MCM10Q7L590 875 aa10.92□□□□□ -0.66
SDHC-208ENST00000513009 CAPNS2Q96L46 248 aa10.92□□□□□ -0.66
SDHC-208ENST00000513009 ARIH1Q9Y4X5 557 aaPredicted RBP10.92□□□□□ -0.66
SDHC-208ENST00000513009 KDM3BQ7LBC6 1761 aa10.92□□□□□ -0.66
SDHC-208ENST00000513009 RGS19P49795 217 aa10.91□□□□□ -0.66
SDHC-208ENST00000513009 TAF7Q15545 349 aaPredicted RBP10.91□□□□□ -0.66
SDHC-208ENST00000513009 FAM161AQ3B820 660 aa10.91□□□□□ -0.66
SDHC-208ENST00000513009 USP50Q70EL3 339 aaPredicted RBP10.91□□□□□ -0.66
SDHC-208ENST00000513009 ZBED2Q9BTP6 218 aa10.91□□□□□ -0.66
SDHC-208ENST00000513009 BEGAINQ9BUH8 593 aa10.91□□□□□ -0.66
SDHC-208ENST00000513009 GJA3Q9Y6H8 435 aa10.91□□□□□ -0.66
SDHC-208ENST00000513009 MAP3K15Q6ZN16 1313 aa10.9□□□□□ -0.66
SDHC-208ENST00000513009 DLG5Q8TDM6 1919 aa10.9□□□□□ -0.66
SDHC-208ENST00000513009 MAP2K2P36507 400 aa10.9□□□□□ -0.66
SDHC-208ENST00000513009 EPS15P42566 896 aa10.9□□□□□ -0.66
SDHC-208ENST00000513009 PDIA6Q15084 440 aa10.9□□□□□ -0.66
SDHC-208ENST00000513009 CST9Q5W186 159 aa10.9□□□□□ -0.66
SDHC-208ENST00000513009 TYW1BQ6NUM6 668 aa10.9□□□□□ -0.66
SDHC-208ENST00000513009 NUTM1Q86Y26 1132 aa10.9□□□□□ -0.66
SDHC-208ENST00000513009 LARGE2Q8N3Y3 721 aa10.9□□□□□ -0.66
SDHC-208ENST00000513009 RPGRQ92834 1020 aaKnown RBP10.9□□□□□ -0.66
SDHC-208ENST00000513009 GPR101Q96P66 508 aaPredicted RBP10.9□□□□□ -0.66
SDHC-208ENST00000513009 CRAMP1Q96RY5 1269 aa10.9□□□□□ -0.66
SDHC-208ENST00000513009 WDR70Q9NW82 654 aa10.9□□□□□ -0.66
SDHC-208ENST00000513009 TLL2Q9Y6L7 1015 aa10.9□□□□□ -0.66
SDHC-208ENST00000513009 MAPK8IP3Q9UPT6 1336 aa10.89□□□□□ -0.67
SDHC-208ENST00000513009 FMR1Q06787 632 aaKnown RBP eCLIP10.89□□□□□ -0.67
SDHC-208ENST00000513009 DCTN1Q14203 1278 aa10.89□□□□□ -0.67
SDHC-208ENST00000513009 WDR43Q15061 677 aaKnown RBP eCLIP10.89□□□□□ -0.67
SDHC-208ENST00000513009 CYP4F22Q6NT55 531 aa10.89□□□□□ -0.67
SDHC-208ENST00000513009 VPS33BQ9H267 617 aa10.89□□□□□ -0.67
SDHC-208ENST00000513009 UBN2Q6ZU65 1347 aa10.88□□□□□ -0.67
SDHC-208ENST00000513009 BHMG1C9JSJ3 638 aaPredicted RBP10.88□□□□□ -0.67
SDHC-208ENST00000513009 CA12O43570 354 aa10.88□□□□□ -0.67
SDHC-208ENST00000513009 MLLT1Q03111 559 aaPredicted RBP10.88□□□□□ -0.67
SDHC-208ENST00000513009 NIM1KQ8IY84 436 aa10.88□□□□□ -0.67
SDHC-208ENST00000513009 PNISRQ8TF01 805 aaKnown RBP10.88□□□□□ -0.67
SDHC-208ENST00000513009 FBXW7Q969H0 707 aa10.88□□□□□ -0.67
SDHC-208ENST00000513009 RBM17Q96I25 401 aaKnown RBP10.88□□□□□ -0.67
SDHC-208ENST00000513009 HHIPL1Q96JK4 782 aa10.88□□□□□ -0.67
SDHC-208ENST00000513009 ADARB2Q9NS39 739 aaKnown RBP10.88□□□□□ -0.67
SDHC-208ENST00000513009 GPRC5DQ9NZD1 345 aa10.88□□□□□ -0.67
SDHC-208ENST00000513009 MYBBP1AQ9BQG0 1328 aaKnown RBP10.87□□□□□ -0.67
SDHC-208ENST00000513009 TRAF5O00463 557 aa10.87□□□□□ -0.67
SDHC-208ENST00000513009 PPEF1O14829 653 aaPredicted RBP10.87□□□□□ -0.67
SDHC-208ENST00000513009 SUSD4Q5VX71 490 aa10.87□□□□□ -0.67
SDHC-208ENST00000513009 KIF6Q6ZMV9 814 aa10.87□□□□□ -0.67
SDHC-208ENST00000513009 SAPCD2Q86UD0 394 aa10.87□□□□□ -0.67
SDHC-208ENST00000513009 ZNF34Q8IZ26 560 aa10.87□□□□□ -0.67
SDHC-208ENST00000513009 EPAS1Q99814 870 aa10.87□□□□□ -0.67
SDHC-208ENST00000513009 ERBB4Q15303 1308 aa10.86□□□□□ -0.67
SDHC-208ENST00000513009 CDHR2Q9BYE9 1310 aa10.86□□□□□ -0.67
SDHC-208ENST00000513009 ANKRD36CQ5JPF3 1778 aa10.86□□□□□ -0.67
SDHC-208ENST00000513009 CCDC85CA6NKD9 419 aa10.86□□□□□ -0.67
SDHC-208ENST00000513009 SPDYE16A6NNV3 312 aaPredicted RBP10.86□□□□□ -0.67
SDHC-208ENST00000513009 PPIP5K2O43314 1243 aa10.86□□□□□ -0.67
SDHC-208ENST00000513009 ANP32CO43423 234 aa10.86□□□□□ -0.67
SDHC-208ENST00000513009 NTSR2O95665 410 aa10.86□□□□□ -0.67
SDHC-208ENST00000513009 COL9A1P20849 921 aa10.86□□□□□ -0.67
SDHC-208ENST00000513009 GPTP24298 496 aa10.86□□□□□ -0.67
SDHC-208ENST00000513009 EIF4A1P60842 406 aaKnown RBP10.86□□□□□ -0.67
SDHC-208ENST00000513009 GIGYF2Q6Y7W6 1299 aaKnown RBP10.86□□□□□ -0.67
SDHC-208ENST00000513009 TTLL7Q6ZT98 887 aa10.86□□□□□ -0.67
SDHC-208ENST00000513009 NGEFQ8N5V2 710 aa10.86□□□□□ -0.67
SDHC-208ENST00000513009 DDX12PQ92771 950 aa10.86□□□□□ -0.67
SDHC-208ENST00000513009 RTFDC1Q9BY42 306 aaPredicted RBP10.86□□□□□ -0.67
SDHC-208ENST00000513009 MIS18AQ9NYP9 233 aa10.86□□□□□ -0.67
SDHC-208ENST00000513009 PGAP2Q9UHJ9 254 aa10.86□□□□□ -0.67
SDHC-208ENST00000513009 ZNRF3Q9ULT6 936 aa10.86□□□□□ -0.67
SDHC-208ENST00000513009 ATP6V0A2Q9Y487 856 aa10.86□□□□□ -0.67
SDHC-208ENST00000513009 LAMB2P55268 1798 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms