RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 MARCH10Q8NA82 808 aaPredicted RBP9.63□□□□□ -0.87
RFC1-215ENST00000512881 CYLDQ9NQC7 956 aa9.63□□□□□ -0.87
RFC1-215ENST00000512881 CD163L1Q9NR16 1453 aa9.63□□□□□ -0.87
RFC1-215ENST00000512881 EXOC5O00471 708 aa9.62□□□□□ -0.87
RFC1-215ENST00000512881 PARD3Q8TEW0 1356 aa9.62□□□□□ -0.87
RFC1-215ENST00000512881 FIGNL2A6NMB9 653 aa9.61□□□□□ -0.87
RFC1-215ENST00000512881 LORP23490 312 aaPredicted RBP9.61□□□□□ -0.87
RFC1-215ENST00000512881 PTSQ03393 145 aa9.61□□□□□ -0.87
RFC1-215ENST00000512881 FOXD4L5Q5VV16 416 aaPredicted RBP9.61□□□□□ -0.87
RFC1-215ENST00000512881 RNF217Q8TC41 542 aa9.61□□□□□ -0.87
RFC1-215ENST00000512881 ZNF395Q9H8N7 513 aaPredicted RBP9.61□□□□□ -0.87
RFC1-215ENST00000512881 NLRP2Q9NX02 1062 aa9.61□□□□□ -0.87
RFC1-215ENST00000512881 TBC1D2BQ9UPU7 963 aa9.61□□□□□ -0.87
RFC1-215ENST00000512881 A0A1W2PP64 1363 aa9.61□□□□□ -0.87
RFC1-215ENST00000512881 PIK3C2AO00443 1686 aa9.61□□□□□ -0.87
RFC1-215ENST00000512881 EDC4Q6P2E9 1401 aaKnown RBP9.6□□□□□ -0.87
RFC1-215ENST00000512881 PLSCR1O15162 318 aa9.6□□□□□ -0.87
RFC1-215ENST00000512881 TMF1P82094 1093 aa9.6□□□□□ -0.87
RFC1-215ENST00000512881 PTF1AQ7RTS3 328 aa9.6□□□□□ -0.87
RFC1-215ENST00000512881 ANKRD24Q8TF21 1146 aa9.6□□□□□ -0.87
RFC1-215ENST00000512881 PCGF6Q9BYE7 350 aa9.6□□□□□ -0.87
RFC1-215ENST00000512881 POLMQ9NP87 494 aaPredicted RBP9.6□□□□□ -0.87
RFC1-215ENST00000512881 CCDC7Q96M83 1385 aa9.6□□□□□ -0.87
RFC1-215ENST00000512881 OVOS2A0A0G2JMS6 1433 aa9.59□□□□□ -0.87
RFC1-215ENST00000512881 OVOS2A0A0J9YW53 1432 aa9.59□□□□□ -0.87
RFC1-215ENST00000512881 OVOS2Q6IE36 1432 aa9.59□□□□□ -0.87
RFC1-215ENST00000512881 PTGIRP43119 386 aa9.59□□□□□ -0.87
RFC1-215ENST00000512881 ERVK-9P63128 1117 aa9.59□□□□□ -0.87
RFC1-215ENST00000512881 IP6K1Q92551 441 aa9.59□□□□□ -0.87
RFC1-215ENST00000512881 COG3Q96JB2 828 aa9.59□□□□□ -0.87
RFC1-215ENST00000512881 STK17AQ9UEE5 414 aa9.59□□□□□ -0.87
RFC1-215ENST00000512881 TIMELESSQ9UNS1 1208 aa9.59□□□□□ -0.87
RFC1-215ENST00000512881 NFAT5O94916 1531 aa9.59□□□□□ -0.87
RFC1-215ENST00000512881 NINLQ9Y2I6 1382 aa9.59□□□□□ -0.87
RFC1-215ENST00000512881 FBLN1P23142 703 aa9.58□□□□□ -0.88
RFC1-215ENST00000512881 MCCD1P59942 119 aaPredicted RBP9.58□□□□□ -0.88
RFC1-215ENST00000512881 COL18A1P39060 1754 aa9.58□□□□□ -0.88
RFC1-215ENST00000512881 RGPD1P0DJD0 1748 aa9.57□□□□□ -0.88
RFC1-215ENST00000512881 IL2RBP14784 551 aa9.57□□□□□ -0.88
RFC1-215ENST00000512881 CDCA8Q53HL2 280 aa9.57□□□□□ -0.88
RFC1-215ENST00000512881 ZNF592Q92610 1267 aa9.57□□□□□ -0.88
RFC1-215ENST00000512881 LTV1Q96GA3 475 aaPredicted RBP9.57□□□□□ -0.88
RFC1-215ENST00000512881 ZNF330Q9Y3S2 320 aaPredicted RBP9.57□□□□□ -0.88
RFC1-215ENST00000512881 USP47Q96K76 1375 aa9.57□□□□□ -0.88
RFC1-215ENST00000512881 BCL9O00512 1426 aa9.56□□□□□ -0.88
RFC1-215ENST00000512881 SLC35F4A4IF30 521 aa9.56□□□□□ -0.88
RFC1-215ENST00000512881 FYB1O15117 783 aa9.56□□□□□ -0.88
RFC1-215ENST00000512881 KCNQ2O43526 872 aa9.56□□□□□ -0.88
RFC1-215ENST00000512881 SCTRP47872 440 aa9.56□□□□□ -0.88
RFC1-215ENST00000512881 AMPHP49418 695 aa9.56□□□□□ -0.88
RFC1-215ENST00000512881 IRF5Q13568 498 aa9.56□□□□□ -0.88
RFC1-215ENST00000512881 RNF20Q5VTR2 975 aa9.56□□□□□ -0.88
RFC1-215ENST00000512881 CCDC155Q8N6L0 562 aa9.56□□□□□ -0.88
RFC1-215ENST00000512881 MAP3K19Q56UN5 1328 aa9.56□□□□□ -0.88
RFC1-215ENST00000512881 AKAP12Q02952 1782 aa9.55□□□□□ -0.88
RFC1-215ENST00000512881 ANKRD36BQ8N2N9 1353 aa9.55□□□□□ -0.88
RFC1-215ENST00000512881 SENP3-EIF4A1A0A087X0R7 540 aa9.55□□□□□ -0.88
RFC1-215ENST00000512881 HOXC9P31274 260 aa9.55□□□□□ -0.88
RFC1-215ENST00000512881 CC2D2BQ6DHV5 1058 aa9.55□□□□□ -0.88
RFC1-215ENST00000512881 GGNBP2Q9H3C7 697 aa9.55□□□□□ -0.88
RFC1-215ENST00000512881 CLSPNQ9HAW4 1339 aa9.55□□□□□ -0.88
RFC1-215ENST00000512881 PARP4Q9UKK3 1724 aaKnown RBP9.54□□□□□ -0.88
RFC1-215ENST00000512881 ATP5J2-PTCD1G3V325 749 aa9.54□□□□□ -0.88
RFC1-215ENST00000512881 MCM6Q14566 821 aa9.54□□□□□ -0.88
RFC1-215ENST00000512881 TXNRD1Q16881 649 aa9.54□□□□□ -0.88
RFC1-215ENST00000512881 ACSBG1Q96GR2 724 aa9.54□□□□□ -0.88
RFC1-215ENST00000512881 PCDHB11Q9Y5F2 797 aa9.54□□□□□ -0.88
RFC1-215ENST00000512881 ABCC6O95255 1503 aa9.54□□□□□ -0.88
RFC1-215ENST00000512881 TNS1Q9HBL0 1735 aaKnown RBP9.53□□□□□ -0.88
RFC1-215ENST00000512881 RRS1Q15050 365 aaKnown RBP9.53□□□□□ -0.88
RFC1-215ENST00000512881 ZSCAN1Q8NBB4 408 aa9.53□□□□□ -0.88
RFC1-215ENST00000512881 DDX54Q8TDD1 881 aaKnown RBP9.53□□□□□ -0.88
RFC1-215ENST00000512881 MON2Q7Z3U7 1717 aa9.53□□□□□ -0.88
RFC1-215ENST00000512881 TRAK2O60296 914 aa9.52□□□□□ -0.89
RFC1-215ENST00000512881 TNS2Q63HR2 1409 aa9.52□□□□□ -0.89
RFC1-215ENST00000512881 GPR161Q8N6U8 529 aaKnown RBP9.52□□□□□ -0.89
RFC1-215ENST00000512881 OSBPL3Q9H4L5 887 aa9.52□□□□□ -0.89
RFC1-215ENST00000512881 SPON1Q9HCB6 807 aa9.52□□□□□ -0.89
RFC1-215ENST00000512881 PEAK1Q9H792 1746 aa9.51□□□□□ -0.89
RFC1-215ENST00000512881 ITGA6P23229 1130 aa9.51□□□□□ -0.89
RFC1-215ENST00000512881 RNF144AP50876 292 aaPredicted RBP9.51□□□□□ -0.89
RFC1-215ENST00000512881 KRT76Q01546 638 aa9.51□□□□□ -0.89
RFC1-215ENST00000512881 NBPF6Q5VWK0 638 aa9.51□□□□□ -0.89
RFC1-215ENST00000512881 NANOS1Q8WY41 292 aaKnown RBP9.51□□□□□ -0.89
RFC1-215ENST00000512881 NBPF4Q96M43 638 aa9.51□□□□□ -0.89
RFC1-215ENST00000512881 CCDC85AQ96PX6 553 aaPredicted RBP9.51□□□□□ -0.89
RFC1-215ENST00000512881 STK32BQ9NY57 414 aa9.51□□□□□ -0.89
RFC1-215ENST00000512881 LRRC37A3O60309 1634 aa9.51□□□□□ -0.89
RFC1-215ENST00000512881 LRP5O75197 1615 aa9.5□□□□□ -0.89
RFC1-215ENST00000512881 SLC15A2Q16348 729 aa9.5□□□□□ -0.89
RFC1-215ENST00000512881 HSP90AB2PQ58FF8 381 aa9.5□□□□□ -0.89
RFC1-215ENST00000512881 LYSMD3Q7Z3D4 306 aa9.5□□□□□ -0.89
RFC1-215ENST00000512881 CYP2U1Q7Z449 544 aa9.5□□□□□ -0.89
RFC1-215ENST00000512881 ZCRB1Q8TBF4 217 aaKnown RBP9.5□□□□□ -0.89
RFC1-215ENST00000512881 PDGFDQ9GZP0 370 aaPredicted RBP9.5□□□□□ -0.89
RFC1-215ENST00000512881 GDPD2Q9HCC8 539 aa9.5□□□□□ -0.89
RFC1-215ENST00000512881 CEP126Q9P2H0 1117 aa9.5□□□□□ -0.89
RFC1-215ENST00000512881 PPP1R1BQ9UD71 204 aaPredicted RBP9.5□□□□□ -0.89
RFC1-215ENST00000512881 A0A1W2PRU2 124 aa9.49□□□□□ -0.89
RFC1-215ENST00000512881 ZBTB7AO95365 584 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms