RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 LAMB4A4D0S4 1761 aa13.62□□□□□ -0.23
SNX25-205ENST00000512853 RGPD5Q99666 1765 aa13.62□□□□□ -0.23
SNX25-205ENST00000512853 NEMFO60524 1076 aa13.61□□□□□ -0.23
SNX25-205ENST00000512853 AIMP1Q12904 312 aaKnown RBP13.61□□□□□ -0.23
SNX25-205ENST00000512853 STX1AQ16623 288 aa13.61□□□□□ -0.23
SNX25-205ENST00000512853 RABL6Q3YEC7 729 aaPredicted RBP13.61□□□□□ -0.23
SNX25-205ENST00000512853 ATL3Q6DD88 541 aa13.61□□□□□ -0.23
SNX25-205ENST00000512853 CACTINQ8WUQ7 758 aaKnown RBP13.61□□□□□ -0.23
SNX25-205ENST00000512853 HAUS7Q99871 368 aa13.61□□□□□ -0.23
SNX25-205ENST00000512853 RCOR1Q9UKL0 485 aa13.61□□□□□ -0.23
SNX25-205ENST00000512853 PAXBP1Q9Y5B6 917 aa13.61□□□□□ -0.23
SNX25-205ENST00000512853 PALLDQ8WX93 1383 aa13.61□□□□□ -0.23
SNX25-205ENST00000512853 ZNF142P52746 1687 aaPredicted RBP13.61□□□□□ -0.23
SNX25-205ENST00000512853 KDM6AO15550 1401 aaPredicted RBP13.61□□□□□ -0.23
SNX25-205ENST00000512853 H3BQV1 296 aa13.6□□□□□ -0.23
SNX25-205ENST00000512853 GCP02774 474 aa13.6□□□□□ -0.23
SNX25-205ENST00000512853 CYP21A2P08686 494 aa13.6□□□□□ -0.23
SNX25-205ENST00000512853 TNNT1P13805 278 aa13.6□□□□□ -0.23
SNX25-205ENST00000512853 CBX1P83916 185 aa13.6□□□□□ -0.23
SNX25-205ENST00000512853 PSME1Q06323 249 aa13.6□□□□□ -0.23
SNX25-205ENST00000512853 SCRN1Q12765 414 aa13.6□□□□□ -0.23
SNX25-205ENST00000512853 CCDC144BQ3MJ40 725 aa13.6□□□□□ -0.23
SNX25-205ENST00000512853 IFFO2Q5TF58 517 aa13.6□□□□□ -0.23
SNX25-205ENST00000512853 CCDC144CPQ8IYA2 1237 aa13.6□□□□□ -0.23
SNX25-205ENST00000512853 FEZ1Q99689 392 aa13.6□□□□□ -0.23
SNX25-205ENST00000512853 SPEF2Q9C093 1822 aa13.6□□□□□ -0.23
SNX25-205ENST00000512853 HMGB1P09429 215 aaKnown RBP13.6□□□□□ -0.23
SNX25-205ENST00000512853 HSP90B1P14625 803 aaKnown RBP13.6□□□□□ -0.23
SNX25-205ENST00000512853 RBM6P78332 1123 aaKnown RBP13.6□□□□□ -0.23
SNX25-205ENST00000512853 PTPN12Q05209 780 aaKnown RBP13.6□□□□□ -0.23
SNX25-205ENST00000512853 MCMDC2Q4G0Z9 681 aa13.6□□□□□ -0.23
SNX25-205ENST00000512853 C11orf57Q6ZUT1 292 aaPredicted RBP13.6□□□□□ -0.23
SNX25-205ENST00000512853 TICAM2Q86XR7 235 aa13.6□□□□□ -0.23
SNX25-205ENST00000512853 NSUN7Q8NE18 718 aaKnown RBP13.6□□□□□ -0.23
SNX25-205ENST00000512853 XAGE3Q8WTP9 111 aa13.6□□□□□ -0.23
SNX25-205ENST00000512853 C16orf45Q96MC5 204 aaPredicted RBP13.6□□□□□ -0.23
SNX25-205ENST00000512853 GLI3P10071 1580 aa13.6□□□□□ -0.23
SNX25-205ENST00000512853 TFCP2Q12800 502 aa13.59□□□□□ -0.23
SNX25-205ENST00000512853 ZNF790Q6PG37 636 aa13.59□□□□□ -0.23
SNX25-205ENST00000512853 STOX1Q6ZVD7 989 aa13.59□□□□□ -0.23
SNX25-205ENST00000512853 LRP10Q7Z4F1 713 aa13.59□□□□□ -0.23
SNX25-205ENST00000512853 MYD88Q99836 296 aa13.59□□□□□ -0.23
SNX25-205ENST00000512853 AGXT2Q9BYV1 514 aa13.59□□□□□ -0.23
SNX25-205ENST00000512853 MST1RQ04912 1400 aa13.59□□□□□ -0.23
SNX25-205ENST00000512853 SALL1Q9NSC2 1324 aa13.59□□□□□ -0.23
SNX25-205ENST00000512853 GOLGA6L19H0YKK7 550 aa13.58□□□□□ -0.23
SNX25-205ENST00000512853 CCDC129Q6ZRS4 1044 aa13.58□□□□□ -0.23
SNX25-205ENST00000512853 GOLPH3LQ9H4A5 285 aa13.58□□□□□ -0.23
SNX25-205ENST00000512853 CTDNEP1O95476 244 aa13.58□□□□□ -0.24
SNX25-205ENST00000512853 U2AF2P26368 475 aaKnown RBP eCLIP13.58□□□□□ -0.247e-6■□□□□ 11.2
SNX25-205ENST00000512853 ESCO1Q5FWF5 840 aa13.58□□□□□ -0.24
SNX25-205ENST00000512853 LRRC8AQ8IWT6 810 aa13.58□□□□□ -0.24
SNX25-205ENST00000512853 CCAR1Q8IX12 1150 aaKnown RBP13.58□□□□□ -0.24
SNX25-205ENST00000512853 KBTBD3Q8NAB2 608 aa13.58□□□□□ -0.24
SNX25-205ENST00000512853 ENGASEQ8NFI3 743 aa13.58□□□□□ -0.24
SNX25-205ENST00000512853 DDX11Q96FC9 970 aa13.58□□□□□ -0.24
SNX25-205ENST00000512853 ZNF396Q96N95 335 aaPredicted RBP13.58□□□□□ -0.24
SNX25-205ENST00000512853 SLC52A2Q9HAB3 445 aa13.58□□□□□ -0.24
SNX25-205ENST00000512853 KCND1Q9NSA2 647 aa13.58□□□□□ -0.24
SNX25-205ENST00000512853 DDX60Q8IY21 1712 aaKnown RBP13.58□□□□□ -0.24
SNX25-205ENST00000512853 PLEKHG2Q9H7P9 1386 aa13.57□□□□□ -0.24
SNX25-205ENST00000512853 PTPDC1A2A3K4 754 aa13.57□□□□□ -0.24
SNX25-205ENST00000512853 EXOSC10Q01780 885 aaKnown RBP13.57□□□□□ -0.24
SNX25-205ENST00000512853 TPD52L1Q16890 204 aaPredicted RBP13.57□□□□□ -0.24
SNX25-205ENST00000512853 CCDC73Q6ZRK6 1079 aa13.57□□□□□ -0.24
SNX25-205ENST00000512853 COPS6Q7L5N1 327 aa13.57□□□□□ -0.24
SNX25-205ENST00000512853 DHX32Q7L7V1 743 aaKnown RBP13.57□□□□□ -0.24
SNX25-205ENST00000512853 CCDC112Q8NEF3 446 aa13.57□□□□□ -0.24
SNX25-205ENST00000512853 DBNDD2Q9BQY9 259 aa13.57□□□□□ -0.24
SNX25-205ENST00000512853 DSCC1Q9BVC3 393 aa13.57□□□□□ -0.24
SNX25-205ENST00000512853 CGNQ9P2M7 1197 aaKnown RBP13.57□□□□□ -0.24
SNX25-205ENST00000512853 TJP1Q07157 1748 aa13.57□□□□□ -0.24
SNX25-205ENST00000512853 FAM160A1Q05DH4 1040 aa13.56□□□□□ -0.24
SNX25-205ENST00000512853 SNW1Q13573 536 aaKnown RBP13.56□□□□□ -0.24
SNX25-205ENST00000512853 NYAP1Q6ZVC0 841 aa13.56□□□□□ -0.24
SNX25-205ENST00000512853 SEC62Q99442 399 aaKnown RBP13.56□□□□□ -0.24
SNX25-205ENST00000512853 HELLSQ9NRZ9 838 aa13.56□□□□□ -0.24
SNX25-205ENST00000512853 ANO10Q9NW15 660 aa13.56□□□□□ -0.24
SNX25-205ENST00000512853 OGFRQ9NZT2 677 aa13.56□□□□□ -0.24
SNX25-205ENST00000512853 ALS2Q96Q42 1657 aa13.56□□□□□ -0.24
SNX25-205ENST00000512853 TMEM94Q12767 1356 aa13.56□□□□□ -0.24
SNX25-205ENST00000512853 PKD1L3Q7Z443 1732 aa13.56□□□□□ -0.24
SNX25-205ENST00000512853 PARP4Q9UKK3 1724 aaKnown RBP13.56□□□□□ -0.24
SNX25-205ENST00000512853 CEP135Q66GS9 1140 aa13.56□□□□□ -0.24
SNX25-205ENST00000512853 DHX40Q8IX18 779 aaKnown RBP13.56□□□□□ -0.24
SNX25-205ENST00000512853 USP28Q96RU2 1077 aa13.56□□□□□ -0.24
SNX25-205ENST00000512853 DNAJC2Q99543 621 aaKnown RBP13.56□□□□□ -0.24
SNX25-205ENST00000512853 CTNNA3Q9UI47 895 aa13.56□□□□□ -0.24
SNX25-205ENST00000512853 NUP188Q5SRE5 1749 aa13.56□□□□□ -0.24
SNX25-205ENST00000512853 KINO60870 393 aaKnown RBP13.55□□□□□ -0.24
SNX25-205ENST00000512853 MYL6BP14649 208 aa13.55□□□□□ -0.24
SNX25-205ENST00000512853 CASP7P55210 303 aa13.55□□□□□ -0.24
SNX25-205ENST00000512853 CCZ1BP86790 482 aa13.55□□□□□ -0.24
SNX25-205ENST00000512853 CCZ1P86791 482 aaPredicted RBP13.55□□□□□ -0.24
SNX25-205ENST00000512853 ERBB3P21860 1342 aa13.55□□□□□ -0.24
SNX25-205ENST00000512853 SPDYE4A6NLX3 237 aa13.54□□□□□ -0.24
SNX25-205ENST00000512853 CHGBP05060 677 aa13.54□□□□□ -0.24
SNX25-205ENST00000512853 SLC39A6Q13433 755 aa13.54□□□□□ -0.24
SNX25-205ENST00000512853 ANKRD13DQ6ZTN6 518 aa13.54□□□□□ -0.24
SNX25-205ENST00000512853 DDX46Q7L014 1031 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms