RNA–Protein interactions for RNA: ENST00000510783.5

RFC1-212, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 723 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-212ENST00000510783 FMR1NBQ8N0W7 255 aaPredicted RBP9.65□□□□□ -0.86
RFC1-212ENST00000510783 ABTB2Q8N961 1025 aa9.65□□□□□ -0.86
RFC1-212ENST00000510783 TTC9Q92623 222 aa9.65□□□□□ -0.86
RFC1-212ENST00000510783 SOX18P35713 384 aa9.64□□□□□ -0.87
RFC1-212ENST00000510783 WFDC8Q8IUA0 241 aa9.64□□□□□ -0.87
RFC1-212ENST00000510783 PLD4Q96BZ4 506 aa9.64□□□□□ -0.87
RFC1-212ENST00000510783 TPSG1Q9NRR2 321 aa9.64□□□□□ -0.87
RFC1-212ENST00000510783 SMARCA2P51531 1590 aa9.63□□□□□ -0.87
RFC1-212ENST00000510783 TMEM88BA6NKF7 163 aa9.63□□□□□ -0.87
RFC1-212ENST00000510783 GHRHP01286 108 aa9.63□□□□□ -0.87
RFC1-212ENST00000510783 ATAD2BQ9ULI0 1458 aa9.63□□□□□ -0.87
RFC1-212ENST00000510783 PPP1R15AO75807 674 aaPredicted RBP9.62□□□□□ -0.87
RFC1-212ENST00000510783 ADGRE1Q14246 886 aa9.62□□□□□ -0.87
RFC1-212ENST00000510783 ATCAYQ86WG3 371 aa9.62□□□□□ -0.87
RFC1-212ENST00000510783 LENG1Q96BZ8 264 aaPredicted RBP9.62□□□□□ -0.87
RFC1-212ENST00000510783 SEMA6BQ9H3T3 888 aa9.62□□□□□ -0.87
RFC1-212ENST00000510783 FNDC3AQ9Y2H6 1198 aaKnown RBP9.62□□□□□ -0.87
RFC1-212ENST00000510783 HMGXB3Q12766 1538 aa9.61□□□□□ -0.87
RFC1-212ENST00000510783 HOXD8P13378 290 aaPredicted RBP9.61□□□□□ -0.87
RFC1-212ENST00000510783 MBTPS1Q14703 1052 aa9.61□□□□□ -0.87
RFC1-212ENST00000510783 DTWD1Q8N5C7 304 aa9.61□□□□□ -0.87
RFC1-212ENST00000510783 RSPO4Q2I0M5 234 aaPredicted RBP9.6□□□□□ -0.87
RFC1-212ENST00000510783 GDF6Q6KF10 455 aaPredicted RBP9.6□□□□□ -0.87
RFC1-212ENST00000510783 FBXO11Q86XK2 927 aa9.6□□□□□ -0.87
RFC1-212ENST00000510783 OR13H1Q8NG92 308 aa9.6□□□□□ -0.87
RFC1-212ENST00000510783 HELQQ8TDG4 1101 aa9.6□□□□□ -0.87
RFC1-212ENST00000510783 RBSNQ9H1K0 784 aa9.6□□□□□ -0.87
RFC1-212ENST00000510783 USP21Q9UK80 565 aa9.6□□□□□ -0.87
RFC1-212ENST00000510783 CARNS1A5YM72 827 aa9.59□□□□□ -0.87
RFC1-212ENST00000510783 ITGB7P26010 798 aa9.59□□□□□ -0.87
RFC1-212ENST00000510783 SSFA2P28290 1259 aa9.59□□□□□ -0.87
RFC1-212ENST00000510783 NRG1Q02297 640 aaPredicted RBP9.59□□□□□ -0.87
RFC1-212ENST00000510783 COL13A1Q5TAT6 717 aaPredicted RBP9.59□□□□□ -0.87
RFC1-212ENST00000510783 TTC39BQ5VTQ0 682 aaPredicted RBP9.59□□□□□ -0.87
RFC1-212ENST00000510783 NUDT16Q96DE0 195 aaKnown RBP9.59□□□□□ -0.87
RFC1-212ENST00000510783 NESP48681 1621 aa9.58□□□□□ -0.88
RFC1-212ENST00000510783 NKAPLQ5M9Q1 402 aa9.58□□□□□ -0.88
RFC1-212ENST00000510783 TXNRD3Q86VQ6 643 aa9.58□□□□□ -0.88
RFC1-212ENST00000510783 SMARCA4P51532 1647 aa9.57□□□□□ -0.88
RFC1-212ENST00000510783 DEAF1O75398 565 aaPredicted RBP9.57□□□□□ -0.88
RFC1-212ENST00000510783 IL22RA1Q8N6P7 574 aa9.57□□□□□ -0.88
RFC1-212ENST00000510783 GTF3C2Q8WUA4 911 aaPredicted RBP9.57□□□□□ -0.88
RFC1-212ENST00000510783 ABI2Q9NYB9 513 aaPredicted RBP9.57□□□□□ -0.88
RFC1-212ENST00000510783 TRIM33Q9UPN9 1127 aa9.57□□□□□ -0.88
RFC1-212ENST00000510783 BAZ1BQ9UIG0 1483 aaKnown RBP9.57□□□□□ -0.88
RFC1-212ENST00000510783 CYP2E1P05181 493 aaPredicted RBP9.56□□□□□ -0.88
RFC1-212ENST00000510783 HYAL2Q12891 473 aa9.56□□□□□ -0.88
RFC1-212ENST00000510783 EDEM1Q92611 657 aa9.56□□□□□ -0.88
RFC1-212ENST00000510783 MPSTP25325 297 aa9.55□□□□□ -0.88
RFC1-212ENST00000510783 DNM1Q05193 864 aaKnown RBP9.55□□□□□ -0.88
RFC1-212ENST00000510783 MTMR3Q13615 1198 aa9.55□□□□□ -0.88
RFC1-212ENST00000510783 NOM1Q5C9Z4 860 aaKnown RBP9.55□□□□□ -0.88
RFC1-212ENST00000510783 SPACA7Q96KW9 195 aa9.55□□□□□ -0.88
RFC1-212ENST00000510783 ELP3Q9H9T3 547 aa9.55□□□□□ -0.88
RFC1-212ENST00000510783 TMEM63CQ9P1W3 806 aa9.55□□□□□ -0.88
RFC1-212ENST00000510783 ATP11AP98196 1134 aa9.54□□□□□ -0.88
RFC1-212ENST00000510783 PDE12Q6L8Q7 609 aaKnown RBP9.54□□□□□ -0.88
RFC1-212ENST00000510783 IGF2-ASQ6U949 168 aa9.54□□□□□ -0.88
RFC1-212ENST00000510783 ZNF438Q7Z4V0 828 aa9.54□□□□□ -0.88
RFC1-212ENST00000510783 EIF1AXP47813 144 aaKnown RBP9.53□□□□□ -0.88
RFC1-212ENST00000510783 CEP135Q66GS9 1140 aa9.53□□□□□ -0.88
RFC1-212ENST00000510783 THOC2Q8NI27 1593 aaKnown RBP9.53□□□□□ -0.88
RFC1-212ENST00000510783 LAMC3Q9Y6N6 1575 aa9.53□□□□□ -0.88
RFC1-212ENST00000510783 A6NHS1 94 aa9.52□□□□□ -0.89
RFC1-212ENST00000510783 DLL1O00548 723 aa9.52□□□□□ -0.89
RFC1-212ENST00000510783 DYRK3O43781 588 aa9.52□□□□□ -0.89
RFC1-212ENST00000510783 KIF4AO95239 1232 aa9.52□□□□□ -0.89
RFC1-212ENST00000510783 IREB2P48200 963 aaKnown RBP9.52□□□□□ -0.89
RFC1-212ENST00000510783 PHLDB3Q6NSJ2 640 aa9.52□□□□□ -0.89
RFC1-212ENST00000510783 WFDC12Q8WWY7 111 aa9.52□□□□□ -0.89
RFC1-212ENST00000510783 RASSF4Q9H2L5 321 aa9.52□□□□□ -0.89
RFC1-212ENST00000510783 GGNBP2Q9H3C7 697 aa9.52□□□□□ -0.89
RFC1-212ENST00000510783 BAZ1AQ9NRL2 1556 aaPredicted RBP9.52□□□□□ -0.89
RFC1-212ENST00000510783 CNTN3Q9P232 1028 aa9.52□□□□□ -0.89
RFC1-212ENST00000510783 PDS5BQ9NTI5 1447 aa9.51□□□□□ -0.89
RFC1-212ENST00000510783 PDGFAP04085 211 aa9.51□□□□□ -0.89
RFC1-212ENST00000510783 RPLP1P05386 114 aaKnown RBP9.51□□□□□ -0.89
RFC1-212ENST00000510783 C8orf34Q49A92 452 aa9.51□□□□□ -0.89
RFC1-212ENST00000510783 NCAPG2Q86XI2 1143 aa9.51□□□□□ -0.89
RFC1-212ENST00000510783 TP53INP1Q96A56 240 aa9.51□□□□□ -0.89
RFC1-212ENST00000510783 LACRTQ9GZZ8 138 aa9.51□□□□□ -0.89
RFC1-212ENST00000510783 KANSL3Q9P2N6 904 aa9.51□□□□□ -0.89
RFC1-212ENST00000510783 SMNDC1O75940 238 aaKnown RBP eCLIP9.5□□□□□ -0.89
RFC1-212ENST00000510783 PCSK2P16519 638 aa9.5□□□□□ -0.89
RFC1-212ENST00000510783 MZF1P28698 734 aaPredicted RBP9.5□□□□□ -0.89
RFC1-212ENST00000510783 NOS3P29474 1203 aa9.5□□□□□ -0.89
RFC1-212ENST00000510783 SETDB1Q15047 1291 aa9.5□□□□□ -0.89
RFC1-212ENST00000510783 SSBP4Q9BWG4 385 aaPredicted RBP9.5□□□□□ -0.89
RFC1-212ENST00000510783 PPME1Q9Y570 386 aa9.5□□□□□ -0.89
RFC1-212ENST00000510783 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.5□□□□□ -0.89
RFC1-212ENST00000510783 XKR5Q6UX68 686 aa9.49□□□□□ -0.89
RFC1-212ENST00000510783 ADAMTSL4Q6UY14 1074 aa9.49□□□□□ -0.89
RFC1-212ENST00000510783 CACTIN-AS1Q8N1I8 211 aa9.49□□□□□ -0.89
RFC1-212ENST00000510783 CEP120Q8N960 986 aa9.49□□□□□ -0.89
RFC1-212ENST00000510783 C1orf127Q8N9H9 656 aa9.49□□□□□ -0.89
RFC1-212ENST00000510783 TTC16Q8NEE8 873 aa9.49□□□□□ -0.89
RFC1-212ENST00000510783 LINC01387J3KSC0 135 aa9.48□□□□□ -0.89
RFC1-212ENST00000510783 AAMPQ13685 434 aa9.48□□□□□ -0.89
RFC1-212ENST00000510783 ALKBH2Q6NS38 261 aa9.48□□□□□ -0.89
RFC1-212ENST00000510783 TXNDC11Q6PKC3 985 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms