RNA–Protein interactions for RNA: ENST00000509978.1

SPOCK1-207, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-207ENST00000509978 GSX2Q9BZM3 304 aa12.1□□□□□ -0.47
SPOCK1-207ENST00000509978 EHD4Q9H223 541 aa12.1□□□□□ -0.47
SPOCK1-207ENST00000509978 EFSO43281 561 aa12.09□□□□□ -0.47
SPOCK1-207ENST00000509978 ZFYVE1Q9HBF4 777 aa12.09□□□□□ -0.47
SPOCK1-207ENST00000509978 GPAMQ9HCL2 828 aa12.09□□□□□ -0.47
SPOCK1-207ENST00000509978 KBTBD4Q9NVX7 518 aa12.09□□□□□ -0.47
SPOCK1-207ENST00000509978 FIGNL2A6NMB9 653 aa12.08□□□□□ -0.48
SPOCK1-207ENST00000509978 SASH3O75995 380 aa12.08□□□□□ -0.48
SPOCK1-207ENST00000509978 RLBP1P12271 317 aa12.08□□□□□ -0.48
SPOCK1-207ENST00000509978 LAMC2Q13753 1193 aa12.08□□□□□ -0.48
SPOCK1-207ENST00000509978 CCDC144BQ3MJ40 725 aa12.08□□□□□ -0.48
SPOCK1-207ENST00000509978 SEC16BQ96JE7 1060 aa12.08□□□□□ -0.48
SPOCK1-207ENST00000509978 TTF2Q9UNY4 1162 aaKnown RBP12.08□□□□□ -0.48
SPOCK1-207ENST00000509978 CYP2E1P05181 493 aaPredicted RBP12.07□□□□□ -0.48
SPOCK1-207ENST00000509978 MAP3K10Q02779 954 aa12.07□□□□□ -0.48
SPOCK1-207ENST00000509978 PHF20L1A8MW92 1017 aa12.06□□□□□ -0.48
SPOCK1-207ENST00000509978 MMP20O60882 483 aa12.06□□□□□ -0.48
SPOCK1-207ENST00000509978 HOXD8P13378 290 aaPredicted RBP12.06□□□□□ -0.48
SPOCK1-207ENST00000509978 SOX18P35713 384 aa12.06□□□□□ -0.48
SPOCK1-207ENST00000509978 SMCPP49901 116 aaPredicted RBP12.06□□□□□ -0.48
SPOCK1-207ENST00000509978 CTC1Q2NKJ3 1217 aa12.06□□□□□ -0.48
SPOCK1-207ENST00000509978 RELL1Q8IUW5 271 aa12.06□□□□□ -0.48
SPOCK1-207ENST00000509978 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.06□□□□□ -0.48
SPOCK1-207ENST00000509978 PCDHGC4Q9Y5F7 938 aa12.06□□□□□ -0.48
SPOCK1-207ENST00000509978 TMEM238LA0A1B0GVL6 79 aa12.05□□□□□ -0.48
SPOCK1-207ENST00000509978 STK10O94804 968 aaKnown RBP12.05□□□□□ -0.48
SPOCK1-207ENST00000509978 TARSP26639 723 aaKnown RBP12.05□□□□□ -0.48
SPOCK1-207ENST00000509978 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.05□□□□□ -0.48
SPOCK1-207ENST00000509978 SV2BQ7L1I2 683 aa12.05□□□□□ -0.48
SPOCK1-207ENST00000509978 TRIM46Q7Z4K8 759 aa12.05□□□□□ -0.48
SPOCK1-207ENST00000509978 SPON2Q9BUD6 331 aa12.05□□□□□ -0.48
SPOCK1-207ENST00000509978 LATS2Q9NRM7 1088 aa12.05□□□□□ -0.48
SPOCK1-207ENST00000509978 ATXN7O15265 892 aaPredicted RBP12.04□□□□□ -0.48
SPOCK1-207ENST00000509978 KIF4AO95239 1232 aa12.04□□□□□ -0.48
SPOCK1-207ENST00000509978 FCGRTP55899 365 aa12.04□□□□□ -0.48
SPOCK1-207ENST00000509978 SFSWAPQ12872 951 aaKnown RBP12.04□□□□□ -0.48
SPOCK1-207ENST00000509978 CCDC85BQ15834 202 aaPredicted RBP12.04□□□□□ -0.48
SPOCK1-207ENST00000509978 KIAA0825Q8IV33 1275 aa12.04□□□□□ -0.48
SPOCK1-207ENST00000509978 TMEM74Q96NL1 305 aa12.04□□□□□ -0.48
SPOCK1-207ENST00000509978 TCF12Q99081 682 aa12.04□□□□□ -0.48
SPOCK1-207ENST00000509978 GAS2L1Q99501 681 aaPredicted RBP12.04□□□□□ -0.48
SPOCK1-207ENST00000509978 ABCB6Q9NP58 842 aa12.04□□□□□ -0.48
SPOCK1-207ENST00000509978 KCNQ5Q9NR82 932 aa12.04□□□□□ -0.48
SPOCK1-207ENST00000509978 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.04□□□□□ -0.48
SPOCK1-207ENST00000509978 MAP3K6O95382 1288 aa12.03□□□□□ -0.48
SPOCK1-207ENST00000509978 CCNJLQ8IV13 435 aa12.03□□□□□ -0.48
SPOCK1-207ENST00000509978 OXCT2Q9BYC2 517 aaPredicted RBP12.03□□□□□ -0.48
SPOCK1-207ENST00000509978 LIN7BQ9HAP6 207 aa12.03□□□□□ -0.48
SPOCK1-207ENST00000509978 ZFATQ9P243 1243 aa12.03□□□□□ -0.48
SPOCK1-207ENST00000509978 KANSL3Q9P2N6 904 aa12.03□□□□□ -0.48
SPOCK1-207ENST00000509978 ADAMTS1Q9UHI8 967 aa12.03□□□□□ -0.48
SPOCK1-207ENST00000509978 DNMT3LQ9UJW3 386 aa12.03□□□□□ -0.48
SPOCK1-207ENST00000509978 SENP3-EIF4A1A0A087X0R7 540 aa12.02□□□□□ -0.49
SPOCK1-207ENST00000509978 TLDC2A0PJX2 215 aa12.02□□□□□ -0.49
SPOCK1-207ENST00000509978 TLR7Q9NYK1 1049 aaKnown RBP12.02□□□□□ -0.49
SPOCK1-207ENST00000509978 TMA7Q9Y2S6 64 aaKnown RBP12.02□□□□□ -0.49
SPOCK1-207ENST00000509978 RARAP10276 462 aa12.01□□□□□ -0.49
SPOCK1-207ENST00000509978 EIF4A3P38919 411 aaKnown RBP12.01□□□□□ -0.49
SPOCK1-207ENST00000509978 TNP2Q05952 138 aa12.01□□□□□ -0.49
SPOCK1-207ENST00000509978 UBAP2LQ14157 1087 aaKnown RBP12.01□□□□□ -0.49
SPOCK1-207ENST00000509978 NBPF6Q5VWK0 638 aa12.01□□□□□ -0.49
SPOCK1-207ENST00000509978 DTHD1Q6ZMT9 781 aa12.01□□□□□ -0.49
SPOCK1-207ENST00000509978 NBPF4Q96M43 638 aa12.01□□□□□ -0.49
SPOCK1-207ENST00000509978 ZFP42Q96MM3 310 aa12.01□□□□□ -0.49
SPOCK1-207ENST00000509978 PSAPP07602 524 aa12□□□□□ -0.49
SPOCK1-207ENST00000509978 BMP1P13497 986 aa12□□□□□ -0.49
SPOCK1-207ENST00000509978 HYAL2Q12891 473 aa12□□□□□ -0.49
SPOCK1-207ENST00000509978 PMFBP1Q8TBY8 1022 aa12□□□□□ -0.49
SPOCK1-207ENST00000509978 CEP44Q9C0F1 390 aa12□□□□□ -0.49
SPOCK1-207ENST00000509978 OSBPL2Q9H1P3 480 aa12□□□□□ -0.49
SPOCK1-207ENST00000509978 PDZRN3Q9UPQ7 1066 aa12□□□□□ -0.49
SPOCK1-207ENST00000509978 THBS1P07996 1170 aa11.99□□□□□ -0.49
SPOCK1-207ENST00000509978 GBP2P32456 591 aaPredicted RBP11.99□□□□□ -0.49
SPOCK1-207ENST00000509978 COL9A2Q14055 689 aaPredicted RBP11.99□□□□□ -0.49
SPOCK1-207ENST00000509978 KRT25Q7Z3Z0 450 aa11.99□□□□□ -0.49
SPOCK1-207ENST00000509978 NT5C1AQ9BXI3 368 aa11.99□□□□□ -0.49
SPOCK1-207ENST00000509978 AKAP2Q9Y2D5 859 aa11.99□□□□□ -0.49
SPOCK1-207ENST00000509978 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.99□□□□□ -0.49
SPOCK1-207ENST00000509978 NCLP19338 710 aaKnown RBP11.98□□□□□ -0.49
SPOCK1-207ENST00000509978 NCAPG2Q86XI2 1143 aa11.98□□□□□ -0.49
SPOCK1-207ENST00000509978 CEP120Q8N960 986 aa11.98□□□□□ -0.49
SPOCK1-207ENST00000509978 RHOVQ96L33 236 aa11.98□□□□□ -0.49
SPOCK1-207ENST00000509978 CNTNAP3BQ96NU0 1288 aa11.98□□□□□ -0.49
SPOCK1-207ENST00000509978 PNMA5Q96PV4 448 aa11.98□□□□□ -0.49
SPOCK1-207ENST00000509978 OSMRQ99650 979 aa11.98□□□□□ -0.49
SPOCK1-207ENST00000509978 ZKSCAN3Q9BRR0 538 aa11.98□□□□□ -0.49
SPOCK1-207ENST00000509978 CNTNAP3Q9BZ76 1288 aa11.98□□□□□ -0.49
SPOCK1-207ENST00000509978 ZSWIM4Q9H7M6 989 aa11.98□□□□□ -0.49
SPOCK1-207ENST00000509978 NDFIP2Q9NV92 336 aa11.98□□□□□ -0.49
SPOCK1-207ENST00000509978 H7C1W4 665 aa11.97□□□□□ -0.49
SPOCK1-207ENST00000509978 KHNYNO15037 678 aaKnown RBP11.97□□□□□ -0.49
SPOCK1-207ENST00000509978 MAPTP10636 758 aaKnown RBP11.97□□□□□ -0.49
SPOCK1-207ENST00000509978 ITPKAP23677 461 aa11.97□□□□□ -0.49
SPOCK1-207ENST00000509978 PLAURQ03405 335 aa11.97□□□□□ -0.49
SPOCK1-207ENST00000509978 ZNF296Q8WUU4 475 aaPredicted RBP11.97□□□□□ -0.49
SPOCK1-207ENST00000509978 EAF1Q96JC9 268 aaPredicted RBP11.97□□□□□ -0.49
SPOCK1-207ENST00000509978 TRIM56Q9BRZ2 755 aaKnown RBP11.97□□□□□ -0.49
SPOCK1-207ENST00000509978 PIF1Q9H611 641 aa11.97□□□□□ -0.49
SPOCK1-207ENST00000509978 MARK1Q9P0L2 795 aa11.97□□□□□ -0.49
SPOCK1-207ENST00000509978 STRIP2Q9ULQ0 834 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms