RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 AGBL3Q8NEM8 1001 aa18.18■□□□□ 0.5
HMGCR-208ENST00000509431 ZNF333Q96JL9 665 aa18.18■□□□□ 0.5
HMGCR-208ENST00000509431 EFCC1Q9HA90 598 aa18.18■□□□□ 0.5
HMGCR-208ENST00000509431 KDM3BQ7LBC6 1761 aa18.17■□□□□ 0.5
HMGCR-208ENST00000509431 MANSC4A6NHS7 340 aaPredicted RBP18.17■□□□□ 0.5
HMGCR-208ENST00000509431 RIMBP2O15034 1052 aa18.17■□□□□ 0.5
HMGCR-208ENST00000509431 NSFL1CQ9UNZ2 370 aaKnown RBP18.17■□□□□ 0.5
HMGCR-208ENST00000509431 RRP7AQ9Y3A4 280 aaKnown RBP18.17■□□□□ 0.5
HMGCR-208ENST00000509431 SCN9AQ15858 1988 aa18.17■□□□□ 0.5
HMGCR-208ENST00000509431 BRCA2P51587 3418 aa18.16■□□□□ 0.5
HMGCR-208ENST00000509431 C6orf229H3BNL8 230 aa18.16■□□□□ 0.5
HMGCR-208ENST00000509431 SLC4A8Q2Y0W8 1093 aa18.16■□□□□ 0.5
HMGCR-208ENST00000509431 SPRYD7Q5W111 196 aa18.16■□□□□ 0.5
HMGCR-208ENST00000509431 ARMC9Q7Z3E5 817 aa18.16■□□□□ 0.5
HMGCR-208ENST00000509431 IFNL1Q8IU54 200 aa18.16■□□□□ 0.5
HMGCR-208ENST00000509431 KCNQ5Q9NR82 932 aa18.16■□□□□ 0.5
HMGCR-208ENST00000509431 TAF1P21675 1872 aa18.16■□□□□ 0.5
HMGCR-208ENST00000509431 DOK7Q18PE1 504 aa18.15■□□□□ 0.5
HMGCR-208ENST00000509431 COL6A3P12111 3177 aa18.15■□□□□ 0.5
HMGCR-208ENST00000509431 COL3A1P02461 1466 aaPredicted RBP18.14■□□□□ 0.5
HMGCR-208ENST00000509431 MCM10Q7L590 875 aa18.14■□□□□ 0.49
HMGCR-208ENST00000509431 CD99L2Q8TCZ2 262 aa18.14■□□□□ 0.49
HMGCR-208ENST00000509431 PHACTR3Q96KR7 559 aa18.14■□□□□ 0.49
HMGCR-208ENST00000509431 MYOZ2Q9NPC6 264 aa18.14■□□□□ 0.49
HMGCR-208ENST00000509431 POLLQ9UGP5 575 aa18.14■□□□□ 0.49
HMGCR-208ENST00000509431 LAMB1P07942 1786 aa18.13■□□□□ 0.49
HMGCR-208ENST00000509431 A0A1W2PPC1 479 aa18.13■□□□□ 0.49
HMGCR-208ENST00000509431 MYL6BP14649 208 aa18.13■□□□□ 0.49
HMGCR-208ENST00000509431 PTPN12Q05209 780 aaKnown RBP18.13■□□□□ 0.49
HMGCR-208ENST00000509431 ARHGEF6Q15052 776 aa18.13■□□□□ 0.49
HMGCR-208ENST00000509431 TAF7Q15545 349 aaPredicted RBP18.13■□□□□ 0.49
HMGCR-208ENST00000509431 RSBN1LQ6PCB5 846 aaPredicted RBP18.13■□□□□ 0.49
HMGCR-208ENST00000509431 PSME4Q14997 1843 aa18.13■□□□□ 0.49
HMGCR-208ENST00000509431 ERBB4Q15303 1308 aa18.13■□□□□ 0.49
HMGCR-208ENST00000509431 G3V3G9 751 aa18.12■□□□□ 0.49
HMGCR-208ENST00000509431 HTATSF1O43719 755 aaKnown RBP18.12■□□□□ 0.49
HMGCR-208ENST00000509431 USP17L8P0C7I0 530 aa18.12■□□□□ 0.49
HMGCR-208ENST00000509431 HCLS1P14317 486 aaPredicted RBP18.12■□□□□ 0.49
HMGCR-208ENST00000509431 SLC9C1Q4G0N8 1177 aa18.12■□□□□ 0.49
HMGCR-208ENST00000509431 DCAF8Q5TAQ9 597 aa18.12■□□□□ 0.49
HMGCR-208ENST00000509431 OTUD7BQ6GQQ9 843 aa18.12■□□□□ 0.49
HMGCR-208ENST00000509431 ZC3H12CQ9C0D7 883 aaKnown RBP18.12■□□□□ 0.49
HMGCR-208ENST00000509431 PRO3102Q9H379 93 aa18.12■□□□□ 0.49
HMGCR-208ENST00000509431 PRKAR2BP31323 418 aa18.11■□□□□ 0.49
HMGCR-208ENST00000509431 SP3Q02447 781 aa18.11■□□□□ 0.49
HMGCR-208ENST00000509431 ZBTB48P10074 688 aaPredicted RBP18.1■□□□□ 0.49
HMGCR-208ENST00000509431 HSP90AB3PQ58FF7 597 aa18.1■□□□□ 0.49
HMGCR-208ENST00000509431 LDLRAD1Q5T700 205 aa18.1■□□□□ 0.49
HMGCR-208ENST00000509431 PRAMEF18Q5VWM3 479 aa18.1■□□□□ 0.49
HMGCR-208ENST00000509431 PNISRQ8TF01 805 aaKnown RBP18.1■□□□□ 0.49
HMGCR-208ENST00000509431 DPF3Q92784 378 aa18.1■□□□□ 0.49
HMGCR-208ENST00000509431 SH3TC1Q8TE82 1336 aa18.09■□□□□ 0.49
HMGCR-208ENST00000509431 GPSM2P81274 684 aa18.09■□□□□ 0.49
HMGCR-208ENST00000509431 GMLQ99445 158 aa18.09■□□□□ 0.49
HMGCR-208ENST00000509431 RSPH6AQ9H0K4 717 aa18.09■□□□□ 0.49
HMGCR-208ENST00000509431 RANBP2P49792 3224 aaKnown RBP18.08■□□□□ 0.49
HMGCR-208ENST00000509431 TBC1D16Q8TBP0 767 aa18.08■□□□□ 0.48
HMGCR-208ENST00000509431 IGF2BP3O00425 579 aaKnown RBP eCLIP18.07■□□□□ 0.48
HMGCR-208ENST00000509431 CRHR2Q13324 411 aa18.07■□□□□ 0.48
HMGCR-208ENST00000509431 ANKRD13DQ6ZTN6 518 aa18.07■□□□□ 0.48
HMGCR-208ENST00000509431 NLRP10Q86W26 655 aa18.07■□□□□ 0.48
HMGCR-208ENST00000509431 SLC10A4Q96EP9 437 aa18.07■□□□□ 0.48
HMGCR-208ENST00000509431 TRMT112Q9UI30 125 aaKnown RBP18.07■□□□□ 0.48
HMGCR-208ENST00000509431 SCAF8Q9UPN6 1271 aaKnown RBP18.07■□□□□ 0.48
HMGCR-208ENST00000509431 HTATIP2Q9BUP3 242 aa18.06■□□□□ 0.48
HMGCR-208ENST00000509431 NR2E3Q9Y5X4 410 aa18.06■□□□□ 0.48
HMGCR-208ENST00000509431 EIF4G2P78344 907 aaKnown RBP eCLIP18.05■□□□□ 0.48
HMGCR-208ENST00000509431 DCTN1Q14203 1278 aa18.05■□□□□ 0.48
HMGCR-208ENST00000509431 GPR153Q6NV75 609 aa18.05■□□□□ 0.48
HMGCR-208ENST00000509431 CELF1Q92879 486 aaKnown RBP18.05■□□□□ 0.48
HMGCR-208ENST00000509431 PODXL2Q9NZ53 605 aa18.05■□□□□ 0.48
HMGCR-208ENST00000509431 ANGEL1Q9UNK9 670 aaKnown RBP18.05■□□□□ 0.48
HMGCR-208ENST00000509431 PTCH2Q9Y6C5 1203 aa18.05■□□□□ 0.48
HMGCR-208ENST00000509431 UNCXA6NJT0 531 aa18.04■□□□□ 0.48
HMGCR-208ENST00000509431 MMP14P50281 582 aa18.04■□□□□ 0.48
HMGCR-208ENST00000509431 EIF4A1P60842 406 aaKnown RBP18.04■□□□□ 0.48
HMGCR-208ENST00000509431 SF3B3Q15393 1217 aaKnown RBP18.04■□□□□ 0.48
HMGCR-208ENST00000509431 NBPF9Q3BBW0 867 aa18.04■□□□□ 0.48
HMGCR-208ENST00000509431 WNK4Q96J92 1243 aa18.04■□□□□ 0.48
HMGCR-208ENST00000509431 COL25A1Q9BXS0 654 aaPredicted RBP18.04■□□□□ 0.48
HMGCR-208ENST00000509431 MIS18AQ9NYP9 233 aa18.04■□□□□ 0.48
HMGCR-208ENST00000509431 ZNF646O15015 1829 aaPredicted RBP18.03■□□□□ 0.48
HMGCR-208ENST00000509431 USP17L3A6NCW0 530 aa18.03■□□□□ 0.48
HMGCR-208ENST00000509431 USP17L4A6NCW7 530 aa18.03■□□□□ 0.48
HMGCR-208ENST00000509431 PRKG1Q13976 671 aa18.03■□□□□ 0.48
HMGCR-208ENST00000509431 MAP3K11Q16584 847 aa18.03■□□□□ 0.48
HMGCR-208ENST00000509431 USP17L1Q7RTZ2 530 aa18.03■□□□□ 0.48
HMGCR-208ENST00000509431 APOBEC3FQ8IUX4 373 aaKnown RBP18.03■□□□□ 0.48
HMGCR-208ENST00000509431 WNT10BO00744 389 aa18.02■□□□□ 0.48
HMGCR-208ENST00000509431 OGFOD1Q8N543 542 aa18.02■□□□□ 0.48
HMGCR-208ENST00000509431 NKX2-3Q8TAU0 364 aa18.02■□□□□ 0.48
HMGCR-208ENST00000509431 TIMELESSQ9UNS1 1208 aa18.02■□□□□ 0.48
HMGCR-208ENST00000509431 STXBP5LQ9Y2K9 1186 aa18.02■□□□□ 0.48
HMGCR-208ENST00000509431 COL1A1P02452 1464 aaPredicted RBP18.01■□□□□ 0.47
HMGCR-208ENST00000509431 SOX1O00570 391 aaPredicted RBP18.01■□□□□ 0.47
HMGCR-208ENST00000509431 UFL1O94874 794 aa18.01■□□□□ 0.47
HMGCR-208ENST00000509431 CAP1Q01518 475 aa18.01■□□□□ 0.47
HMGCR-208ENST00000509431 LRP10Q7Z4F1 713 aa18.01■□□□□ 0.47
HMGCR-208ENST00000509431 PODNQ7Z5L7 613 aa18.01■□□□□ 0.47
HMGCR-208ENST00000509431 GGA1Q9UJY5 639 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms