RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 COL23A1Q86Y22 540 aaPredicted RBP15.37■□□□□ 0.05
LYSMD3-204ENST00000509384 CCDC24Q8N4L8 307 aa15.37■□□□□ 0.05
LYSMD3-204ENST00000509384 MROH5Q6ZUA9 1318 aa15.37■□□□□ 0.05
LYSMD3-204ENST00000509384 ATP5JP18859 108 aa15.36■□□□□ 0.05
LYSMD3-204ENST00000509384 TM4SF1P30408 202 aa15.36■□□□□ 0.05
LYSMD3-204ENST00000509384 TIMM10P62072 90 aa15.36■□□□□ 0.05
LYSMD3-204ENST00000509384 ANKRD18AQ8IVF6 992 aa15.36■□□□□ 0.05
LYSMD3-204ENST00000509384 SERPINB2P05120 415 aa15.35■□□□□ 0.05
LYSMD3-204ENST00000509384 ST5P78524 1137 aa15.35■□□□□ 0.05
LYSMD3-204ENST00000509384 ATP2B3Q16720 1220 aa15.35■□□□□ 0.05
LYSMD3-204ENST00000509384 PRR5LQ6MZQ0 368 aa15.35■□□□□ 0.05
LYSMD3-204ENST00000509384 PNPLA7Q6ZV29 1317 aa15.35■□□□□ 0.05
LYSMD3-204ENST00000509384 VGLL2Q8N8G2 317 aa15.35■□□□□ 0.05
LYSMD3-204ENST00000509384 UPF1Q92900 1129 aaKnown RBP eCLIP15.35■□□□□ 0.05
LYSMD3-204ENST00000509384 TBC1D32Q96NH3 1257 aa15.35■□□□□ 0.05
LYSMD3-204ENST00000509384 IPO9Q96P70 1041 aaKnown RBP15.35■□□□□ 0.05
LYSMD3-204ENST00000509384 BOLA2Q9H3K6 86 aa15.35■□□□□ 0.05
LYSMD3-204ENST00000509384 ANO8Q9HCE9 1232 aaPredicted RBP15.35■□□□□ 0.05
LYSMD3-204ENST00000509384 STK32BQ9NY57 414 aa15.35■□□□□ 0.05
LYSMD3-204ENST00000509384 NLGN1Q8N2Q7 840 aa15.34■□□□□ 0.05
LYSMD3-204ENST00000509384 EVI5LQ96CN4 794 aa15.34■□□□□ 0.05
LYSMD3-204ENST00000509384 POLRMTO00411 1230 aaKnown RBP15.33■□□□□ 0.05
LYSMD3-204ENST00000509384 PDE8BO95263 885 aa15.33■□□□□ 0.05
LYSMD3-204ENST00000509384 CHMLP26374 656 aa15.33■□□□□ 0.05
LYSMD3-204ENST00000509384 DDR1Q08345 913 aa15.33■□□□□ 0.05
LYSMD3-204ENST00000509384 PUM3Q15397 648 aaKnown RBP15.33■□□□□ 0.05
LYSMD3-204ENST00000509384 GORABQ5T7V8 394 aa15.33■□□□□ 0.05
LYSMD3-204ENST00000509384 TUBGCP6Q96RT7 1819 aa15.33■□□□□ 0.04
LYSMD3-204ENST00000509384 SLC15A2Q16348 729 aa15.33■□□□□ 0.04
LYSMD3-204ENST00000509384 XAGE2Q96GT9 111 aa15.33■□□□□ 0.04
LYSMD3-204ENST00000509384 C22orf23Q9BZE7 217 aa15.33■□□□□ 0.04
LYSMD3-204ENST00000509384 ADORA1P30542 326 aa15.32■□□□□ 0.04
LYSMD3-204ENST00000509384 CCDC158Q5M9N0 1113 aa15.32■□□□□ 0.04
LYSMD3-204ENST00000509384 TTC39AQ5SRH9 613 aa15.32■□□□□ 0.04
LYSMD3-204ENST00000509384 DDX46Q7L014 1031 aaKnown RBP15.32■□□□□ 0.04
LYSMD3-204ENST00000509384 DEFB132Q7Z7B7 95 aa15.32■□□□□ 0.04
LYSMD3-204ENST00000509384 HELBQ8NG08 1087 aaPredicted RBP15.32■□□□□ 0.04
LYSMD3-204ENST00000509384 LPIN2Q92539 896 aa15.32■□□□□ 0.04
LYSMD3-204ENST00000509384 DNAJC2Q99543 621 aaKnown RBP15.32■□□□□ 0.04
LYSMD3-204ENST00000509384 HAUS7Q99871 368 aa15.32■□□□□ 0.04
LYSMD3-204ENST00000509384 ESYT1Q9BSJ8 1104 aa15.32■□□□□ 0.04
LYSMD3-204ENST00000509384 BSDC1Q9NW68 430 aaPredicted RBP15.32■□□□□ 0.04
LYSMD3-204ENST00000509384 REC8O95072 547 aa15.31■□□□□ 0.04
LYSMD3-204ENST00000509384 CELF1Q92879 486 aaKnown RBP15.31■□□□□ 0.04
LYSMD3-204ENST00000509384 TNRC6CQ9HCJ0 1690 aaKnown RBP15.31■□□□□ 0.04
LYSMD3-204ENST00000509384 IFIT1P09914 478 aaKnown RBP15.3■□□□□ 0.04
LYSMD3-204ENST00000509384 SLC5A1P13866 664 aa15.3■□□□□ 0.04
LYSMD3-204ENST00000509384 FGFR2P21802 821 aa15.3■□□□□ 0.04
LYSMD3-204ENST00000509384 RPS8P62241 208 aaKnown RBP15.3■□□□□ 0.04
LYSMD3-204ENST00000509384 CHRNDQ07001 517 aa15.3■□□□□ 0.04
LYSMD3-204ENST00000509384 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.3■□□□□ 0.04
LYSMD3-204ENST00000509384 FSD1Q9BTV5 496 aa15.3■□□□□ 0.04
LYSMD3-204ENST00000509384 DIAPH3Q9NSV4 1193 aa15.3■□□□□ 0.04
LYSMD3-204ENST00000509384 COL4A1P02462 1669 aa15.29■□□□□ 0.04
LYSMD3-204ENST00000509384 HIP1O00291 1037 aa15.29■□□□□ 0.04
LYSMD3-204ENST00000509384 RPGRQ92834 1020 aaKnown RBP15.29■□□□□ 0.04
LYSMD3-204ENST00000509384 TAF5LO75529 589 aa15.28■□□□□ 0.04
LYSMD3-204ENST00000509384 MMP10P09238 476 aa15.28■□□□□ 0.04
LYSMD3-204ENST00000509384 MSL1Q68DK7 614 aa15.28■□□□□ 0.04
LYSMD3-204ENST00000509384 CCDC125Q86Z20 511 aa15.28■□□□□ 0.04
LYSMD3-204ENST00000509384 EDC3Q96F86 508 aaKnown RBP15.28■□□□□ 0.04
LYSMD3-204ENST00000509384 DDRGK1Q96HY6 314 aa15.28■□□□□ 0.04
LYSMD3-204ENST00000509384 PARP3Q9Y6F1 533 aa15.28■□□□□ 0.04
LYSMD3-204ENST00000509384 RBM25P49756 843 aaKnown RBP15.27■□□□□ 0.04
LYSMD3-204ENST00000509384 GRAPQ13588 217 aa15.27■□□□□ 0.04
LYSMD3-204ENST00000509384 CRY2Q49AN0 593 aa15.27■□□□□ 0.04
LYSMD3-204ENST00000509384 GRAPLQ8TC17 118 aaPredicted RBP15.27■□□□□ 0.04
LYSMD3-204ENST00000509384 RUFY2Q8WXA3 655 aa15.27■□□□□ 0.04
LYSMD3-204ENST00000509384 PAG1Q9NWQ8 432 aa15.27■□□□□ 0.04
LYSMD3-204ENST00000509384 MINPP1Q9UNW1 487 aa15.27■□□□□ 0.04
LYSMD3-204ENST00000509384 NDUFB9Q9Y6M9 179 aa15.27■□□□□ 0.04
LYSMD3-204ENST00000509384 RFX7Q2KHR2 1363 aa15.27■□□□□ 0.04
LYSMD3-204ENST00000509384 CWC27Q6UX04 472 aaKnown RBP15.27■□□□□ 0.03
LYSMD3-204ENST00000509384 GOLIM4O00461 696 aa15.26■□□□□ 0.03
LYSMD3-204ENST00000509384 SGSM2O43147 1006 aa15.26■□□□□ 0.03
LYSMD3-204ENST00000509384 UQCRFS1P1P0C7P4 283 aa15.26■□□□□ 0.03
LYSMD3-204ENST00000509384 CCDC102BQ68D86 513 aa15.26■□□□□ 0.03
LYSMD3-204ENST00000509384 RBM17Q96I25 401 aaKnown RBP15.26■□□□□ 0.03
LYSMD3-204ENST00000509384 ZNF512BQ96KM6 892 aaPredicted RBP15.26■□□□□ 0.03
LYSMD3-204ENST00000509384 BRIP1Q9BX63 1249 aa15.26■□□□□ 0.03
LYSMD3-204ENST00000509384 USP26Q9BXU7 913 aa15.26■□□□□ 0.03
LYSMD3-204ENST00000509384 ANKRD2Q9GZV1 360 aa15.26■□□□□ 0.03
LYSMD3-204ENST00000509384 ANO2Q9NQ90 1003 aa15.26■□□□□ 0.03
LYSMD3-204ENST00000509384 SNAP23O00161 211 aa15.25■□□□□ 0.03
LYSMD3-204ENST00000509384 PHKA1P46020 1223 aa15.25■□□□□ 0.03
LYSMD3-204ENST00000509384 FKBP4Q02790 459 aaKnown RBP eCLIP15.25■□□□□ 0.03
LYSMD3-204ENST00000509384 UBE4AQ14139 1066 aa15.25■□□□□ 0.03
LYSMD3-204ENST00000509384 KBTBD3Q8NAB2 608 aa15.25■□□□□ 0.03
LYSMD3-204ENST00000509384 RAD50Q92878 1312 aa15.25■□□□□ 0.03
LYSMD3-204ENST00000509384 SPEF2Q9C093 1822 aa15.25■□□□□ 0.03
LYSMD3-204ENST00000509384 CASZ1Q86V15 1759 aa15.24■□□□□ 0.03
LYSMD3-204ENST00000509384 KLRG2A4D1S0 409 aaPredicted RBP15.24■□□□□ 0.03
LYSMD3-204ENST00000509384 ARID4AP29374 1257 aaPredicted RBP15.24■□□□□ 0.03
LYSMD3-204ENST00000509384 KCNJ4P48050 445 aa15.24■□□□□ 0.03
LYSMD3-204ENST00000509384 SCARF1Q14162 830 aa15.24■□□□□ 0.03
LYSMD3-204ENST00000509384 IL25Q9H293 177 aa15.24■□□□□ 0.03
LYSMD3-204ENST00000509384 SNRKQ9NRH2 765 aa15.24■□□□□ 0.03
LYSMD3-204ENST00000509384 MCAMP43121 646 aa15.23■□□□□ 0.03
LYSMD3-204ENST00000509384 ZAP70P43403 619 aa15.23■□□□□ 0.03
LYSMD3-204ENST00000509384 NMIQ13287 307 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms