RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 MCM2P49736 904 aa17.86■□□□□ 0.45
PHF3-209ENST00000509330 VPS72Q15906 364 aa17.86■□□□□ 0.45
PHF3-209ENST00000509330 ATP2B3Q16720 1220 aa17.86■□□□□ 0.45
PHF3-209ENST00000509330 TTC14Q96N46 770 aa17.86■□□□□ 0.45
PHF3-209ENST00000509330 PDE8AO60658 829 aa17.86■□□□□ 0.45
PHF3-209ENST00000509330 NUCB2P80303 420 aa17.86■□□□□ 0.45
PHF3-209ENST00000509330 CCDC158Q5M9N0 1113 aa17.86■□□□□ 0.45
PHF3-209ENST00000509330 CCDC83Q8IWF9 413 aa17.86■□□□□ 0.45
PHF3-209ENST00000509330 A0A0G2JLW4 131 aa17.85■□□□□ 0.45
PHF3-209ENST00000509330 ERVV-1B6SEH8 477 aa17.85■□□□□ 0.45
PHF3-209ENST00000509330 NECAB1Q8N987 351 aa17.85■□□□□ 0.45
PHF3-209ENST00000509330 PLA2G12BQ9BX93 195 aa17.85■□□□□ 0.45
PHF3-209ENST00000509330 CYP46A1Q9Y6A2 500 aa17.85■□□□□ 0.45
PHF3-209ENST00000509330 ZAP70P43403 619 aa17.85■□□□□ 0.45
PHF3-209ENST00000509330 CWC22Q9HCG8 908 aaKnown RBP17.85■□□□□ 0.45
PHF3-209ENST00000509330 NCLP19338 710 aaKnown RBP17.85■□□□□ 0.45
PHF3-209ENST00000509330 SH3TC1Q8TE82 1336 aa17.84■□□□□ 0.45
PHF3-209ENST00000509330 CDHR2Q9BYE9 1310 aa17.84■□□□□ 0.45
PHF3-209ENST00000509330 MCMDC2Q4G0Z9 681 aa17.84■□□□□ 0.45
PHF3-209ENST00000509330 UTP14AQ9BVJ6 771 aaKnown RBP17.84■□□□□ 0.45
PHF3-209ENST00000509330 LRRC2Q9BYS8 371 aa17.84■□□□□ 0.45
PHF3-209ENST00000509330 RIPOR2Q9Y4F9 1068 aa17.84■□□□□ 0.45
PHF3-209ENST00000509330 WASHC4Q2M389 1173 aa17.84■□□□□ 0.45
PHF3-209ENST00000509330 GPR108Q9NPR9 543 aa17.84■□□□□ 0.45
PHF3-209ENST00000509330 STK3Q13188 491 aa17.83■□□□□ 0.45
PHF3-209ENST00000509330 CUL4AQ13619 759 aa17.83■□□□□ 0.45
PHF3-209ENST00000509330 AKAP2Q9Y2D5 859 aa17.83■□□□□ 0.45
PHF3-209ENST00000509330 MYH14Q7Z406 1995 aaKnown RBP17.83■□□□□ 0.45
PHF3-209ENST00000509330 RIC1Q4ADV7 1423 aa17.83■□□□□ 0.44
PHF3-209ENST00000509330 HSPA1LP34931 641 aa17.83■□□□□ 0.44
PHF3-209ENST00000509330 LIMCH1Q9UPQ0 1083 aa17.83■□□□□ 0.44
PHF3-209ENST00000509330 NUP98P52948 1817 aa17.83■□□□□ 0.44
PHF3-209ENST00000509330 EPB41L2O43491 1005 aaKnown RBP17.82■□□□□ 0.44
PHF3-209ENST00000509330 CYP2E1P05181 493 aaPredicted RBP17.82■□□□□ 0.44
PHF3-209ENST00000509330 SMARCC1Q92922 1105 aaPredicted RBP17.82■□□□□ 0.44
PHF3-209ENST00000509330 ZSWIM6Q9HCJ5 1215 aa17.82■□□□□ 0.44
PHF3-209ENST00000509330 SRP68Q9UHB9 627 aaKnown RBP17.82■□□□□ 0.44
PHF3-209ENST00000509330 RNF20Q5VTR2 975 aa17.82■□□□□ 0.44
PHF3-209ENST00000509330 M0R2C6 588 aa17.81■□□□□ 0.44
PHF3-209ENST00000509330 BLOC1S2Q6QNY1 142 aa17.81■□□□□ 0.44
PHF3-209ENST00000509330 MPHOSPH8Q99549 860 aa17.81■□□□□ 0.44
PHF3-209ENST00000509330 GOLGA6L22H0YM25 854 aa17.81■□□□□ 0.44
PHF3-209ENST00000509330 PHF14O94880 888 aa17.81■□□□□ 0.44
PHF3-209ENST00000509330 CYP21A2P08686 494 aa17.81■□□□□ 0.44
PHF3-209ENST00000509330 GDPD2Q9HCC8 539 aa17.81■□□□□ 0.44
PHF3-209ENST00000509330 PRPF40AO75400 957 aaKnown RBP17.8■□□□□ 0.44
PHF3-209ENST00000509330 MCAMP43121 646 aa17.8■□□□□ 0.44
PHF3-209ENST00000509330 PHKA1P46020 1223 aa17.8■□□□□ 0.44
PHF3-209ENST00000509330 FNBP4Q8N3X1 1017 aaPredicted RBP17.8■□□□□ 0.44
PHF3-209ENST00000509330 OSBP2Q969R2 916 aa17.8■□□□□ 0.44
PHF3-209ENST00000509330 TPCN1Q9ULQ1 816 aa17.8■□□□□ 0.44
PHF3-209ENST00000509330 MAST3O60307 1309 aa17.8■□□□□ 0.44
PHF3-209ENST00000509330 GTF2E1P29083 439 aaPredicted RBP17.8■□□□□ 0.44
PHF3-209ENST00000509330 ME3Q16798 604 aa17.8■□□□□ 0.44
PHF3-209ENST00000509330 TTLL5Q6EMB2 1281 aa17.8■□□□□ 0.44
PHF3-209ENST00000509330 AMIGO3Q86WK7 504 aa17.8■□□□□ 0.44
PHF3-209ENST00000509330 IL17RAQ96F46 866 aa17.8■□□□□ 0.44
PHF3-209ENST00000509330 DDX49Q9Y6V7 483 aaKnown RBP17.8■□□□□ 0.44
PHF3-209ENST00000509330 GNPATO15228 680 aa17.79■□□□□ 0.44
PHF3-209ENST00000509330 C3orf67Q6ZVT6 689 aa17.79■□□□□ 0.44
PHF3-209ENST00000509330 PDE8BO95263 885 aa17.79■□□□□ 0.44
PHF3-209ENST00000509330 CHST3Q7LGC8 479 aa17.79■□□□□ 0.44
PHF3-209ENST00000509330 BRPF3Q9ULD4 1205 aa17.79■□□□□ 0.44
PHF3-209ENST00000509330 IQSEC3Q9UPP2 1182 aaPredicted RBP17.79■□□□□ 0.44
PHF3-209ENST00000509330 WTIPA6NIX2 430 aaPredicted RBP17.79■□□□□ 0.44
PHF3-209ENST00000509330 RNF113AO15541 343 aaKnown RBP17.79■□□□□ 0.44
PHF3-209ENST00000509330 PPFIA3O75145 1194 aa17.79■□□□□ 0.44
PHF3-209ENST00000509330 IDH1O75874 414 aaKnown RBP17.79■□□□□ 0.44
PHF3-209ENST00000509330 NTSR2O95665 410 aa17.79■□□□□ 0.44
PHF3-209ENST00000509330 HAND2P61296 217 aa17.79■□□□□ 0.44
PHF3-209ENST00000509330 ERFEQ4G0M1 354 aa17.79■□□□□ 0.44
PHF3-209ENST00000509330 USPL1Q5W0Q7 1092 aa17.79■□□□□ 0.44
PHF3-209ENST00000509330 NWD2Q9ULI1 1742 aa17.78■□□□□ 0.44
PHF3-209ENST00000509330 GOLGB1Q14789 3259 aaKnown RBP17.78■□□□□ 0.44
PHF3-209ENST00000509330 SMC3Q9UQE7 1217 aa17.78■□□□□ 0.44
PHF3-209ENST00000509330 AFF2P51816 1311 aa17.78■□□□□ 0.44
PHF3-209ENST00000509330 CCNL1Q9UK58 526 aaPredicted RBP17.78■□□□□ 0.44
PHF3-209ENST00000509330 PSMA5P28066 241 aa17.77■□□□□ 0.44
PHF3-209ENST00000509330 ST3GAL1Q11201 340 aa17.77■□□□□ 0.44
PHF3-209ENST00000509330 ZMYM1Q5SVZ6 1142 aa17.77■□□□□ 0.44
PHF3-209ENST00000509330 VGLL2Q8N8G2 317 aa17.77■□□□□ 0.44
PHF3-209ENST00000509330 INTS4Q96HW7 963 aaKnown RBP17.77■□□□□ 0.44
PHF3-209ENST00000509330 HSPD1P10809 573 aaKnown RBP17.77■□□□□ 0.44
PHF3-209ENST00000509330 TBC1D9BQ66K14 1250 aa17.77■□□□□ 0.44
PHF3-209ENST00000509330 CCDC102BQ68D86 513 aa17.77■□□□□ 0.44
PHF3-209ENST00000509330 STOX1Q6ZVD7 989 aa17.77■□□□□ 0.44
PHF3-209ENST00000509330 KCNB2Q92953 911 aa17.77■□□□□ 0.44
PHF3-209ENST00000509330 PUS7LQ9H0K6 701 aaKnown RBP17.77■□□□□ 0.44
PHF3-209ENST00000509330 NAP1L2Q9ULW6 460 aaPredicted RBP17.77■□□□□ 0.44
PHF3-209ENST00000509330 RPS6KB1P23443 525 aa17.76■□□□□ 0.43
PHF3-209ENST00000509330 FGD1P98174 961 aa17.76■□□□□ 0.43
PHF3-209ENST00000509330 BRD1O95696 1058 aa17.76■□□□□ 0.43
PHF3-209ENST00000509330 GJB2P29033 226 aa17.76■□□□□ 0.43
PHF3-209ENST00000509330 NEK1Q96PY6 1258 aa17.76■□□□□ 0.43
PHF3-209ENST00000509330 TM6SF1Q9BZW5 370 aa17.76■□□□□ 0.43
PHF3-209ENST00000509330 RPAP1Q9BWH6 1393 aaPredicted RBP17.76■□□□□ 0.43
PHF3-209ENST00000509330 HSP90B1P14625 803 aaKnown RBP17.76■□□□□ 0.43
PHF3-209ENST00000509330 CERKQ8TCT0 537 aa17.76■□□□□ 0.43
PHF3-209ENST00000509330 GJD4Q96KN9 370 aaPredicted RBP17.76■□□□□ 0.43
PHF3-209ENST00000509330 ZNF652Q9Y2D9 606 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms