RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 PPLO60437 1756 aa5.34□□□□□ -1.56
HMGN1P11-201ENST00000508668 KIF1AQ12756 1690 aa5.34□□□□□ -1.56
HMGN1P11-201ENST00000508668 LAMC1P11047 1609 aa5.34□□□□□ -1.56
HMGN1P11-201ENST00000508668 TNS3Q68CZ2 1445 aa5.33□□□□□ -1.56
HMGN1P11-201ENST00000508668 RAB3GAP2Q9H2M9 1393 aa5.33□□□□□ -1.56
HMGN1P11-201ENST00000508668 SOBPA7XYQ1 873 aa5.33□□□□□ -1.56
HMGN1P11-201ENST00000508668 WASLO00401 505 aaPredicted RBP5.33□□□□□ -1.56
HMGN1P11-201ENST00000508668 DKK1O94907 266 aa5.33□□□□□ -1.56
HMGN1P11-201ENST00000508668 CSB-PGBD3P0DP91 1061 aa5.33□□□□□ -1.56
HMGN1P11-201ENST00000508668 CENPCQ03188 943 aa5.33□□□□□ -1.56
HMGN1P11-201ENST00000508668 PDE3BQ13370 1112 aa5.33□□□□□ -1.56
HMGN1P11-201ENST00000508668 ELOAQ14241 798 aaKnown RBP5.33□□□□□ -1.56
HMGN1P11-201ENST00000508668 TNS4Q8IZW8 715 aa5.33□□□□□ -1.56
HMGN1P11-201ENST00000508668 RNF217Q8TC41 542 aa5.33□□□□□ -1.56
HMGN1P11-201ENST00000508668 HINFPQ9BQA5 517 aa5.33□□□□□ -1.56
HMGN1P11-201ENST00000508668 STRN4Q9NRL3 753 aa5.33□□□□□ -1.56
HMGN1P11-201ENST00000508668 BTG4Q9NY30 223 aa5.33□□□□□ -1.56
HMGN1P11-201ENST00000508668 TECPR2O15040 1411 aa5.32□□□□□ -1.56
HMGN1P11-201ENST00000508668 PIK3C2GO75747 1445 aa5.32□□□□□ -1.56
HMGN1P11-201ENST00000508668 SBNO1A3KN83 1393 aa5.32□□□□□ -1.56
HMGN1P11-201ENST00000508668 MAN1A2O60476 641 aa5.32□□□□□ -1.56
HMGN1P11-201ENST00000508668 GTF2E1P29083 439 aaPredicted RBP5.32□□□□□ -1.56
HMGN1P11-201ENST00000508668 RNF144AP50876 292 aaPredicted RBP5.32□□□□□ -1.56
HMGN1P11-201ENST00000508668 SMTNP53814 917 aa5.32□□□□□ -1.56
HMGN1P11-201ENST00000508668 VPS72Q15906 364 aa5.32□□□□□ -1.56
HMGN1P11-201ENST00000508668 NBPF8Q3BBV2 869 aa5.32□□□□□ -1.56
HMGN1P11-201ENST00000508668 TMEM164Q5U3C3 297 aa5.32□□□□□ -1.56
HMGN1P11-201ENST00000508668 TMEM214Q6NUQ4 689 aaKnown RBP5.32□□□□□ -1.56
HMGN1P11-201ENST00000508668 PRICKLE2Q7Z3G6 844 aa5.32□□□□□ -1.56
HMGN1P11-201ENST00000508668 ABTB2Q8N961 1025 aa5.32□□□□□ -1.56
HMGN1P11-201ENST00000508668 KIFC2Q96AC6 838 aa5.32□□□□□ -1.56
HMGN1P11-201ENST00000508668 ZSCAN10Q96SZ4 725 aaPredicted RBP5.32□□□□□ -1.56
HMGN1P11-201ENST00000508668 SENP2Q9HC62 589 aa5.32□□□□□ -1.56
HMGN1P11-201ENST00000508668 USP35Q9P2H5 1018 aa5.32□□□□□ -1.56
HMGN1P11-201ENST00000508668 DNMT3LQ9UJW3 386 aa5.32□□□□□ -1.56
HMGN1P11-201ENST00000508668 HRH3Q9Y5N1 445 aa5.32□□□□□ -1.56
HMGN1P11-201ENST00000508668 ATRNO75882 1429 aa5.31□□□□□ -1.56
HMGN1P11-201ENST00000508668 BLMP54132 1417 aaPredicted RBP5.31□□□□□ -1.56
HMGN1P11-201ENST00000508668 SPATA31E1Q6ZUB1 1445 aa5.31□□□□□ -1.56
HMGN1P11-201ENST00000508668 ANKARQ7Z5J8 1434 aa5.31□□□□□ -1.56
HMGN1P11-201ENST00000508668 PRAG1Q86YV5 1406 aa5.31□□□□□ -1.56
HMGN1P11-201ENST00000508668 PLEKHH1Q9ULM0 1364 aa5.31□□□□□ -1.56
HMGN1P11-201ENST00000508668 CARNS1A5YM72 827 aa5.31□□□□□ -1.56
HMGN1P11-201ENST00000508668 A6NJY4 79 aa5.31□□□□□ -1.56
HMGN1P11-201ENST00000508668 C11orf95C9JLR9 678 aaPredicted RBP5.31□□□□□ -1.56
HMGN1P11-201ENST00000508668 WFS1O76024 890 aa5.31□□□□□ -1.56
HMGN1P11-201ENST00000508668 GPC1P35052 558 aa5.31□□□□□ -1.56
HMGN1P11-201ENST00000508668 TBCELQ5QJ74 424 aa5.31□□□□□ -1.56
HMGN1P11-201ENST00000508668 LYSMD3Q7Z3D4 306 aa5.31□□□□□ -1.56
HMGN1P11-201ENST00000508668 RETREG2Q8NC44 543 aa5.31□□□□□ -1.56
HMGN1P11-201ENST00000508668 TRIM47Q96LD4 638 aa5.31□□□□□ -1.56
HMGN1P11-201ENST00000508668 FHDC1Q9C0D6 1143 aaPredicted RBP5.31□□□□□ -1.56
HMGN1P11-201ENST00000508668 PPP1R1BQ9UD71 204 aaPredicted RBP5.31□□□□□ -1.56
HMGN1P11-201ENST00000508668 MYOM2P54296 1465 aa5.31□□□□□ -1.56
HMGN1P11-201ENST00000508668 FAM181BA6NEQ2 426 aa5.3□□□□□ -1.56
HMGN1P11-201ENST00000508668 POTECB2RU33 542 aa5.3□□□□□ -1.56
HMGN1P11-201ENST00000508668 M0R2N6 131 aa5.3□□□□□ -1.56
HMGN1P11-201ENST00000508668 SNRPBP14678 240 aaKnown RBP5.3□□□□□ -1.56
HMGN1P11-201ENST00000508668 RHOQP17081 205 aa5.3□□□□□ -1.56
HMGN1P11-201ENST00000508668 NLRP13Q86W25 1043 aa5.3□□□□□ -1.56
HMGN1P11-201ENST00000508668 SLC9A9Q8IVB4 645 aa5.3□□□□□ -1.56
HMGN1P11-201ENST00000508668 NUDT16Q96DE0 195 aaKnown RBP5.3□□□□□ -1.56
HMGN1P11-201ENST00000508668 SLC4A9Q96Q91 983 aa5.3□□□□□ -1.56
HMGN1P11-201ENST00000508668 CDK19Q9BWU1 502 aa5.3□□□□□ -1.56
HMGN1P11-201ENST00000508668 GRIP2Q9C0E4 1043 aa5.3□□□□□ -1.56
HMGN1P11-201ENST00000508668 TSPAN10Q9H1Z9 355 aaPredicted RBP5.3□□□□□ -1.56
HMGN1P11-201ENST00000508668 SCHIP1Q9P0W5 487 aaPredicted RBP5.3□□□□□ -1.56
HMGN1P11-201ENST00000508668 USP3Q9Y6I4 520 aa5.3□□□□□ -1.56
HMGN1P11-201ENST00000508668 RALGAPBQ86X10 1494 aa5.3□□□□□ -1.56
HMGN1P11-201ENST00000508668 PXDNQ92626 1479 aa5.3□□□□□ -1.56
HMGN1P11-201ENST00000508668 COL22A1Q8NFW1 1626 aaPredicted RBP5.3□□□□□ -1.56
HMGN1P11-201ENST00000508668 KNDC1Q76NI1 1749 aa5.29□□□□□ -1.56
HMGN1P11-201ENST00000508668 NRXN1Q9ULB1 1477 aa5.29□□□□□ -1.56
HMGN1P11-201ENST00000508668 FAM83GA6ND36 823 aa5.29□□□□□ -1.56
HMGN1P11-201ENST00000508668 PRMT3O60678 531 aa5.29□□□□□ -1.56
HMGN1P11-201ENST00000508668 PHKA2P46019 1235 aa5.29□□□□□ -1.56
HMGN1P11-201ENST00000508668 EPHA4P54764 986 aa5.29□□□□□ -1.56
HMGN1P11-201ENST00000508668 ZC3H6P61129 1189 aaKnown RBP5.29□□□□□ -1.56
HMGN1P11-201ENST00000508668 POU4F2Q12837 409 aa5.29□□□□□ -1.56
HMGN1P11-201ENST00000508668 MTFR1Q15390 333 aa5.29□□□□□ -1.56
HMGN1P11-201ENST00000508668 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.29□□□□□ -1.56
HMGN1P11-201ENST00000508668 GNASQ5JWF2 1037 aa5.29□□□□□ -1.56
HMGN1P11-201ENST00000508668 NUTM2GQ5VZR2 741 aa5.29□□□□□ -1.56
HMGN1P11-201ENST00000508668 FAM196AQ6ZSG2 479 aa5.29□□□□□ -1.56
HMGN1P11-201ENST00000508668 NBPF15Q8N660 670 aa5.29□□□□□ -1.56
HMGN1P11-201ENST00000508668 GAS2L2Q8NHY3 880 aa5.29□□□□□ -1.56
HMGN1P11-201ENST00000508668 RHBDD1Q8TEB9 315 aa5.29□□□□□ -1.56
HMGN1P11-201ENST00000508668 SCG3Q8WXD2 468 aaKnown RBP5.29□□□□□ -1.56
HMGN1P11-201ENST00000508668 CABP1Q9NZU7 370 aa5.29□□□□□ -1.56
HMGN1P11-201ENST00000508668 FMN2Q9NZ56 1722 aa5.28□□□□□ -1.56
HMGN1P11-201ENST00000508668 BCL9LQ86UU0 1499 aa5.28□□□□□ -1.56
HMGN1P11-201ENST00000508668 USP32Q8NFA0 1604 aa5.28□□□□□ -1.56
HMGN1P11-201ENST00000508668 TMEM88BA6NKF7 163 aa5.28□□□□□ -1.56
HMGN1P11-201ENST00000508668 CDK2AP1O14519 115 aa5.28□□□□□ -1.56
HMGN1P11-201ENST00000508668 APBA3O96018 575 aa5.28□□□□□ -1.56
HMGN1P11-201ENST00000508668 PLA2G4AP47712 749 aa5.28□□□□□ -1.56
HMGN1P11-201ENST00000508668 FOXK2Q01167 660 aa5.28□□□□□ -1.56
HMGN1P11-201ENST00000508668 NEUROD1Q13562 356 aa5.28□□□□□ -1.56
HMGN1P11-201ENST00000508668 SWI5Q1ZZU3 235 aa5.28□□□□□ -1.56
HMGN1P11-201ENST00000508668 C4orf17Q53FE4 359 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms