RNA–Protein interactions for RNA: ENST00000507223.1

HMGCLL1-207, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 3

Gene HMGCLL1, Length 512 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-207ENST00000507223 USP20Q9Y2K6 914 aa7.53□□□□□ -1.2
HMGCLL1-207ENST00000507223 SHROOM4Q9ULL8 1493 aa7.52□□□□□ -1.21
HMGCLL1-207ENST00000507223 NOS3P29474 1203 aa7.52□□□□□ -1.21
HMGCLL1-207ENST00000507223 TRIP4Q15650 581 aaPredicted RBP7.52□□□□□ -1.21
HMGCLL1-207ENST00000507223 FBXO11Q86XK2 927 aa7.52□□□□□ -1.21
HMGCLL1-207ENST00000507223 COL17A1Q9UMD9 1497 aaPredicted RBP7.51□□□□□ -1.21
HMGCLL1-207ENST00000507223 NFKB1P19838 968 aa7.51□□□□□ -1.21
HMGCLL1-207ENST00000507223 PRR23CQ6ZRP0 262 aa7.51□□□□□ -1.21
HMGCLL1-207ENST00000507223 DTWD1Q8N5C7 304 aa7.51□□□□□ -1.21
HMGCLL1-207ENST00000507223 MEGF10Q96KG7 1140 aa7.51□□□□□ -1.21
HMGCLL1-207ENST00000507223 PCMTD2Q9NV79 361 aa7.51□□□□□ -1.21
HMGCLL1-207ENST00000507223 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.51□□□□□ -1.21
HMGCLL1-207ENST00000507223 ZBTB42B2RXF5 422 aa7.5□□□□□ -1.21
HMGCLL1-207ENST00000507223 HOXD8P13378 290 aaPredicted RBP7.5□□□□□ -1.21
HMGCLL1-207ENST00000507223 EPB42P16452 691 aa7.5□□□□□ -1.21
HMGCLL1-207ENST00000507223 BRD2P25440 801 aaKnown RBP7.5□□□□□ -1.21
HMGCLL1-207ENST00000507223 HELQQ8TDG4 1101 aa7.5□□□□□ -1.21
HMGCLL1-207ENST00000507223 PNMA5Q96PV4 448 aa7.5□□□□□ -1.21
HMGCLL1-207ENST00000507223 STIM2Q9P246 746 aa7.5□□□□□ -1.21
HMGCLL1-207ENST00000507223 USTQ9Y2C2 406 aa7.5□□□□□ -1.21
HMGCLL1-207ENST00000507223 NPR3P17342 541 aa7.49□□□□□ -1.21
HMGCLL1-207ENST00000507223 TARSP26639 723 aaKnown RBP7.49□□□□□ -1.21
HMGCLL1-207ENST00000507223 GRIK5Q16478 980 aa7.49□□□□□ -1.21
HMGCLL1-207ENST00000507223 FAM35AQ86V20 835 aa7.49□□□□□ -1.21
HMGCLL1-207ENST00000507223 TRPM4Q8TD43 1214 aa7.49□□□□□ -1.21
HMGCLL1-207ENST00000507223 PAX4O43316 350 aa7.48□□□□□ -1.21
HMGCLL1-207ENST00000507223 CPB1P15086 417 aa7.48□□□□□ -1.21
HMGCLL1-207ENST00000507223 IGF2-ASQ6U949 168 aa7.48□□□□□ -1.21
HMGCLL1-207ENST00000507223 RGL4Q8IZJ4 473 aa7.48□□□□□ -1.21
HMGCLL1-207ENST00000507223 LPIN3Q9BQK8 851 aa7.48□□□□□ -1.21
HMGCLL1-207ENST00000507223 XYLBO75191 536 aa7.47□□□□□ -1.21
HMGCLL1-207ENST00000507223 SASH3O75995 380 aa7.47□□□□□ -1.21
HMGCLL1-207ENST00000507223 ZAP70P43403 619 aa7.47□□□□□ -1.21
HMGCLL1-207ENST00000507223 PLAURQ03405 335 aa7.47□□□□□ -1.21
HMGCLL1-207ENST00000507223 SSTR4P31391 388 aa7.46□□□□□ -1.22
HMGCLL1-207ENST00000507223 GPLD1P80108 840 aa7.46□□□□□ -1.22
HMGCLL1-207ENST00000507223 PERM1Q5SV97 790 aa7.46□□□□□ -1.22
HMGCLL1-207ENST00000507223 DHX32Q7L7V1 743 aaKnown RBP7.46□□□□□ -1.22
HMGCLL1-207ENST00000507223 GTF3C2Q8WUA4 911 aaPredicted RBP7.46□□□□□ -1.22
HMGCLL1-207ENST00000507223 FRRS1LQ9P0K9 344 aa7.46□□□□□ -1.22
HMGCLL1-207ENST00000507223 DEAF1O75398 565 aaPredicted RBP7.45□□□□□ -1.22
HMGCLL1-207ENST00000507223 TXKP42681 527 aa7.45□□□□□ -1.22
HMGCLL1-207ENST00000507223 ECM1Q16610 540 aa7.45□□□□□ -1.22
HMGCLL1-207ENST00000507223 KRT25Q7Z3Z0 450 aa7.45□□□□□ -1.22
HMGCLL1-207ENST00000507223 WFDC8Q8IUA0 241 aa7.45□□□□□ -1.22
HMGCLL1-207ENST00000507223 DZIP1LQ8IYY4 767 aaKnown RBP7.45□□□□□ -1.22
HMGCLL1-207ENST00000507223 FMNL2Q96PY5 1086 aa7.45□□□□□ -1.22
HMGCLL1-207ENST00000507223 TLR7Q9NYK1 1049 aaKnown RBP7.45□□□□□ -1.22
HMGCLL1-207ENST00000507223 MMP20O60882 483 aa7.44□□□□□ -1.22
HMGCLL1-207ENST00000507223 FSTP19883 344 aa7.44□□□□□ -1.22
HMGCLL1-207ENST00000507223 SOX18P35713 384 aa7.44□□□□□ -1.22
HMGCLL1-207ENST00000507223 CD97P48960 835 aa7.44□□□□□ -1.22
HMGCLL1-207ENST00000507223 NRLP54845 237 aa7.44□□□□□ -1.22
HMGCLL1-207ENST00000507223 PCSK7Q16549 785 aa7.44□□□□□ -1.22
HMGCLL1-207ENST00000507223 ATCAYQ86WG3 371 aa7.44□□□□□ -1.22
HMGCLL1-207ENST00000507223 CMTR1Q8N1G2 835 aaKnown RBP7.44□□□□□ -1.22
HMGCLL1-207ENST00000507223 ABTB2Q8N961 1025 aa7.44□□□□□ -1.22
HMGCLL1-207ENST00000507223 RETREG2Q8NC44 543 aa7.44□□□□□ -1.22
HMGCLL1-207ENST00000507223 SCRIBQ14160 1630 aa7.43□□□□□ -1.22
HMGCLL1-207ENST00000507223 RARAP10276 462 aa7.43□□□□□ -1.22
HMGCLL1-207ENST00000507223 MTMR3Q13615 1198 aa7.43□□□□□ -1.22
HMGCLL1-207ENST00000507223 ELMSAN1Q6PJG2 1045 aa7.43□□□□□ -1.22
HMGCLL1-207ENST00000507223 SLC51AQ86UW1 340 aa7.43□□□□□ -1.22
HMGCLL1-207ENST00000507223 ARID3AQ99856 593 aa7.43□□□□□ -1.22
HMGCLL1-207ENST00000507223 AKTIPQ9H8T0 292 aa7.43□□□□□ -1.22
HMGCLL1-207ENST00000507223 DLL1O00548 723 aa7.42□□□□□ -1.22
HMGCLL1-207ENST00000507223 COBLO75128 1261 aa7.42□□□□□ -1.22
HMGCLL1-207ENST00000507223 ALX3O95076 343 aa7.42□□□□□ -1.22
HMGCLL1-207ENST00000507223 MPSTP25325 297 aa7.42□□□□□ -1.22
HMGCLL1-207ENST00000507223 NLRP13Q86W25 1043 aa7.42□□□□□ -1.22
HMGCLL1-207ENST00000507223 GPR152Q8TDT2 470 aa7.42□□□□□ -1.22
HMGCLL1-207ENST00000507223 TTC9Q92623 222 aa7.42□□□□□ -1.22
HMGCLL1-207ENST00000507223 EIF1AXP47813 144 aaKnown RBP7.41□□□□□ -1.22
HMGCLL1-207ENST00000507223 IRAK1P51617 712 aa7.41□□□□□ -1.22
HMGCLL1-207ENST00000507223 MLLT1Q03111 559 aaPredicted RBP7.41□□□□□ -1.22
HMGCLL1-207ENST00000507223 OR13H1Q8NG92 308 aa7.41□□□□□ -1.22
HMGCLL1-207ENST00000507223 PIK3R5Q8WYR1 880 aa7.41□□□□□ -1.22
HMGCLL1-207ENST00000507223 MED26O95402 600 aa7.4□□□□□ -1.22
HMGCLL1-207ENST00000507223 PDGFAP04085 211 aa7.4□□□□□ -1.22
HMGCLL1-207ENST00000507223 YBX3P16989 372 aaKnown RBP eCLIP7.4□□□□□ -1.22
HMGCLL1-207ENST00000507223 COL13A1Q5TAT6 717 aaPredicted RBP7.4□□□□□ -1.22
HMGCLL1-207ENST00000507223 XKR5Q6UX68 686 aa7.4□□□□□ -1.22
HMGCLL1-207ENST00000507223 TXNDC2Q86VQ3 553 aa7.4□□□□□ -1.22
HMGCLL1-207ENST00000507223 SMG9Q9H0W8 520 aaKnown RBP7.4□□□□□ -1.22
HMGCLL1-207ENST00000507223 UBAP1LF5GYI3 381 aa7.39□□□□□ -1.23
HMGCLL1-207ENST00000507223 FZD6O60353 706 aa7.39□□□□□ -1.23
HMGCLL1-207ENST00000507223 TAL1P17542 331 aaPredicted RBP7.39□□□□□ -1.23
HMGCLL1-207ENST00000507223 NOM1Q5C9Z4 860 aaKnown RBP7.39□□□□□ -1.23
HMGCLL1-207ENST00000507223 TMEM130Q8N3G9 435 aa7.39□□□□□ -1.23
HMGCLL1-207ENST00000507223 NUDT16Q96DE0 195 aaKnown RBP7.39□□□□□ -1.23
HMGCLL1-207ENST00000507223 GGNBP2Q9H3C7 697 aa7.39□□□□□ -1.23
HMGCLL1-207ENST00000507223 FAM13BQ9NYF5 915 aa7.39□□□□□ -1.23
HMGCLL1-207ENST00000507223 EGFL7Q9UHF1 273 aa7.39□□□□□ -1.23
HMGCLL1-207ENST00000507223 OAS3Q9Y6K5 1087 aaKnown RBP7.39□□□□□ -1.23
HMGCLL1-207ENST00000507223 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.39□□□□□ -1.23
HMGCLL1-207ENST00000507223 F8W735 103 aaPredicted RBP7.38□□□□□ -1.23
HMGCLL1-207ENST00000507223 KIF4AO95239 1232 aa7.38□□□□□ -1.23
HMGCLL1-207ENST00000507223 HFE2Q6ZVN8 426 aa7.38□□□□□ -1.23
HMGCLL1-207ENST00000507223 MRPL18Q9H0U6 180 aaKnown RBP7.38□□□□□ -1.23
HMGCLL1-207ENST00000507223 TMEM63CQ9P1W3 806 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms