RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 USP19O94966 1318 aa9.77□□□□□ -0.85
NR1I3-224ENST00000507215 LMO7Q8WWI1 1683 aa9.77□□□□□ -0.85
NR1I3-224ENST00000507215 NRKQ7Z2Y5 1582 aa9.76□□□□□ -0.85
NR1I3-224ENST00000507215 CRB1P82279 1406 aa9.76□□□□□ -0.85
NR1I3-224ENST00000507215 ATP5J2-PTCD1G3V325 749 aa9.76□□□□□ -0.85
NR1I3-224ENST00000507215 MYCP01106 439 aaPredicted RBP9.76□□□□□ -0.85
NR1I3-224ENST00000507215 RFX1P22670 979 aa9.76□□□□□ -0.85
NR1I3-224ENST00000507215 ZC3H6P61129 1189 aaKnown RBP9.76□□□□□ -0.85
NR1I3-224ENST00000507215 EML3Q32P44 896 aa9.76□□□□□ -0.85
NR1I3-224ENST00000507215 ABTB2Q8N961 1025 aa9.76□□□□□ -0.85
NR1I3-224ENST00000507215 TSEN34Q9BSV6 310 aaKnown RBP9.76□□□□□ -0.85
NR1I3-224ENST00000507215 RAB6BQ9NRW1 208 aa9.76□□□□□ -0.85
NR1I3-224ENST00000507215 CAMTA1Q9Y6Y1 1673 aa9.76□□□□□ -0.85
NR1I3-224ENST00000507215 COL5A2P05997 1499 aaPredicted RBP9.75□□□□□ -0.85
NR1I3-224ENST00000507215 ZBTB7BO15156 539 aaPredicted RBP9.75□□□□□ -0.85
NR1I3-224ENST00000507215 SPINT1O43278 529 aa9.75□□□□□ -0.85
NR1I3-224ENST00000507215 SRPK2P78362 688 aaKnown RBP9.75□□□□□ -0.85
NR1I3-224ENST00000507215 LARP1Q6PKG0 1096 aaKnown RBP9.75□□□□□ -0.85
NR1I3-224ENST00000507215 INSM2Q96T92 566 aaPredicted RBP9.75□□□□□ -0.85
NR1I3-224ENST00000507215 MKRN1Q9UHC7 482 aaKnown RBP9.75□□□□□ -0.85
NR1I3-224ENST00000507215 KIAA1024Q9UPX6 916 aa9.75□□□□□ -0.85
NR1I3-224ENST00000507215 AATKQ6ZMQ8 1374 aa9.75□□□□□ -0.85
NR1I3-224ENST00000507215 TOPAZ1Q8N9V7 1692 aa9.74□□□□□ -0.85
NR1I3-224ENST00000507215 CHD4Q14839 1912 aa9.74□□□□□ -0.85
NR1I3-224ENST00000507215 ARHGEF28Q8N1W1 1705 aaKnown RBP9.74□□□□□ -0.85
NR1I3-224ENST00000507215 CASZ1Q86V15 1759 aa9.74□□□□□ -0.85
NR1I3-224ENST00000507215 A0A1W2PRU2 124 aa9.74□□□□□ -0.85
NR1I3-224ENST00000507215 LZTS3O60299 673 aaPredicted RBP9.74□□□□□ -0.85
NR1I3-224ENST00000507215 BMP2P12643 396 aa9.74□□□□□ -0.85
NR1I3-224ENST00000507215 CTSOP43234 321 aaPredicted RBP9.74□□□□□ -0.85
NR1I3-224ENST00000507215 CLDN10P78369 228 aa9.74□□□□□ -0.85
NR1I3-224ENST00000507215 DDB1Q16531 1140 aa9.74□□□□□ -0.85
NR1I3-224ENST00000507215 ARHGEF10LQ9HCE6 1279 aa9.74□□□□□ -0.85
NR1I3-224ENST00000507215 NOD1Q9Y239 953 aa9.74□□□□□ -0.85
NR1I3-224ENST00000507215 UTRNP46939 3433 aa9.74□□□□□ -0.85
NR1I3-224ENST00000507215 ACEP12821 1306 aa9.74□□□□□ -0.85
NR1I3-224ENST00000507215 PEAK1Q9H792 1746 aa9.73□□□□□ -0.85
NR1I3-224ENST00000507215 IL2RAP01589 272 aa9.73□□□□□ -0.85
NR1I3-224ENST00000507215 GCP02774 474 aa9.73□□□□□ -0.85
NR1I3-224ENST00000507215 SNRPBP14678 240 aaKnown RBP9.73□□□□□ -0.85
NR1I3-224ENST00000507215 SCNN1DP51172 638 aa9.73□□□□□ -0.85
NR1I3-224ENST00000507215 GTF2IP78347 998 aa9.73□□□□□ -0.85
NR1I3-224ENST00000507215 CDCA8Q53HL2 280 aa9.73□□□□□ -0.85
NR1I3-224ENST00000507215 CYP2U1Q7Z449 544 aa9.73□□□□□ -0.85
NR1I3-224ENST00000507215 ETNK1Q9HBU6 452 aa9.73□□□□□ -0.85
NR1I3-224ENST00000507215 STK32BQ9NY57 414 aa9.73□□□□□ -0.85
NR1I3-224ENST00000507215 MAP3K5Q99683 1374 aa9.73□□□□□ -0.85
NR1I3-224ENST00000507215 SBF2Q86WG5 1849 aa9.72□□□□□ -0.85
NR1I3-224ENST00000507215 SOBPA7XYQ1 873 aa9.72□□□□□ -0.85
NR1I3-224ENST00000507215 SCARF1Q14162 830 aa9.72□□□□□ -0.85
NR1I3-224ENST00000507215 CCDC97Q96F63 343 aaPredicted RBP9.72□□□□□ -0.85
NR1I3-224ENST00000507215 CDK19Q9BWU1 502 aa9.72□□□□□ -0.85
NR1I3-224ENST00000507215 MTFR1LQ9H019 292 aa9.72□□□□□ -0.85
NR1I3-224ENST00000507215 SERPINA10Q9UK55 444 aa9.72□□□□□ -0.85
NR1I3-224ENST00000507215 LRRC37A3O60309 1634 aa9.71□□□□□ -0.85
NR1I3-224ENST00000507215 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.71□□□□□ -0.86
NR1I3-224ENST00000507215 TMEM229AB2RXF0 380 aa9.71□□□□□ -0.86
NR1I3-224ENST00000507215 DKK1O94907 266 aa9.71□□□□□ -0.86
NR1I3-224ENST00000507215 GNRH1P01148 92 aa9.71□□□□□ -0.86
NR1I3-224ENST00000507215 C1QTNF8P60827 252 aa9.71□□□□□ -0.86
NR1I3-224ENST00000507215 FOXD4L5Q5VV16 416 aaPredicted RBP9.71□□□□□ -0.86
NR1I3-224ENST00000507215 DCAF11Q8TEB1 546 aa9.71□□□□□ -0.86
NR1I3-224ENST00000507215 TRIM47Q96LD4 638 aa9.71□□□□□ -0.86
NR1I3-224ENST00000507215 HRH3Q9Y5N1 445 aa9.71□□□□□ -0.86
NR1I3-224ENST00000507215 KIAA1210Q9ULL0 1709 aa9.7□□□□□ -0.86
NR1I3-224ENST00000507215 SENP3-EIF4A1A0A087X0R7 540 aa9.7□□□□□ -0.86
NR1I3-224ENST00000507215 UPP2O95045 317 aa9.7□□□□□ -0.86
NR1I3-224ENST00000507215 CRTC2Q53ET0 693 aaPredicted RBP9.7□□□□□ -0.86
NR1I3-224ENST00000507215 NUTM2GQ5VZR2 741 aa9.7□□□□□ -0.86
NR1I3-224ENST00000507215 OGFOD1Q8N543 542 aa9.7□□□□□ -0.86
NR1I3-224ENST00000507215 AKAP12Q02952 1782 aa9.7□□□□□ -0.86
NR1I3-224ENST00000507215 MEN1O00255 615 aa9.69□□□□□ -0.86
NR1I3-224ENST00000507215 ABCC6O95255 1503 aa9.69□□□□□ -0.86
NR1I3-224ENST00000507215 MYOM1P52179 1685 aa9.69□□□□□ -0.86
NR1I3-224ENST00000507215 CLN3Q13286 438 aa9.69□□□□□ -0.86
NR1I3-224ENST00000507215 SLC15A2Q16348 729 aa9.69□□□□□ -0.86
NR1I3-224ENST00000507215 TOM1L2Q6ZVM7 507 aa9.69□□□□□ -0.86
NR1I3-224ENST00000507215 WDR17Q8IZU2 1322 aa9.69□□□□□ -0.86
NR1I3-224ENST00000507215 XAGE2Q96GT9 111 aa9.69□□□□□ -0.86
NR1I3-224ENST00000507215 SYT17Q9BSW7 474 aa9.69□□□□□ -0.86
NR1I3-224ENST00000507215 DNMT3LQ9UJW3 386 aa9.69□□□□□ -0.86
NR1I3-224ENST00000507215 SLIT3O75094 1523 aa9.68□□□□□ -0.86
NR1I3-224ENST00000507215 PPIP5K1Q6PFW1 1433 aa9.68□□□□□ -0.86
NR1I3-224ENST00000507215 FIGNL2A6NMB9 653 aa9.68□□□□□ -0.86
NR1I3-224ENST00000507215 ZBTB7AO95365 584 aa9.68□□□□□ -0.86
NR1I3-224ENST00000507215 GDF10P55107 478 aa9.68□□□□□ -0.86
NR1I3-224ENST00000507215 TXNRD1Q16881 649 aa9.68□□□□□ -0.86
NR1I3-224ENST00000507215 KCNH5Q8NCM2 988 aa9.68□□□□□ -0.86
NR1I3-224ENST00000507215 CNKSR1Q969H4 720 aa9.68□□□□□ -0.86
NR1I3-224ENST00000507215 ARID3AQ99856 593 aa9.68□□□□□ -0.86
NR1I3-224ENST00000507215 FHDC1Q9C0D6 1143 aaPredicted RBP9.68□□□□□ -0.86
NR1I3-224ENST00000507215 POLMQ9NP87 494 aaPredicted RBP9.68□□□□□ -0.86
NR1I3-224ENST00000507215 WNK3Q9BYP7 1800 aa9.68□□□□□ -0.86
NR1I3-224ENST00000507215 CCDC7Q96M83 1385 aa9.67□□□□□ -0.86
NR1I3-224ENST00000507215 TTLL8A6PVC2 850 aa9.67□□□□□ -0.86
NR1I3-224ENST00000507215 EXOC5O00471 708 aa9.67□□□□□ -0.86
NR1I3-224ENST00000507215 RASA1P20936 1047 aa9.67□□□□□ -0.86
NR1I3-224ENST00000507215 HMGB2P26583 209 aaKnown RBP9.67□□□□□ -0.86
NR1I3-224ENST00000507215 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.67□□□□□ -0.86
NR1I3-224ENST00000507215 RNF217Q8TC41 542 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms