RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 GRIK1P39086 918 aa6.11□□□□□ -1.43
TRAPPC13-208ENST00000505553 PSMA6P60900 246 aaKnown RBP6.11□□□□□ -1.43
TRAPPC13-208ENST00000505553 OCLNQ16625 522 aa6.11□□□□□ -1.43
TRAPPC13-208ENST00000505553 NOM1Q5C9Z4 860 aaKnown RBP6.11□□□□□ -1.43
TRAPPC13-208ENST00000505553 INTS5Q6P9B9 1019 aaKnown RBP6.11□□□□□ -1.43
TRAPPC13-208ENST00000505553 NPAS4Q8IUM7 802 aa6.11□□□□□ -1.43
TRAPPC13-208ENST00000505553 ZSCAN29Q8IWY8 852 aaPredicted RBP6.11□□□□□ -1.43
TRAPPC13-208ENST00000505553 DZIP1LQ8IYY4 767 aaKnown RBP6.11□□□□□ -1.43
TRAPPC13-208ENST00000505553 PRIMPOLQ96LW4 560 aa6.11□□□□□ -1.43
TRAPPC13-208ENST00000505553 TUT1Q9H6E5 874 aaKnown RBP6.11□□□□□ -1.43
TRAPPC13-208ENST00000505553 KIAA1024Q9UPX6 916 aa6.11□□□□□ -1.43
TRAPPC13-208ENST00000505553 C21orf2O43822 256 aa6.1□□□□□ -1.43
TRAPPC13-208ENST00000505553 TCF3P15923 654 aa6.1□□□□□ -1.43
TRAPPC13-208ENST00000505553 VAMP1P23763 118 aa6.1□□□□□ -1.43
TRAPPC13-208ENST00000505553 SF3B2Q13435 895 aaKnown RBP6.1□□□□□ -1.43
TRAPPC13-208ENST00000505553 PCSK7Q16549 785 aa6.1□□□□□ -1.43
TRAPPC13-208ENST00000505553 HINFPQ9BQA5 517 aa6.1□□□□□ -1.43
TRAPPC13-208ENST00000505553 AKTIPQ9H8T0 292 aa6.1□□□□□ -1.43
TRAPPC13-208ENST00000505553 SFI1A8K8P3 1242 aa6.09□□□□□ -1.43
TRAPPC13-208ENST00000505553 M0R2N6 131 aa6.09□□□□□ -1.43
TRAPPC13-208ENST00000505553 MED26O95402 600 aa6.09□□□□□ -1.43
TRAPPC13-208ENST00000505553 IGLV1-40P01703 118 aa6.09□□□□□ -1.43
TRAPPC13-208ENST00000505553 MAPK1P28482 360 aa6.09□□□□□ -1.43
TRAPPC13-208ENST00000505553 SCNN1AP37088 669 aa6.09□□□□□ -1.43
TRAPPC13-208ENST00000505553 FKBP4Q02790 459 aaKnown RBP eCLIP6.09□□□□□ -1.43
TRAPPC13-208ENST00000505553 COL19A1Q14993 1142 aa6.09□□□□□ -1.43
TRAPPC13-208ENST00000505553 C1orf53Q5VUE5 145 aa6.09□□□□□ -1.43
TRAPPC13-208ENST00000505553 WFDC8Q8IUA0 241 aa6.09□□□□□ -1.43
TRAPPC13-208ENST00000505553 C7orf43Q8WVR3 580 aa6.09□□□□□ -1.43
TRAPPC13-208ENST00000505553 DNAJB12Q9NXW2 375 aaKnown RBP6.09□□□□□ -1.43
TRAPPC13-208ENST00000505553 DCTN4Q9UJW0 460 aa6.09□□□□□ -1.43
TRAPPC13-208ENST00000505553 HCN4Q9Y3Q4 1203 aa6.09□□□□□ -1.43
TRAPPC13-208ENST00000505553 ZNF211Q13398 564 aaPredicted RBP6.08□□□□□ -1.44
TRAPPC13-208ENST00000505553 GTF3C2Q8WUA4 911 aaPredicted RBP6.08□□□□□ -1.44
TRAPPC13-208ENST00000505553 ASB16Q96NS5 453 aa6.08□□□□□ -1.44
TRAPPC13-208ENST00000505553 TSPAN10Q9H1Z9 355 aaPredicted RBP6.08□□□□□ -1.44
TRAPPC13-208ENST00000505553 PPP1R12BO60237 982 aaPredicted RBP6.08□□□□□ -1.44
TRAPPC13-208ENST00000505553 TGFB1P01137 390 aa6.08□□□□□ -1.44
TRAPPC13-208ENST00000505553 TYRO3Q06418 890 aa6.08□□□□□ -1.44
TRAPPC13-208ENST00000505553 SH3PXD2AQ5TCZ1 1133 aa6.08□□□□□ -1.44
TRAPPC13-208ENST00000505553 PNMA5Q96PV4 448 aa6.08□□□□□ -1.44
TRAPPC13-208ENST00000505553 PHACTR1Q9C0D0 580 aa6.08□□□□□ -1.44
TRAPPC13-208ENST00000505553 FRRS1LQ9P0K9 344 aa6.08□□□□□ -1.44
TRAPPC13-208ENST00000505553 RAXQ9Y2V3 346 aa6.08□□□□□ -1.44
TRAPPC13-208ENST00000505553 WNT11O96014 354 aa6.07□□□□□ -1.44
TRAPPC13-208ENST00000505553 HIRAP54198 1017 aaPredicted RBP6.07□□□□□ -1.44
TRAPPC13-208ENST00000505553 TSEN2Q8NCE0 465 aaKnown RBP6.07□□□□□ -1.44
TRAPPC13-208ENST00000505553 COL26A1Q96A83 441 aa6.07□□□□□ -1.44
TRAPPC13-208ENST00000505553 MRPL18Q9H0U6 180 aaKnown RBP6.07□□□□□ -1.44
TRAPPC13-208ENST00000505553 ANO2Q9NQ90 1003 aa6.07□□□□□ -1.44
TRAPPC13-208ENST00000505553 NAGPAQ9UK23 515 aa6.07□□□□□ -1.44
TRAPPC13-208ENST00000505553 HMGB1P09429 215 aaKnown RBP6.06□□□□□ -1.44
TRAPPC13-208ENST00000505553 SPINK2P20155 84 aa6.06□□□□□ -1.44
TRAPPC13-208ENST00000505553 WEE1P30291 646 aa6.06□□□□□ -1.44
TRAPPC13-208ENST00000505553 FAM35AQ86V20 835 aa6.06□□□□□ -1.44
TRAPPC13-208ENST00000505553 TMEM130Q8N3G9 435 aa6.06□□□□□ -1.44
TRAPPC13-208ENST00000505553 DCAF11Q8TEB1 546 aa6.06□□□□□ -1.44
TRAPPC13-208ENST00000505553 STOML1Q9UBI4 398 aa6.06□□□□□ -1.44
TRAPPC13-208ENST00000505553 ATAD2Q6PL18 1390 aa6.06□□□□□ -1.44
TRAPPC13-208ENST00000505553 HIF1AQ16665 826 aa6.05□□□□□ -1.44
TRAPPC13-208ENST00000505553 EAPPQ56P03 285 aaPredicted RBP6.05□□□□□ -1.44
TRAPPC13-208ENST00000505553 FBXO33Q7Z6M2 555 aa6.05□□□□□ -1.44
TRAPPC13-208ENST00000505553 GAS2L2Q8NHY3 880 aa6.05□□□□□ -1.44
TRAPPC13-208ENST00000505553 HSH2DQ96JZ2 352 aa6.05□□□□□ -1.44
TRAPPC13-208ENST00000505553 SUSD3Q96L08 255 aa6.05□□□□□ -1.44
TRAPPC13-208ENST00000505553 C8orf37Q96NL8 207 aa6.05□□□□□ -1.44
TRAPPC13-208ENST00000505553 DLL1O00548 723 aa6.04□□□□□ -1.44
TRAPPC13-208ENST00000505553 FAM13AO94988 1023 aa6.04□□□□□ -1.44
TRAPPC13-208ENST00000505553 RGL4Q8IZJ4 473 aa6.04□□□□□ -1.44
TRAPPC13-208ENST00000505553 CHMP7Q8WUX9 453 aaPredicted RBP6.04□□□□□ -1.44
TRAPPC13-208ENST00000505553 SCG3Q8WXD2 468 aaKnown RBP6.04□□□□□ -1.44
TRAPPC13-208ENST00000505553 MKNK1Q9BUB5 465 aa6.04□□□□□ -1.44
TRAPPC13-208ENST00000505553 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.04□□□□□ -1.442e-6■■■■■ 149.1
TRAPPC13-208ENST00000505553 SEPT3Q9UH03 358 aa6.04□□□□□ -1.44
TRAPPC13-208ENST00000505553 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.04□□□□□ -1.44
TRAPPC13-208ENST00000505553 FOXO3O43524 673 aa6.03□□□□□ -1.44
TRAPPC13-208ENST00000505553 CPB1P15086 417 aa6.03□□□□□ -1.44
TRAPPC13-208ENST00000505553 IGFBP4P22692 258 aa6.03□□□□□ -1.44
TRAPPC13-208ENST00000505553 ITGAEP38570 1179 aa6.03□□□□□ -1.44
TRAPPC13-208ENST00000505553 ARHGAP4P98171 946 aa6.03□□□□□ -1.44
TRAPPC13-208ENST00000505553 FGD1P98174 961 aa6.03□□□□□ -1.44
TRAPPC13-208ENST00000505553 FKBP5Q13451 457 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC13-208ENST00000505553 OGFOD2Q6N063 350 aa6.03□□□□□ -1.44
TRAPPC13-208ENST00000505553 ELMSAN1Q6PJG2 1045 aa6.03□□□□□ -1.44
TRAPPC13-208ENST00000505553 POTEAQ6S8J7 498 aa6.03□□□□□ -1.44
TRAPPC13-208ENST00000505553 DTX1Q86Y01 620 aa6.03□□□□□ -1.44
TRAPPC13-208ENST00000505553 ALDH16A1Q8IZ83 802 aa6.03□□□□□ -1.44
TRAPPC13-208ENST00000505553 STAG2Q8N3U4 1231 aa6.03□□□□□ -1.44
TRAPPC13-208ENST00000505553 HELQQ8TDG4 1101 aa6.03□□□□□ -1.44
TRAPPC13-208ENST00000505553 TTC9Q92623 222 aa6.03□□□□□ -1.44
TRAPPC13-208ENST00000505553 ADGRE2Q9UHX3 823 aa6.03□□□□□ -1.44
TRAPPC13-208ENST00000505553 F8W735 103 aaPredicted RBP6.02□□□□□ -1.45
TRAPPC13-208ENST00000505553 GRIK5Q16478 980 aa6.02□□□□□ -1.45
TRAPPC13-208ENST00000505553 ECM1Q16610 540 aa6.02□□□□□ -1.45
TRAPPC13-208ENST00000505553 ZDHHC13Q8IUH4 622 aa6.02□□□□□ -1.45
TRAPPC13-208ENST00000505553 ZNF280CQ8ND82 737 aa6.02□□□□□ -1.45
TRAPPC13-208ENST00000505553 VTI1AQ96AJ9 217 aa6.02□□□□□ -1.45
TRAPPC13-208ENST00000505553 NGLY1Q96IV0 654 aa6.02□□□□□ -1.45
TRAPPC13-208ENST00000505553 DRC1Q96MC2 740 aa6.02□□□□□ -1.45
TRAPPC13-208ENST00000505553 LPIN3Q9BQK8 851 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms