RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 HOXA10P31260 410 aaPredicted RBP5.9□□□□□ -1.46
CPNE4-204ENST00000505331 KIAA2012Q0VF49 1180 aa5.9□□□□□ -1.46
CPNE4-204ENST00000505331 CRHR2Q13324 411 aa5.9□□□□□ -1.46
CPNE4-204ENST00000505331 TTLL12Q14166 644 aaPredicted RBP5.9□□□□□ -1.46
CPNE4-204ENST00000505331 KIF4BQ2VIQ3 1234 aa5.9□□□□□ -1.46
CPNE4-204ENST00000505331 ZNF697Q5TEC3 545 aa5.9□□□□□ -1.46
CPNE4-204ENST00000505331 SPRYD7Q5W111 196 aa5.9□□□□□ -1.46
CPNE4-204ENST00000505331 OTUD7BQ6GQQ9 843 aa5.9□□□□□ -1.46
CPNE4-204ENST00000505331 RPGRQ92834 1020 aaKnown RBP5.9□□□□□ -1.46
CPNE4-204ENST00000505331 FAM161BQ96MY7 647 aa5.9□□□□□ -1.46
CPNE4-204ENST00000505331 CDX2Q99626 313 aaPredicted RBP5.9□□□□□ -1.46
CPNE4-204ENST00000505331 SLC52A2Q9HAB3 445 aa5.9□□□□□ -1.46
CPNE4-204ENST00000505331 ZNF652Q9Y2D9 606 aa5.9□□□□□ -1.46
CPNE4-204ENST00000505331 CACNA1AO00555 2505 aa5.9□□□□□ -1.47
CPNE4-204ENST00000505331 IGF2BP3O00425 579 aaKnown RBP eCLIP5.89□□□□□ -1.47
CPNE4-204ENST00000505331 CAPN2P17655 700 aa5.89□□□□□ -1.47
CPNE4-204ENST00000505331 GTF2E1P29083 439 aaPredicted RBP5.89□□□□□ -1.47
CPNE4-204ENST00000505331 CAP1Q01518 475 aa5.89□□□□□ -1.47
CPNE4-204ENST00000505331 SLC39A6Q13433 755 aa5.89□□□□□ -1.47
CPNE4-204ENST00000505331 ANGEL2Q5VTE6 544 aaKnown RBP5.89□□□□□ -1.47
CPNE4-204ENST00000505331 DZIP3Q86Y13 1208 aaKnown RBP5.89□□□□□ -1.47
CPNE4-204ENST00000505331 CRAMP1Q96RY5 1269 aa5.89□□□□□ -1.47
CPNE4-204ENST00000505331 TEX13AQ9BXU3 409 aaPredicted RBP5.89□□□□□ -1.47
CPNE4-204ENST00000505331 YDJCA8MPS7 323 aa5.88□□□□□ -1.47
CPNE4-204ENST00000505331 TCERG1O14776 1098 aaKnown RBP5.88□□□□□ -1.47
CPNE4-204ENST00000505331 RGL2O15211 777 aa5.88□□□□□ -1.47
CPNE4-204ENST00000505331 NF2P35240 595 aa5.88□□□□□ -1.47
CPNE4-204ENST00000505331 MAGEA10P43363 369 aaPredicted RBP5.88□□□□□ -1.47
CPNE4-204ENST00000505331 MRE11P49959 708 aa5.88□□□□□ -1.47
CPNE4-204ENST00000505331 PRMT2P55345 433 aa5.88□□□□□ -1.47
CPNE4-204ENST00000505331 FOXK2Q01167 660 aa5.88□□□□□ -1.47
CPNE4-204ENST00000505331 MTFR1Q15390 333 aa5.88□□□□□ -1.47
CPNE4-204ENST00000505331 NECTIN2Q92692 538 aa5.88□□□□□ -1.47
CPNE4-204ENST00000505331 RBM17Q96I25 401 aaKnown RBP5.88□□□□□ -1.47
CPNE4-204ENST00000505331 ZNF496Q96IT1 587 aaPredicted RBP5.88□□□□□ -1.47
CPNE4-204ENST00000505331 PHF12Q96QT6 1004 aa5.88□□□□□ -1.47
CPNE4-204ENST00000505331 UBE2OQ9C0C9 1292 aaKnown RBP5.88□□□□□ -1.47
CPNE4-204ENST00000505331 ATP6V0A2Q9Y487 856 aa5.88□□□□□ -1.47
CPNE4-204ENST00000505331 LAMB4A4D0S4 1761 aa5.88□□□□□ -1.47
CPNE4-204ENST00000505331 CACNA1SQ13698 1873 aa5.88□□□□□ -1.47
CPNE4-204ENST00000505331 PSMD14O00487 310 aa5.87□□□□□ -1.47
CPNE4-204ENST00000505331 GNRH1P01148 92 aa5.87□□□□□ -1.47
CPNE4-204ENST00000505331 ZBTB48P10074 688 aaPredicted RBP5.87□□□□□ -1.47
CPNE4-204ENST00000505331 PTPN12Q05209 780 aaKnown RBP5.87□□□□□ -1.47
CPNE4-204ENST00000505331 SCARF1Q14162 830 aa5.87□□□□□ -1.47
CPNE4-204ENST00000505331 DPP8Q6V1X1 898 aaPredicted RBP5.87□□□□□ -1.47
CPNE4-204ENST00000505331 ARMC9Q7Z3E5 817 aa5.87□□□□□ -1.47
CPNE4-204ENST00000505331 NIP7Q9Y221 180 aaKnown RBP eCLIP5.87□□□□□ -1.47
CPNE4-204ENST00000505331 ASTN2O75129 1339 aaPredicted RBP5.87□□□□□ -1.47
CPNE4-204ENST00000505331 ROCK2O75116 1388 aaKnown RBP5.87□□□□□ -1.47
CPNE4-204ENST00000505331 SCN7AQ01118 1682 aa5.87□□□□□ -1.47
CPNE4-204ENST00000505331 ANKRD26Q9UPS8 1709 aa5.87□□□□□ -1.47
CPNE4-204ENST00000505331 RIC1Q4ADV7 1423 aa5.86□□□□□ -1.47
CPNE4-204ENST00000505331 FAM205AQ6ZU69 1335 aa5.86□□□□□ -1.47
CPNE4-204ENST00000505331 FAM177BA6PVY3 158 aa5.86□□□□□ -1.47
CPNE4-204ENST00000505331 CCL5P13501 91 aa5.86□□□□□ -1.47
CPNE4-204ENST00000505331 EIF4A2Q14240 407 aaKnown RBP5.86□□□□□ -1.47
CPNE4-204ENST00000505331 LDLRAD1Q5T700 205 aa5.86□□□□□ -1.47
CPNE4-204ENST00000505331 SLC51AQ86UW1 340 aa5.86□□□□□ -1.47
CPNE4-204ENST00000505331 ADAMTS19Q8TE59 1207 aa5.86□□□□□ -1.47
CPNE4-204ENST00000505331 U2AF1L4Q8WU68 220 aaKnown RBP5.86□□□□□ -1.47
CPNE4-204ENST00000505331 ATXN2LQ8WWM7 1075 aaKnown RBP5.86□□□□□ -1.47
CPNE4-204ENST00000505331 SLC10A4Q96EP9 437 aa5.86□□□□□ -1.47
CPNE4-204ENST00000505331 UHRF1Q96T88 793 aaPredicted RBP5.86□□□□□ -1.47
CPNE4-204ENST00000505331 LRFN3Q9BTN0 628 aa5.86□□□□□ -1.47
CPNE4-204ENST00000505331 NYXQ9GZU5 481 aa5.86□□□□□ -1.47
CPNE4-204ENST00000505331 RNF208Q9H0X6 261 aa5.86□□□□□ -1.47
CPNE4-204ENST00000505331 ZMYND8Q9ULU4 1186 aaPredicted RBP5.86□□□□□ -1.47
CPNE4-204ENST00000505331 EYSQ5T1H1 3165 aa5.85□□□□□ -1.47
CPNE4-204ENST00000505331 SGPL1O95470 568 aa5.85□□□□□ -1.47
CPNE4-204ENST00000505331 FOSL2P15408 326 aa5.85□□□□□ -1.47
CPNE4-204ENST00000505331 ZNF280AP59817 542 aaPredicted RBP5.85□□□□□ -1.47
CPNE4-204ENST00000505331 KIF22Q14807 665 aa5.85□□□□□ -1.47
CPNE4-204ENST00000505331 NUTM1Q86Y26 1132 aa5.85□□□□□ -1.47
CPNE4-204ENST00000505331 C7orf61Q8IZ16 206 aa5.85□□□□□ -1.47
CPNE4-204ENST00000505331 TTC5Q8N0Z6 440 aa5.85□□□□□ -1.47
CPNE4-204ENST00000505331 MYLIPQ8WY64 445 aa5.85□□□□□ -1.47
CPNE4-204ENST00000505331 ASB2Q96Q27 587 aa5.85□□□□□ -1.47
CPNE4-204ENST00000505331 SEMA6BQ9H3T3 888 aa5.85□□□□□ -1.47
CPNE4-204ENST00000505331 KIAA0100Q14667 2235 aaKnown RBP5.84□□□□□ -1.47
CPNE4-204ENST00000505331 CEP290O15078 2479 aa5.84□□□□□ -1.47
CPNE4-204ENST00000505331 TESPA1A2RU30 521 aaPredicted RBP5.84□□□□□ -1.47
CPNE4-204ENST00000505331 ECM2O94769 699 aaPredicted RBP5.84□□□□□ -1.47
CPNE4-204ENST00000505331 A1BGP04217 495 aa5.84□□□□□ -1.47
CPNE4-204ENST00000505331 GRK4P32298 578 aa5.84□□□□□ -1.47
CPNE4-204ENST00000505331 TNNT2P45379 298 aaPredicted RBP5.84□□□□□ -1.47
CPNE4-204ENST00000505331 UBXN2AP68543 259 aa5.84□□□□□ -1.47
CPNE4-204ENST00000505331 TMEM31Q5JXX7 168 aa5.84□□□□□ -1.47
CPNE4-204ENST00000505331 PRAMEF18Q5VWM3 479 aa5.84□□□□□ -1.47
CPNE4-204ENST00000505331 NECAB2Q7Z6G3 386 aa5.84□□□□□ -1.47
CPNE4-204ENST00000505331 SP8Q8IXZ3 490 aa5.84□□□□□ -1.47
CPNE4-204ENST00000505331 ZFYVE28Q9HCC9 887 aa5.84□□□□□ -1.47
CPNE4-204ENST00000505331 PRUNE2Q8WUY3 3088 aa5.83□□□□□ -1.48
CPNE4-204ENST00000505331 ABCC12Q96J65 1359 aa5.83□□□□□ -1.48
CPNE4-204ENST00000505331 HEG1Q9ULI3 1381 aa5.83□□□□□ -1.48
CPNE4-204ENST00000505331 UNCXA6NJT0 531 aa5.83□□□□□ -1.48
CPNE4-204ENST00000505331 BBOX1O75936 387 aa5.83□□□□□ -1.48
CPNE4-204ENST00000505331 TFRCP02786 760 aaKnown RBP5.83□□□□□ -1.48
CPNE4-204ENST00000505331 SYN1P17600 705 aa5.83□□□□□ -1.48
CPNE4-204ENST00000505331 WNK4Q96J92 1243 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms