RNA–Protein interactions for RNA: ENST00000504880.5

SLC38A9-208, Transcript of solute carrier family 38 member 9, humanhuman

TSL 5

Gene SLC38A9, Length 2,040 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9-208ENST00000504880 CTSWP56202 376 aa27.39■■□□□ 1.98
SLC38A9-208ENST00000504880 LINC00116Q8NCU8 138 aa27.39■■□□□ 1.98
SLC38A9-208ENST00000504880 RPAP1Q9BWH6 1393 aaPredicted RBP27.38■■□□□ 1.97
SLC38A9-208ENST00000504880 LARGE1O95461 756 aa27.38■■□□□ 1.97
SLC38A9-208ENST00000504880 HSPA1LP34931 641 aa27.38■■□□□ 1.97
SLC38A9-208ENST00000504880 COL9A3Q14050 684 aaPredicted RBP27.38■■□□□ 1.97
SLC38A9-208ENST00000504880 KBTBD3Q8NAB2 608 aa27.38■■□□□ 1.97
SLC38A9-208ENST00000504880 TAF6LQ9Y6J9 622 aa27.38■■□□□ 1.97
SLC38A9-208ENST00000504880 DDX49Q9Y6V7 483 aaKnown RBP27.38■■□□□ 1.97
SLC38A9-208ENST00000504880 KLHL40Q2TBA0 621 aa27.37■■□□□ 1.97
SLC38A9-208ENST00000504880 SUSD4Q5VX71 490 aa27.37■■□□□ 1.97
SLC38A9-208ENST00000504880 SEC62Q99442 399 aaKnown RBP27.37■■□□□ 1.97
SLC38A9-208ENST00000504880 ZNF831Q5JPB2 1677 aa27.37■■□□□ 1.97
SLC38A9-208ENST00000504880 BTAF1O14981 1849 aa27.36■■□□□ 1.97
SLC38A9-208ENST00000504880 ITGA6P23229 1130 aa27.36■■□□□ 1.97
SLC38A9-208ENST00000504880 IFIT5Q13325 482 aaKnown RBP27.36■■□□□ 1.97
SLC38A9-208ENST00000504880 CCDC129Q6ZRS4 1044 aa27.36■■□□□ 1.97
SLC38A9-208ENST00000504880 SMARCC1Q92922 1105 aaPredicted RBP27.36■■□□□ 1.97
SLC38A9-208ENST00000504880 CEP126Q9P2H0 1117 aa27.36■■□□□ 1.97
SLC38A9-208ENST00000504880 BCORQ6W2J9 1755 aa27.36■■□□□ 1.97
SLC38A9-208ENST00000504880 FAM177BA6PVY3 158 aa27.36■■□□□ 1.97
SLC38A9-208ENST00000504880 GOLIM4O00461 696 aa27.36■■□□□ 1.97
SLC38A9-208ENST00000504880 SMIM5Q71RC9 77 aa27.36■■□□□ 1.97
SLC38A9-208ENST00000504880 PAG1Q9NWQ8 432 aa27.36■■□□□ 1.97
SLC38A9-208ENST00000504880 ADORA1P30542 326 aa27.34■■□□□ 1.97
SLC38A9-208ENST00000504880 RNF20Q5VTR2 975 aa27.34■■□□□ 1.97
SLC38A9-208ENST00000504880 FBXO3Q9UK99 471 aa27.34■■□□□ 1.97
SLC38A9-208ENST00000504880 USPL1Q5W0Q7 1092 aa27.34■■□□□ 1.97
SLC38A9-208ENST00000504880 DDX60Q8IY21 1712 aaKnown RBP27.34■■□□□ 1.97
SLC38A9-208ENST00000504880 NHSQ6T4R5 1651 aa27.33■■□□□ 1.97
SLC38A9-208ENST00000504880 XRCC6P12956 609 aaKnown RBP eCLIP27.33■■□□□ 1.97
SLC38A9-208ENST00000504880 MCMDC2Q4G0Z9 681 aa27.33■■□□□ 1.97
SLC38A9-208ENST00000504880 TAF7LQ5H9L4 462 aa27.33■■□□□ 1.97
SLC38A9-208ENST00000504880 LRP5O75197 1615 aa27.33■■□□□ 1.97
SLC38A9-208ENST00000504880 PRPF40AO75400 957 aaKnown RBP27.33■■□□□ 1.96
SLC38A9-208ENST00000504880 PSMA5P28066 241 aa27.33■■□□□ 1.96
SLC38A9-208ENST00000504880 SLFNL1Q499Z3 407 aa27.33■■□□□ 1.96
SLC38A9-208ENST00000504880 PDE8AO60658 829 aa27.32■■□□□ 1.96
SLC38A9-208ENST00000504880 IFIT1P09914 478 aaKnown RBP27.32■■□□□ 1.96
SLC38A9-208ENST00000504880 HCLS1P14317 486 aaPredicted RBP27.31■■□□□ 1.96
SLC38A9-208ENST00000504880 HMG20BQ9P0W2 317 aa27.31■■□□□ 1.96
SLC38A9-208ENST00000504880 RIPOR2Q9Y4F9 1068 aa27.31■■□□□ 1.96
SLC38A9-208ENST00000504880 SH3TC1Q8TE82 1336 aa27.31■■□□□ 1.96
SLC38A9-208ENST00000504880 TSGA10IPQ3SY00 556 aa27.31■■□□□ 1.96
SLC38A9-208ENST00000504880 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.31■■□□□ 1.96
SLC38A9-208ENST00000504880 CCDC83Q8IWF9 413 aa27.3■■□□□ 1.96
SLC38A9-208ENST00000504880 AFF2P51816 1311 aa27.3■■□□□ 1.96
SLC38A9-208ENST00000504880 ST3GAL1Q11201 340 aa27.29■■□□□ 1.96
SLC38A9-208ENST00000504880 MEX3CQ5U5Q3 659 aaKnown RBP27.29■■□□□ 1.96
SLC38A9-208ENST00000504880 BLOC1S2Q6QNY1 142 aa27.29■■□□□ 1.96
SLC38A9-208ENST00000504880 GAS2L3Q86XJ1 694 aa27.29■■□□□ 1.96
SLC38A9-208ENST00000504880 XAGE2Q96GT9 111 aa27.29■■□□□ 1.96
SLC38A9-208ENST00000504880 ZSCAN31Q96LW9 406 aaPredicted RBP27.29■■□□□ 1.96
SLC38A9-208ENST00000504880 WDR33Q9C0J8 1336 aaKnown RBP27.29■■□□□ 1.96
SLC38A9-208ENST00000504880 ME3Q16798 604 aa27.29■■□□□ 1.96
SLC38A9-208ENST00000504880 SH2B1Q9NRF2 756 aaPredicted RBP27.29■■□□□ 1.96
SLC38A9-208ENST00000504880 AKAP2Q9Y2D5 859 aa27.29■■□□□ 1.96
SLC38A9-208ENST00000504880 COL4A1P02462 1669 aa27.28■■□□□ 1.96
SLC38A9-208ENST00000504880 ANKRD18BA2A2Z9 1011 aa27.28■■□□□ 1.96
SLC38A9-208ENST00000504880 RPS6KB1P23443 525 aa27.28■■□□□ 1.96
SLC38A9-208ENST00000504880 LDHAL6AQ6ZMR3 332 aa27.28■■□□□ 1.96
SLC38A9-208ENST00000504880 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.28■■□□□ 1.96
SLC38A9-208ENST00000504880 TCEANC2Q96MN5 208 aa27.28■■□□□ 1.96
SLC38A9-208ENST00000504880 TPCN1Q9ULQ1 816 aa27.28■■□□□ 1.96
SLC38A9-208ENST00000504880 NTSR2O95665 410 aa27.28■■□□□ 1.96
SLC38A9-208ENST00000504880 GJD4Q96KN9 370 aaPredicted RBP27.28■■□□□ 1.96
SLC38A9-208ENST00000504880 SMC3Q9UQE7 1217 aa27.28■■□□□ 1.96
SLC38A9-208ENST00000504880 NIP7Q9Y221 180 aaKnown RBP eCLIP27.28■■□□□ 1.96
SLC38A9-208ENST00000504880 GPT2Q8TD30 523 aa27.27■■□□□ 1.96
SLC38A9-208ENST00000504880 U3KPZ7 1027 aaPredicted RBP27.27■■□□□ 1.96
SLC38A9-208ENST00000504880 LAMB2P55268 1798 aa27.27■■□□□ 1.96
SLC38A9-208ENST00000504880 SCARF1Q14162 830 aa27.26■■□□□ 1.95
SLC38A9-208ENST00000504880 METTL24Q5JXM2 366 aa27.26■■□□□ 1.95
SLC38A9-208ENST00000504880 VGLL2Q8N8G2 317 aa27.26■■□□□ 1.95
SLC38A9-208ENST00000504880 UTP14AQ9BVJ6 771 aaKnown RBP27.26■■□□□ 1.95
SLC38A9-208ENST00000504880 HELLSQ9NRZ9 838 aa27.26■■□□□ 1.95
SLC38A9-208ENST00000504880 ISY1Q9ULR0 285 aaKnown RBP27.26■■□□□ 1.95
SLC38A9-208ENST00000504880 DTNBO60941 627 aa27.26■■□□□ 1.95
SLC38A9-208ENST00000504880 NCLP19338 710 aaKnown RBP27.26■■□□□ 1.95
SLC38A9-208ENST00000504880 MRE11P49959 708 aa27.26■■□□□ 1.95
SLC38A9-208ENST00000504880 CCDC158Q5M9N0 1113 aa27.26■■□□□ 1.95
SLC38A9-208ENST00000504880 ZMYM1Q5SVZ6 1142 aa27.26■■□□□ 1.95
SLC38A9-208ENST00000504880 SCN7AQ01118 1682 aa27.25■■□□□ 1.95
SLC38A9-208ENST00000504880 SPEF2Q9C093 1822 aa27.25■■□□□ 1.95
SLC38A9-208ENST00000504880 TTC39AQ5SRH9 613 aa27.25■■□□□ 1.95
SLC38A9-208ENST00000504880 GORABQ5T7V8 394 aa27.25■■□□□ 1.95
SLC38A9-208ENST00000504880 NECAB1Q8N987 351 aa27.25■■□□□ 1.95
SLC38A9-208ENST00000504880 PANK2Q9BZ23 570 aa27.25■■□□□ 1.95
SLC38A9-208ENST00000504880 GRPEL1Q9HAV7 217 aa27.25■■□□□ 1.95
SLC38A9-208ENST00000504880 SBF2Q86WG5 1849 aa27.25■■□□□ 1.95
SLC38A9-208ENST00000504880 SYT1P21579 422 aa27.24■■□□□ 1.95
SLC38A9-208ENST00000504880 CAVIN1Q6NZI2 390 aaKnown RBP27.24■■□□□ 1.95
SLC38A9-208ENST00000504880 TICAM2Q86XR7 235 aa27.24■■□□□ 1.95
SLC38A9-208ENST00000504880 CNNM1Q9NRU3 951 aa27.24■■□□□ 1.95
SLC38A9-208ENST00000504880 EP400Q96L91 3159 aa27.24■■□□□ 1.95
SLC38A9-208ENST00000504880 ATRNO75882 1429 aa27.24■■□□□ 1.95
SLC38A9-208ENST00000504880 CYP21A2P08686 494 aa27.24■■□□□ 1.95
SLC38A9-208ENST00000504880 FKBP4Q02790 459 aaKnown RBP eCLIP27.24■■□□□ 1.95
SLC38A9-208ENST00000504880 TOB2Q14106 344 aaPredicted RBP27.24■■□□□ 1.95
SLC38A9-208ENST00000504880 FOXD4L6Q3SYB3 417 aaPredicted RBP27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms