RNA–Protein interactions for RNA: ENST00000504610.2

AP002884.3-201, humanhuman

TSL 2 BASIC

Gene AP002884.3, Length 2,749 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002884.3-201ENST00000504610 CUL4AQ13619 759 aa11.33□□□□□ -0.6
AP002884.3-201ENST00000504610 GIGYF2Q6Y7W6 1299 aaKnown RBP11.33□□□□□ -0.6
AP002884.3-201ENST00000504610 NLRP10Q86W26 655 aa11.33□□□□□ -0.6
AP002884.3-201ENST00000504610 CHMP4AQ9BY43 222 aa11.33□□□□□ -0.6
AP002884.3-201ENST00000504610 TLR7Q9NYK1 1049 aaKnown RBP11.33□□□□□ -0.6
AP002884.3-201ENST00000504610 LRRC24Q50LG9 513 aa11.32□□□□□ -0.6
AP002884.3-201ENST00000504610 SMARCC1Q92922 1105 aaPredicted RBP11.32□□□□□ -0.6
AP002884.3-201ENST00000504610 CWC25Q9NXE8 425 aaPredicted RBP11.32□□□□□ -0.6
AP002884.3-201ENST00000504610 COL4A1P02462 1669 aa11.32□□□□□ -0.6
AP002884.3-201ENST00000504610 RFC4P35249 363 aa11.32□□□□□ -0.6
AP002884.3-201ENST00000504610 IL6STP40189 918 aaPredicted RBP11.32□□□□□ -0.6
AP002884.3-201ENST00000504610 FAM193AP78312 1265 aa11.32□□□□□ -0.6
AP002884.3-201ENST00000504610 OS9Q13438 667 aaPredicted RBP11.32□□□□□ -0.6
AP002884.3-201ENST00000504610 FEZ1Q99689 392 aa11.32□□□□□ -0.6
AP002884.3-201ENST00000504610 GREM2Q9H772 168 aa11.32□□□□□ -0.6
AP002884.3-201ENST00000504610 AFDNP55196 1824 aaKnown RBP11.32□□□□□ -0.6
AP002884.3-201ENST00000504610 KIAA2012Q0VF49 1180 aa11.31□□□□□ -0.6
AP002884.3-201ENST00000504610 ERFEQ4G0M1 354 aa11.31□□□□□ -0.6
AP002884.3-201ENST00000504610 OLFM4Q6UX06 510 aa11.31□□□□□ -0.6
AP002884.3-201ENST00000504610 ILDR2Q71H61 639 aa11.31□□□□□ -0.6
AP002884.3-201ENST00000504610 COL23A1Q86Y22 540 aaPredicted RBP11.31□□□□□ -0.6
AP002884.3-201ENST00000504610 CCDC8Q9H0W5 538 aaPredicted RBP11.31□□□□□ -0.6
AP002884.3-201ENST00000504610 CASP7P55210 303 aa11.3□□□□□ -0.6
AP002884.3-201ENST00000504610 ATP8B2P98198 1209 aa11.3□□□□□ -0.6
AP002884.3-201ENST00000504610 ZPR1O75312 459 aa11.3□□□□□ -0.6
AP002884.3-201ENST00000504610 ZSCAN23Q3MJ62 389 aa11.3□□□□□ -0.6
AP002884.3-201ENST00000504610 SLFNL1Q499Z3 407 aa11.3□□□□□ -0.6
AP002884.3-201ENST00000504610 EDC3Q96F86 508 aaKnown RBP11.3□□□□□ -0.6
AP002884.3-201ENST00000504610 ZNF219Q9P2Y4 722 aaPredicted RBP11.3□□□□□ -0.6
AP002884.3-201ENST00000504610 LAMB4A4D0S4 1761 aa11.3□□□□□ -0.6
AP002884.3-201ENST00000504610 NUP98P52948 1817 aa11.3□□□□□ -0.6
AP002884.3-201ENST00000504610 IRS4O14654 1257 aaPredicted RBP11.29□□□□□ -0.6
AP002884.3-201ENST00000504610 FOXO4P98177 505 aa11.29□□□□□ -0.6
AP002884.3-201ENST00000504610 TRAPPC3LQ5T215 181 aa11.29□□□□□ -0.6
AP002884.3-201ENST00000504610 ESYT1Q9BSJ8 1104 aa11.29□□□□□ -0.6
AP002884.3-201ENST00000504610 TEX13AQ9BXU3 409 aaPredicted RBP11.29□□□□□ -0.6
AP002884.3-201ENST00000504610 LRRCC1Q9C099 1032 aa11.29□□□□□ -0.6
AP002884.3-201ENST00000504610 TAF5LO75529 589 aa11.29□□□□□ -0.6
AP002884.3-201ENST00000504610 NFIXQ14938 502 aa11.29□□□□□ -0.6
AP002884.3-201ENST00000504610 MCTP1Q6DN14 999 aa11.29□□□□□ -0.6
AP002884.3-201ENST00000504610 ISCA1Q9BUE6 129 aa11.29□□□□□ -0.6
AP002884.3-201ENST00000504610 NHSQ6T4R5 1651 aa11.29□□□□□ -0.6
AP002884.3-201ENST00000504610 RAB11FIP3O75154 756 aa11.29□□□□□ -0.6
AP002884.3-201ENST00000504610 GABPB1Q06547 395 aaPredicted RBP11.29□□□□□ -0.6
AP002884.3-201ENST00000504610 ZNF710Q8N1W2 664 aa11.29□□□□□ -0.6
AP002884.3-201ENST00000504610 GPR101Q96P66 508 aaPredicted RBP11.29□□□□□ -0.6
AP002884.3-201ENST00000504610 PRDM10Q9NQV6 1147 aa11.29□□□□□ -0.6
AP002884.3-201ENST00000504610 PPP1R1BQ9UD71 204 aaPredicted RBP11.29□□□□□ -0.6
AP002884.3-201ENST00000504610 CARMIL3Q8ND23 1372 aa11.28□□□□□ -0.6
AP002884.3-201ENST00000504610 ABCC12Q96J65 1359 aa11.28□□□□□ -0.6
AP002884.3-201ENST00000504610 CENPFP49454 3210 aa11.28□□□□□ -0.6
AP002884.3-201ENST00000504610 RPS6KA4O75676 772 aa11.28□□□□□ -0.6
AP002884.3-201ENST00000504610 ZBTB7AO95365 584 aa11.28□□□□□ -0.6
AP002884.3-201ENST00000504610 BRD1O95696 1058 aa11.28□□□□□ -0.6
AP002884.3-201ENST00000504610 TIMM10P62072 90 aa11.28□□□□□ -0.6
AP002884.3-201ENST00000504610 SYCP1Q15431 976 aa11.28□□□□□ -0.6
AP002884.3-201ENST00000504610 LRSAM1Q6UWE0 723 aa11.28□□□□□ -0.6
AP002884.3-201ENST00000504610 RBSNQ9H1K0 784 aa11.28□□□□□ -0.6
AP002884.3-201ENST00000504610 PIBF1Q8WXW3 757 aa11.28□□□□□ -0.6
AP002884.3-201ENST00000504610 IQSEC3Q9UPP2 1182 aaPredicted RBP11.28□□□□□ -0.6
AP002884.3-201ENST00000504610 JAG2Q9Y219 1238 aa11.28□□□□□ -0.6
AP002884.3-201ENST00000504610 ZDHHC9Q9Y397 364 aa11.28□□□□□ -0.6
AP002884.3-201ENST00000504610 SASH1O94885 1247 aa11.27□□□□□ -0.61
AP002884.3-201ENST00000504610 GYS1P13807 737 aa11.27□□□□□ -0.61
AP002884.3-201ENST00000504610 MX1P20591 662 aa11.27□□□□□ -0.61
AP002884.3-201ENST00000504610 FOXD4L1Q9NU39 408 aa11.27□□□□□ -0.61
AP002884.3-201ENST00000504610 SPTLC3Q9NUV7 552 aa11.27□□□□□ -0.61
AP002884.3-201ENST00000504610 H7C1W4 665 aa11.27□□□□□ -0.61
AP002884.3-201ENST00000504610 DDR1Q08345 913 aa11.27□□□□□ -0.61
AP002884.3-201ENST00000504610 PI16Q6UXB8 463 aa11.27□□□□□ -0.61
AP002884.3-201ENST00000504610 NBPF5PQ86XG9 351 aaPredicted RBP11.27□□□□□ -0.61
AP002884.3-201ENST00000504610 CREBRFQ8IUR6 639 aa11.27□□□□□ -0.61
AP002884.3-201ENST00000504610 SYAP1Q96A49 352 aaPredicted RBP11.27□□□□□ -0.61
AP002884.3-201ENST00000504610 ALDH1L1O75891 902 aa11.26□□□□□ -0.61
AP002884.3-201ENST00000504610 PTPN12Q05209 780 aaKnown RBP11.26□□□□□ -0.61
AP002884.3-201ENST00000504610 TFCP2Q12800 502 aa11.26□□□□□ -0.61
AP002884.3-201ENST00000504610 ZNF34Q8IZ26 560 aa11.26□□□□□ -0.61
AP002884.3-201ENST00000504610 TMX3Q96JJ7 454 aa11.26□□□□□ -0.61
AP002884.3-201ENST00000504610 ATF5Q9Y2D1 282 aaPredicted RBP11.26□□□□□ -0.61
AP002884.3-201ENST00000504610 KIF3AQ9Y496 699 aa11.26□□□□□ -0.61
AP002884.3-201ENST00000504610 TAF1LQ8IZX4 1826 aa11.26□□□□□ -0.61
AP002884.3-201ENST00000504610 C4BP0C0L5 1744 aa11.26□□□□□ -0.61
AP002884.3-201ENST00000504610 ITGA6P23229 1130 aa11.26□□□□□ -0.61
AP002884.3-201ENST00000504610 CHMLP26374 656 aa11.26□□□□□ -0.61
AP002884.3-201ENST00000504610 ANKRD7Q92527 254 aa11.26□□□□□ -0.61
AP002884.3-201ENST00000504610 CAMKK2Q96RR4 588 aa11.26□□□□□ -0.61
AP002884.3-201ENST00000504610 NUP188Q5SRE5 1749 aa11.26□□□□□ -0.61
AP002884.3-201ENST00000504610 NTSR2O95665 410 aa11.25□□□□□ -0.61
AP002884.3-201ENST00000504610 UVSSAQ2YD98 709 aa11.25□□□□□ -0.61
AP002884.3-201ENST00000504610 CAVIN1Q6NZI2 390 aaKnown RBP11.25□□□□□ -0.61
AP002884.3-201ENST00000504610 TMEM87AQ8NBN3 555 aa11.25□□□□□ -0.61
AP002884.3-201ENST00000504610 CCDC191Q8NCU4 936 aa11.25□□□□□ -0.61
AP002884.3-201ENST00000504610 TTLL11Q8NHH1 800 aa11.25□□□□□ -0.61
AP002884.3-201ENST00000504610 SETDB2Q96T68 719 aa11.25□□□□□ -0.61
AP002884.3-201ENST00000504610 USP42Q9H9J4 1324 aaKnown RBP11.25□□□□□ -0.61
AP002884.3-201ENST00000504610 R3HDM1Q15032 1099 aaKnown RBP11.25□□□□□ -0.61
AP002884.3-201ENST00000504610 PDCL2Q8N4E4 241 aa11.25□□□□□ -0.61
AP002884.3-201ENST00000504610 ZBTB38Q8NAP3 1195 aaPredicted RBP11.25□□□□□ -0.61
AP002884.3-201ENST00000504610 GPT2Q8TD30 523 aa11.25□□□□□ -0.61
AP002884.3-201ENST00000504610 SSH3Q8TE77 659 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms