RNA–Protein interactions for RNA: ENST00000504466.1

HMGCR-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 1,107 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-204ENST00000504466 RAC1P63000 192 aa8.07□□□□□ -1.12
HMGCR-204ENST00000504466 ELOAQ14241 798 aaKnown RBP8.07□□□□□ -1.12
HMGCR-204ENST00000504466 NUDT8Q8WV74 236 aa8.07□□□□□ -1.12
HMGCR-204ENST00000504466 TTC9Q92623 222 aa8.07□□□□□ -1.12
HMGCR-204ENST00000504466 ZFATQ9P243 1243 aa8.07□□□□□ -1.12
HMGCR-204ENST00000504466 ZBTB42B2RXF5 422 aa8.06□□□□□ -1.12
HMGCR-204ENST00000504466 ARSDP51689 593 aa8.06□□□□□ -1.12
HMGCR-204ENST00000504466 NRG1Q02297 640 aaPredicted RBP8.06□□□□□ -1.12
HMGCR-204ENST00000504466 TBC1D8BQ0IIM8 1120 aa8.06□□□□□ -1.12
HMGCR-204ENST00000504466 DGKZQ13574 1117 aa8.06□□□□□ -1.12
HMGCR-204ENST00000504466 GRIK5Q16478 980 aa8.06□□□□□ -1.12
HMGCR-204ENST00000504466 C11orf91Q3C1V1 193 aa8.06□□□□□ -1.12
HMGCR-204ENST00000504466 FMR1NBQ8N0W7 255 aaPredicted RBP8.06□□□□□ -1.12
HMGCR-204ENST00000504466 IGFLR1Q9H665 355 aa8.06□□□□□ -1.12
HMGCR-204ENST00000504466 RGS9O75916 674 aaPredicted RBP8.05□□□□□ -1.12
HMGCR-204ENST00000504466 MICAL2O94851 1124 aa8.05□□□□□ -1.12
HMGCR-204ENST00000504466 EGFRP00533 1210 aa8.05□□□□□ -1.12
HMGCR-204ENST00000504466 H2AFB1P0C5Y9 115 aa8.05□□□□□ -1.12
HMGCR-204ENST00000504466 H2AFB2P0C5Z0 115 aa8.05□□□□□ -1.12
HMGCR-204ENST00000504466 FOXD4L6Q3SYB3 417 aaPredicted RBP8.05□□□□□ -1.12
HMGCR-204ENST00000504466 ZMYM1Q5SVZ6 1142 aa8.05□□□□□ -1.12
HMGCR-204ENST00000504466 FOXD4L3Q6VB84 417 aaPredicted RBP8.05□□□□□ -1.12
HMGCR-204ENST00000504466 TXNRD3Q86VQ6 643 aa8.05□□□□□ -1.12
HMGCR-204ENST00000504466 DTWD1Q8N5C7 304 aa8.05□□□□□ -1.12
HMGCR-204ENST00000504466 IFT43Q96FT9 208 aa8.05□□□□□ -1.12
HMGCR-204ENST00000504466 LPIN3Q9BQK8 851 aa8.05□□□□□ -1.12
HMGCR-204ENST00000504466 GRIN2BQ13224 1484 aa8.05□□□□□ -1.12
HMGCR-204ENST00000504466 ADAMTS12P58397 1594 aa8.05□□□□□ -1.12
HMGCR-204ENST00000504466 CTTNBP2Q8WZ74 1663 aa8.05□□□□□ -1.12
HMGCR-204ENST00000504466 TMEM88BA6NKF7 163 aa8.04□□□□□ -1.12
HMGCR-204ENST00000504466 PATL2C9JE40 543 aaKnown RBP8.04□□□□□ -1.12
HMGCR-204ENST00000504466 OPLAHO14841 1288 aa8.04□□□□□ -1.12
HMGCR-204ENST00000504466 BRD1O95696 1058 aa8.04□□□□□ -1.12
HMGCR-204ENST00000504466 RANGAP1P46060 587 aaPredicted RBP8.04□□□□□ -1.12
HMGCR-204ENST00000504466 GPLD1P80108 840 aa8.04□□□□□ -1.12
HMGCR-204ENST00000504466 MSL1Q68DK7 614 aa8.04□□□□□ -1.12
HMGCR-204ENST00000504466 DHX32Q7L7V1 743 aaKnown RBP8.04□□□□□ -1.12
HMGCR-204ENST00000504466 FAM35AQ86V20 835 aa8.04□□□□□ -1.12
HMGCR-204ENST00000504466 FAM200AQ8TCP9 573 aa8.04□□□□□ -1.12
HMGCR-204ENST00000504466 SSBP4Q9BWG4 385 aaPredicted RBP8.04□□□□□ -1.12
HMGCR-204ENST00000504466 LRFN2Q9ULH4 789 aa8.04□□□□□ -1.12
HMGCR-204ENST00000504466 NOVA2Q9UNW9 492 aaKnown RBP8.04□□□□□ -1.12
HMGCR-204ENST00000504466 EIF4G3O43432 1585 aaKnown RBP8.04□□□□□ -1.12
HMGCR-204ENST00000504466 FHAD1B1AJZ9 1412 aa8.03□□□□□ -1.12
HMGCR-204ENST00000504466 TARSP26639 723 aaKnown RBP8.03□□□□□ -1.12
HMGCR-204ENST00000504466 DMRTC2Q8IXT2 367 aaPredicted RBP8.03□□□□□ -1.12
HMGCR-204ENST00000504466 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.03□□□□□ -1.121e-6■■■■■ 33.1
HMGCR-204ENST00000504466 ZMIZ1Q9ULJ6 1067 aa8.03□□□□□ -1.12
HMGCR-204ENST00000504466 CARNS1A5YM72 827 aa8.02□□□□□ -1.13
HMGCR-204ENST00000504466 PERM1Q5SV97 790 aa8.02□□□□□ -1.13
HMGCR-204ENST00000504466 SHISA2Q6UWI4 295 aa8.02□□□□□ -1.13
HMGCR-204ENST00000504466 FBXO11Q86XK2 927 aa8.02□□□□□ -1.13
HMGCR-204ENST00000504466 CPB1P15086 417 aa8.01□□□□□ -1.13
HMGCR-204ENST00000504466 NRLP54845 237 aa8.01□□□□□ -1.13
HMGCR-204ENST00000504466 SWI5Q1ZZU3 235 aa8.01□□□□□ -1.13
HMGCR-204ENST00000504466 PRSS36Q5K4E3 855 aa8.01□□□□□ -1.13
HMGCR-204ENST00000504466 STK32AQ8WU08 396 aa8.01□□□□□ -1.13
HMGCR-204ENST00000504466 RTCBQ9Y3I0 505 aaKnown RBP8.01□□□□□ -1.13
HMGCR-204ENST00000504466 SASH3O75995 380 aa8□□□□□ -1.13
HMGCR-204ENST00000504466 RARAP10276 462 aa8□□□□□ -1.13
HMGCR-204ENST00000504466 HOXD8P13378 290 aaPredicted RBP8□□□□□ -1.13
HMGCR-204ENST00000504466 KCNA1Q09470 495 aa8□□□□□ -1.13
HMGCR-204ENST00000504466 TMEM164Q5U3C3 297 aa8□□□□□ -1.13
HMGCR-204ENST00000504466 VTI1AQ96AJ9 217 aa8□□□□□ -1.13
HMGCR-204ENST00000504466 KRTAP4-8Q9BYQ9 185 aa8□□□□□ -1.13
HMGCR-204ENST00000504466 TLR7Q9NYK1 1049 aaKnown RBP8□□□□□ -1.13
HMGCR-204ENST00000504466 SNAPC4Q5SXM2 1469 aa8□□□□□ -1.13
HMGCR-204ENST00000504466 PLAURQ03405 335 aa7.99□□□□□ -1.13
HMGCR-204ENST00000504466 FAM69CQ0P6D2 419 aa7.99□□□□□ -1.13
HMGCR-204ENST00000504466 FKBP5Q13451 457 aaPredicted RBP7.99□□□□□ -1.13
HMGCR-204ENST00000504466 OCLNQ16625 522 aa7.99□□□□□ -1.13
HMGCR-204ENST00000504466 SAMD9Q5K651 1589 aa7.99□□□□□ -1.13
HMGCR-204ENST00000504466 COX20Q5RI15 118 aa7.99□□□□□ -1.13
HMGCR-204ENST00000504466 B4GALNT3Q6L9W6 998 aa7.99□□□□□ -1.13
HMGCR-204ENST00000504466 KRT25Q7Z3Z0 450 aa7.99□□□□□ -1.13
HMGCR-204ENST00000504466 EFCAB5A4FU69 1503 aa7.98□□□□□ -1.13
HMGCR-204ENST00000504466 ARID4AP29374 1257 aaPredicted RBP7.98□□□□□ -1.13
HMGCR-204ENST00000504466 ELMSAN1Q6PJG2 1045 aa7.98□□□□□ -1.13
HMGCR-204ENST00000504466 TREML1Q86YW5 311 aa7.98□□□□□ -1.13
HMGCR-204ENST00000504466 COL26A1Q96A83 441 aa7.98□□□□□ -1.13
HMGCR-204ENST00000504466 KCNMB2Q9Y691 235 aa7.98□□□□□ -1.13
HMGCR-204ENST00000504466 MAGI1Q96QZ7 1491 aaPredicted RBP7.98□□□□□ -1.13
HMGCR-204ENST00000504466 XYLBO75191 536 aa7.97□□□□□ -1.13
HMGCR-204ENST00000504466 SOX18P35713 384 aa7.97□□□□□ -1.13
HMGCR-204ENST00000504466 ARTNQ5T4W7 220 aa7.97□□□□□ -1.13
HMGCR-204ENST00000504466 IGF2-ASQ6U949 168 aa7.97□□□□□ -1.13
HMGCR-204ENST00000504466 CCDC9Q9Y3X0 531 aaKnown RBP7.97□□□□□ -1.13
HMGCR-204ENST00000504466 GRIN2AQ12879 1464 aa7.97□□□□□ -1.13
HMGCR-204ENST00000504466 FHOD3Q2V2M9 1422 aa7.96□□□□□ -1.13
HMGCR-204ENST00000504466 DEAF1O75398 565 aaPredicted RBP7.96□□□□□ -1.14
HMGCR-204ENST00000504466 WFDC8Q8IUA0 241 aa7.96□□□□□ -1.14
HMGCR-204ENST00000504466 USP21Q9UK80 565 aa7.96□□□□□ -1.14
HMGCR-204ENST00000504466 SYNJ2O15056 1496 aa7.95□□□□□ -1.14
HMGCR-204ENST00000504466 MAP3K1Q13233 1512 aa7.95□□□□□ -1.14
HMGCR-204ENST00000504466 MLLT1Q03111 559 aaPredicted RBP7.95□□□□□ -1.14
HMGCR-204ENST00000504466 WFDC12Q8WWY7 111 aa7.95□□□□□ -1.14
HMGCR-204ENST00000504466 TP53INP1Q96A56 240 aa7.95□□□□□ -1.14
HMGCR-204ENST00000504466 SMG9Q9H0W8 520 aaKnown RBP7.95□□□□□ -1.14
HMGCR-204ENST00000504466 GZF1Q9H116 711 aaPredicted RBP7.95□□□□□ -1.14
HMGCR-204ENST00000504466 USP20Q9Y2K6 914 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms