RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 CCDC57Q2TAC2 916 aa13.86□□□□□ -0.19
USP46-204ENST00000503060 PUS3Q9BZE2 481 aaKnown RBP13.86□□□□□ -0.19
USP46-204ENST00000503060 TM6SF1Q9BZW5 370 aa13.86□□□□□ -0.19
USP46-204ENST00000503060 NWD2Q9ULI1 1742 aa13.86□□□□□ -0.19
USP46-204ENST00000503060 SLIT2O94813 1529 aa13.86□□□□□ -0.19
USP46-204ENST00000503060 CSF1RP07333 972 aa13.86□□□□□ -0.19
USP46-204ENST00000503060 GPTP24298 496 aa13.86□□□□□ -0.19
USP46-204ENST00000503060 MARCH10Q8NA82 808 aaPredicted RBP13.86□□□□□ -0.19
USP46-204ENST00000503060 ZDHHC9Q9Y397 364 aa13.86□□□□□ -0.19
USP46-204ENST00000503060 JCADQ9P266 1359 aa13.86□□□□□ -0.19
USP46-204ENST00000503060 GOLGA6L22H0YM25 854 aa13.85□□□□□ -0.19
USP46-204ENST00000503060 CASTP20810 708 aaKnown RBP13.85□□□□□ -0.19
USP46-204ENST00000503060 KCNJ4P48050 445 aa13.85□□□□□ -0.19
USP46-204ENST00000503060 TIMM10P62072 90 aa13.85□□□□□ -0.19
USP46-204ENST00000503060 CREB3L3Q68CJ9 461 aa13.85□□□□□ -0.19
USP46-204ENST00000503060 NDUFB9Q9Y6M9 179 aa13.85□□□□□ -0.19
USP46-204ENST00000503060 ANKRD36CQ5JPF3 1778 aa13.85□□□□□ -0.19
USP46-204ENST00000503060 ERVV-1B6SEH8 477 aa13.85□□□□□ -0.19
USP46-204ENST00000503060 AK2P54819 239 aa13.85□□□□□ -0.19
USP46-204ENST00000503060 SKOR2Q2VWA4 1001 aaPredicted RBP13.85□□□□□ -0.19
USP46-204ENST00000503060 BARGINQ6ZT62 677 aa13.85□□□□□ -0.19
USP46-204ENST00000503060 JAKMIP1Q96N16 626 aaKnown RBP13.85□□□□□ -0.19
USP46-204ENST00000503060 ZKSCAN1P17029 563 aaPredicted RBP13.84□□□□□ -0.19
USP46-204ENST00000503060 ADCK5Q3MIX3 580 aa13.84□□□□□ -0.19
USP46-204ENST00000503060 ZNF589Q86UQ0 364 aaPredicted RBP13.84□□□□□ -0.19
USP46-204ENST00000503060 DZIP3Q86Y13 1208 aaKnown RBP13.84□□□□□ -0.19
USP46-204ENST00000503060 ACSBG1Q96GR2 724 aa13.84□□□□□ -0.19
USP46-204ENST00000503060 GZF1Q9H116 711 aaPredicted RBP13.84□□□□□ -0.19
USP46-204ENST00000503060 ZSWIM6Q9HCJ5 1215 aa13.84□□□□□ -0.19
USP46-204ENST00000503060 CEP126Q9P2H0 1117 aa13.84□□□□□ -0.19
USP46-204ENST00000503060 A0A0G2JS52 829 aa13.84□□□□□ -0.19
USP46-204ENST00000503060 A0A1B0GUL7 405 aa13.84□□□□□ -0.19
USP46-204ENST00000503060 SLC27A2O14975 620 aa13.84□□□□□ -0.19
USP46-204ENST00000503060 DDX46Q7L014 1031 aaKnown RBP13.84□□□□□ -0.19
USP46-204ENST00000503060 SYNE4Q8N205 404 aa13.84□□□□□ -0.19
USP46-204ENST00000503060 KBTBD3Q8NAB2 608 aa13.84□□□□□ -0.19
USP46-204ENST00000503060 CCDC85AQ96PX6 553 aaPredicted RBP13.84□□□□□ -0.19
USP46-204ENST00000503060 TAF5LO75529 589 aa13.83□□□□□ -0.19
USP46-204ENST00000503060 CPA1P15085 419 aa13.83□□□□□ -0.19
USP46-204ENST00000503060 IFIT5Q13325 482 aaKnown RBP13.83□□□□□ -0.19
USP46-204ENST00000503060 VPS53Q5VIR6 699 aa13.83□□□□□ -0.19
USP46-204ENST00000503060 RUFY3Q7L099 469 aa13.83□□□□□ -0.19
USP46-204ENST00000503060 LIMCH1Q9UPQ0 1083 aa13.83□□□□□ -0.19
USP46-204ENST00000503060 TBC1D2BQ9UPU7 963 aa13.83□□□□□ -0.19
USP46-204ENST00000503060 CYP46A1Q9Y6A2 500 aa13.83□□□□□ -0.19
USP46-204ENST00000503060 PDRG1Q9NUG6 133 aa13.83□□□□□ -0.2
USP46-204ENST00000503060 PAG1Q9NWQ8 432 aa13.83□□□□□ -0.2
USP46-204ENST00000503060 PALLDQ8WX93 1383 aa13.83□□□□□ -0.2
USP46-204ENST00000503060 NUP98P52948 1817 aa13.83□□□□□ -0.2
USP46-204ENST00000503060 EIF5P55010 431 aaKnown RBP13.82□□□□□ -0.2
USP46-204ENST00000503060 RNF20Q5VTR2 975 aa13.82□□□□□ -0.2
USP46-204ENST00000503060 INTS5Q6P9B9 1019 aaKnown RBP13.82□□□□□ -0.2
USP46-204ENST00000503060 CCDC87Q9NVE4 849 aa13.82□□□□□ -0.2
USP46-204ENST00000503060 RPAP1Q9BWH6 1393 aaPredicted RBP13.82□□□□□ -0.2
USP46-204ENST00000503060 GOLIM4O00461 696 aa13.82□□□□□ -0.2
USP46-204ENST00000503060 BRD1O95696 1058 aa13.82□□□□□ -0.2
USP46-204ENST00000503060 ATP6V1AP38606 617 aa13.82□□□□□ -0.2
USP46-204ENST00000503060 MCTP1Q6DN14 999 aa13.82□□□□□ -0.2
USP46-204ENST00000503060 ZNF34Q8IZ26 560 aa13.82□□□□□ -0.2
USP46-204ENST00000503060 TTLL11Q8NHH1 800 aa13.82□□□□□ -0.2
USP46-204ENST00000503060 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.82□□□□□ -0.2
USP46-204ENST00000503060 TRMT112Q9UI30 125 aaKnown RBP13.82□□□□□ -0.2
USP46-204ENST00000503060 AKAP2Q9Y2D5 859 aa13.82□□□□□ -0.2
USP46-204ENST00000503060 IRS4O14654 1257 aaPredicted RBP13.81□□□□□ -0.2
USP46-204ENST00000503060 IFIT1P09914 478 aaKnown RBP13.81□□□□□ -0.2
USP46-204ENST00000503060 CTSWP56202 376 aa13.81□□□□□ -0.2
USP46-204ENST00000503060 SH3TC1Q8TE82 1336 aa13.81□□□□□ -0.2
USP46-204ENST00000503060 LOC102724428A0A0B4J2F2 783 aa13.81□□□□□ -0.2
USP46-204ENST00000503060 CHGBP05060 677 aa13.81□□□□□ -0.2
USP46-204ENST00000503060 PSMA5P28066 241 aa13.81□□□□□ -0.2
USP46-204ENST00000503060 SIK1P57059 783 aa13.81□□□□□ -0.2
USP46-204ENST00000503060 MCMDC2Q4G0Z9 681 aa13.81□□□□□ -0.2
USP46-204ENST00000503060 USPL1Q5W0Q7 1092 aa13.81□□□□□ -0.2
USP46-204ENST00000503060 HMG20BQ9P0W2 317 aa13.81□□□□□ -0.2
USP46-204ENST00000503060 UBN2Q6ZU65 1347 aa13.8□□□□□ -0.2
USP46-204ENST00000503060 CRKLP46109 303 aaKnown RBP13.8□□□□□ -0.2
USP46-204ENST00000503060 SEC62Q99442 399 aaKnown RBP13.8□□□□□ -0.2
USP46-204ENST00000503060 LARP6Q9BRS8 491 aaKnown RBP13.8□□□□□ -0.2
USP46-204ENST00000503060 GREM2Q9H772 168 aa13.8□□□□□ -0.2
USP46-204ENST00000503060 RREB1Q92766 1687 aa13.8□□□□□ -0.2
USP46-204ENST00000503060 CICQ96RK0 1608 aaPredicted RBP13.8□□□□□ -0.2
USP46-204ENST00000503060 RIC1Q4ADV7 1423 aa13.8□□□□□ -0.2
USP46-204ENST00000503060 ANKRD18BA2A2Z9 1011 aa13.8□□□□□ -0.2
USP46-204ENST00000503060 ITGA6P23229 1130 aa13.8□□□□□ -0.2
USP46-204ENST00000503060 ITPK1Q13572 414 aa13.8□□□□□ -0.2
USP46-204ENST00000503060 TSGA10IPQ3SY00 556 aa13.8□□□□□ -0.2
USP46-204ENST00000503060 L1TD1Q5T7N2 865 aaKnown RBP13.8□□□□□ -0.2
USP46-204ENST00000503060 CCDC129Q6ZRS4 1044 aa13.8□□□□□ -0.2
USP46-204ENST00000503060 ZSCAN31Q96LW9 406 aaPredicted RBP13.8□□□□□ -0.2
USP46-204ENST00000503060 SPEF2Q9C093 1822 aa13.79□□□□□ -0.2
USP46-204ENST00000503060 FSD2A1L4K1 749 aa13.79□□□□□ -0.2
USP46-204ENST00000503060 PDE8AO60658 829 aa13.79□□□□□ -0.2
USP46-204ENST00000503060 ADORA1P30542 326 aa13.79□□□□□ -0.2
USP46-204ENST00000503060 XAGE2Q96GT9 111 aa13.79□□□□□ -0.2
USP46-204ENST00000503060 HELLSQ9NRZ9 838 aa13.79□□□□□ -0.2
USP46-204ENST00000503060 RIPOR2Q9Y4F9 1068 aa13.79□□□□□ -0.2
USP46-204ENST00000503060 UBAP1LF5GYI3 381 aa13.79□□□□□ -0.2
USP46-204ENST00000503060 CCDC158Q5M9N0 1113 aa13.79□□□□□ -0.2
USP46-204ENST00000503060 TTC39AQ5SRH9 613 aa13.79□□□□□ -0.2
USP46-204ENST00000503060 GORABQ5T7V8 394 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms