RNA–Protein interactions for RNA: ENST00000502555.5

SGCA-203, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-203ENST00000502555 DBNLQ9UJU6 430 aaKnown RBP16.51■□□□□ 0.23
SGCA-203ENST00000502555 NRXN2Q9P2S2 1712 aa16.51■□□□□ 0.23
SGCA-203ENST00000502555 SDSP20132 328 aa16.5■□□□□ 0.23
SGCA-203ENST00000502555 CCDC24Q8N4L8 307 aa16.5■□□□□ 0.23
SGCA-203ENST00000502555 SLC16A10Q8TF71 515 aa16.5■□□□□ 0.23
SGCA-203ENST00000502555 BSDC1Q9NW68 430 aaPredicted RBP16.5■□□□□ 0.23
SGCA-203ENST00000502555 TLR7Q9NYK1 1049 aaKnown RBP16.5■□□□□ 0.23
SGCA-203ENST00000502555 A0A1B0GUL7 405 aa16.49■□□□□ 0.23
SGCA-203ENST00000502555 KLRG2A4D1S0 409 aaPredicted RBP16.49■□□□□ 0.23
SGCA-203ENST00000502555 CDC45O75419 566 aa16.49■□□□□ 0.23
SGCA-203ENST00000502555 PDE8BO95263 885 aa16.49■□□□□ 0.23
SGCA-203ENST00000502555 ATP2B3Q16720 1220 aa16.49■□□□□ 0.23
SGCA-203ENST00000502555 DBNDD2Q9BQY9 259 aa16.49■□□□□ 0.23
SGCA-203ENST00000502555 BRIP1Q9BX63 1249 aa16.49■□□□□ 0.23
SGCA-203ENST00000502555 EIF5BO60841 1220 aaKnown RBP16.48■□□□□ 0.23
SGCA-203ENST00000502555 ATP5JP18859 108 aa16.48■□□□□ 0.23
SGCA-203ENST00000502555 RPS8P62241 208 aaKnown RBP16.48■□□□□ 0.23
SGCA-203ENST00000502555 PUM3Q15397 648 aaKnown RBP16.48■□□□□ 0.23
SGCA-203ENST00000502555 MSL1Q68DK7 614 aa16.48■□□□□ 0.23
SGCA-203ENST00000502555 RPGRQ92834 1020 aaKnown RBP16.48■□□□□ 0.23
SGCA-203ENST00000502555 UPF1Q92900 1129 aaKnown RBP eCLIP16.48■□□□□ 0.23
SGCA-203ENST00000502555 GRAPQ13588 217 aa16.47■□□□□ 0.23
SGCA-203ENST00000502555 GRAPLQ8TC17 118 aaPredicted RBP16.47■□□□□ 0.23
SGCA-203ENST00000502555 LPIN2Q92539 896 aa16.47■□□□□ 0.23
SGCA-203ENST00000502555 CELF1Q92879 486 aaKnown RBP16.47■□□□□ 0.23
SGCA-203ENST00000502555 NEUROD6Q96NK8 337 aa16.47■□□□□ 0.23
SGCA-203ENST00000502555 HOXA10P31260 410 aaPredicted RBP16.46■□□□□ 0.23
SGCA-203ENST00000502555 TIMM10P62072 90 aa16.46■□□□□ 0.23
SGCA-203ENST00000502555 CHRNDQ07001 517 aa16.46■□□□□ 0.23
SGCA-203ENST00000502555 CASC1Q6TDU7 716 aa16.46■□□□□ 0.23
SGCA-203ENST00000502555 CNTROBQ8N137 903 aa16.46■□□□□ 0.23
SGCA-203ENST00000502555 RBM17Q96I25 401 aaKnown RBP16.46■□□□□ 0.23
SGCA-203ENST00000502555 TRIM6-TRIM34B2RNG4 842 aa16.45■□□□□ 0.22
SGCA-203ENST00000502555 SLC5A1P13866 664 aa16.45■□□□□ 0.22
SGCA-203ENST00000502555 FGFR2P21802 821 aa16.45■□□□□ 0.22
SGCA-203ENST00000502555 PDE6BP35913 854 aa16.45■□□□□ 0.22
SGCA-203ENST00000502555 TBC1D9Q6ZT07 1266 aa16.45■□□□□ 0.22
SGCA-203ENST00000502555 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.45■□□□□ 0.22
SGCA-203ENST00000502555 XAGE2Q96GT9 111 aa16.45■□□□□ 0.22
SGCA-203ENST00000502555 CRAMP1Q96RY5 1269 aa16.45■□□□□ 0.22
SGCA-203ENST00000502555 COL4A1P02462 1669 aa16.45■□□□□ 0.22
SGCA-203ENST00000502555 CASZ1Q86V15 1759 aa16.45■□□□□ 0.22
SGCA-203ENST00000502555 CCDC158Q5M9N0 1113 aa16.45■□□□□ 0.22
SGCA-203ENST00000502555 GORABQ5T7V8 394 aa16.45■□□□□ 0.22
SGCA-203ENST00000502555 ANKRD2Q9GZV1 360 aa16.45■□□□□ 0.22
SGCA-203ENST00000502555 MINPP1Q9UNW1 487 aa16.45■□□□□ 0.22
SGCA-203ENST00000502555 IFIT1P09914 478 aaKnown RBP16.44■□□□□ 0.22
SGCA-203ENST00000502555 TMC4Q7Z404 712 aa16.44■□□□□ 0.22
SGCA-203ENST00000502555 HELBQ8NG08 1087 aaPredicted RBP16.44■□□□□ 0.22
SGCA-203ENST00000502555 RILPL2Q969X0 211 aa16.44■□□□□ 0.22
SGCA-203ENST00000502555 EVI5LQ96CN4 794 aa16.44■□□□□ 0.22
SGCA-203ENST00000502555 ZNF512BQ96KM6 892 aaPredicted RBP16.44■□□□□ 0.22
SGCA-203ENST00000502555 HAUS7Q99871 368 aa16.44■□□□□ 0.22
SGCA-203ENST00000502555 BBOX1O75936 387 aa16.43■□□□□ 0.22
SGCA-203ENST00000502555 NPR1P16066 1061 aa16.43■□□□□ 0.22
SGCA-203ENST00000502555 ADORA1P30542 326 aa16.43■□□□□ 0.22
SGCA-203ENST00000502555 UBE4AQ14139 1066 aa16.43■□□□□ 0.22
SGCA-203ENST00000502555 BOLA2Q9H3K6 86 aa16.43■□□□□ 0.22
SGCA-203ENST00000502555 UPF2Q9HAU5 1272 aaKnown RBP16.43■□□□□ 0.22
SGCA-203ENST00000502555 RFX7Q2KHR2 1363 aa16.42■□□□□ 0.22
SGCA-203ENST00000502555 TAF5LO75529 589 aa16.42■□□□□ 0.22
SGCA-203ENST00000502555 SRGNP10124 158 aa16.42■□□□□ 0.22
SGCA-203ENST00000502555 TTC39AQ5SRH9 613 aa16.42■□□□□ 0.22
SGCA-203ENST00000502555 TICAM2Q86XR7 235 aa16.42■□□□□ 0.22
SGCA-203ENST00000502555 ARAP2Q8WZ64 1704 aa16.42■□□□□ 0.22
SGCA-203ENST00000502555 UQCRFS1P1P0C7P4 283 aa16.41■□□□□ 0.22
SGCA-203ENST00000502555 PDGFDQ9GZP0 370 aaPredicted RBP16.41■□□□□ 0.22
SGCA-203ENST00000502555 RBM19Q9Y4C8 960 aaKnown RBP16.41■□□□□ 0.22
SGCA-203ENST00000502555 ANKRD31Q8N7Z5 1873 aa16.4■□□□□ 0.22
SGCA-203ENST00000502555 SPEF2Q9C093 1822 aa16.4■□□□□ 0.22
SGCA-203ENST00000502555 HIP1O00291 1037 aa16.4■□□□□ 0.22
SGCA-203ENST00000502555 MAP4K4O95819 1239 aaPredicted RBP16.4■□□□□ 0.22
SGCA-203ENST00000502555 CHMLP26374 656 aa16.4■□□□□ 0.22
SGCA-203ENST00000502555 MASTLQ96GX5 879 aa16.4■□□□□ 0.22
SGCA-203ENST00000502555 C10orf71Q711Q0 1435 aa16.39■□□□□ 0.21
SGCA-203ENST00000502555 SEC24BO95487 1268 aa16.39■□□□□ 0.21
SGCA-203ENST00000502555 ARID4AP29374 1257 aaPredicted RBP16.39■□□□□ 0.21
SGCA-203ENST00000502555 ALDH1B1P30837 517 aa16.39■□□□□ 0.21
SGCA-203ENST00000502555 KCNJ4P48050 445 aa16.39■□□□□ 0.21
SGCA-203ENST00000502555 CCDC102BQ68D86 513 aa16.39■□□□□ 0.21
SGCA-203ENST00000502555 STYK1Q6J9G0 422 aa16.39■□□□□ 0.21
SGCA-203ENST00000502555 MTFR1LQ9H019 292 aa16.39■□□□□ 0.21
SGCA-203ENST00000502555 A0A1B0GUL6 1792 aa16.38■□□□□ 0.21
SGCA-203ENST00000502555 XDHP47989 1333 aa16.38■□□□□ 0.21
SGCA-203ENST00000502555 DNAJC2Q99543 621 aaKnown RBP16.38■□□□□ 0.21
SGCA-203ENST00000502555 FSD1Q9BTV5 496 aa16.38■□□□□ 0.21
SGCA-203ENST00000502555 PAG1Q9NWQ8 432 aa16.38■□□□□ 0.21
SGCA-203ENST00000502555 LEMD3Q9Y2U8 911 aa16.38■□□□□ 0.21
SGCA-203ENST00000502555 ZNF804BA4D1E1 1349 aa16.37■□□□□ 0.21
SGCA-203ENST00000502555 H0YIN7 160 aa16.37■□□□□ 0.21
SGCA-203ENST00000502555 PPEF1O14829 653 aaPredicted RBP16.37■□□□□ 0.21
SGCA-203ENST00000502555 PHKA1P46020 1223 aa16.37■□□□□ 0.21
SGCA-203ENST00000502555 MFAP1P55081 439 aaKnown RBP16.37■□□□□ 0.21
SGCA-203ENST00000502555 C2CD5Q86YS7 1000 aa16.37■□□□□ 0.21
SGCA-203ENST00000502555 KBTBD3Q8NAB2 608 aa16.37■□□□□ 0.21
SGCA-203ENST00000502555 ESYT1Q9BSJ8 1104 aa16.37■□□□□ 0.21
SGCA-203ENST00000502555 DIAPH3Q9NSV4 1193 aa16.37■□□□□ 0.21
SGCA-203ENST00000502555 SNAP23O00161 211 aa16.36■□□□□ 0.21
SGCA-203ENST00000502555 ZBTB22O15209 634 aa16.36■□□□□ 0.21
SGCA-203ENST00000502555 REC8O95072 547 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms