RNA–Protein interactions for RNA: ENST00000502066.6

CRNDE-202, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-202ENST00000502066 CHRNA2Q15822 529 aa10.62□□□□□ -0.71
CRNDE-202ENST00000502066 DZIP3Q86Y13 1208 aaKnown RBP10.62□□□□□ -0.71
CRNDE-202ENST00000502066 CASP8AP2Q9UKL3 1982 aa10.62□□□□□ -0.71
CRNDE-202ENST00000502066 PKD1L3Q7Z443 1732 aa10.61□□□□□ -0.71
CRNDE-202ENST00000502066 RHOQP17081 205 aa10.61□□□□□ -0.71
CRNDE-202ENST00000502066 NBPF20Q3BBV1 942 aa10.61□□□□□ -0.71
CRNDE-202ENST00000502066 PRICKLE2Q7Z3G6 844 aa10.61□□□□□ -0.71
CRNDE-202ENST00000502066 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.61□□□□□ -0.71
CRNDE-202ENST00000502066 PRDM6Q9NQX0 595 aa10.61□□□□□ -0.71
CRNDE-202ENST00000502066 KANK1Q14678 1352 aa10.61□□□□□ -0.71
CRNDE-202ENST00000502066 TUBGCP6Q96RT7 1819 aa10.61□□□□□ -0.71
CRNDE-202ENST00000502066 GAS6Q14393 721 aa10.6□□□□□ -0.71
CRNDE-202ENST00000502066 FAM117AQ9C073 453 aa10.6□□□□□ -0.71
CRNDE-202ENST00000502066 CYLDQ9NQC7 956 aa10.6□□□□□ -0.71
CRNDE-202ENST00000502066 TFCP2L1Q9NZI6 479 aa10.6□□□□□ -0.71
CRNDE-202ENST00000502066 GPSM3Q9Y4H4 160 aa10.6□□□□□ -0.71
CRNDE-202ENST00000502066 FMN2Q9NZ56 1722 aa10.6□□□□□ -0.71
CRNDE-202ENST00000502066 PPP2R2DQ66LE6 453 aa10.59□□□□□ -0.71
CRNDE-202ENST00000502066 LARP1Q6PKG0 1096 aaKnown RBP10.59□□□□□ -0.71
CRNDE-202ENST00000502066 LYSMD3Q7Z3D4 306 aa10.59□□□□□ -0.71
CRNDE-202ENST00000502066 SBNO1A3KN83 1393 aa10.59□□□□□ -0.71
CRNDE-202ENST00000502066 KIF1AQ12756 1690 aa10.59□□□□□ -0.71
CRNDE-202ENST00000502066 HFM1A2PYH4 1435 aa10.58□□□□□ -0.72
CRNDE-202ENST00000502066 CDC42BPGQ6DT37 1551 aa10.58□□□□□ -0.72
CRNDE-202ENST00000502066 VEGFAP15692 232 aaPredicted RBP10.58□□□□□ -0.72
CRNDE-202ENST00000502066 PLA2G5P39877 138 aa10.58□□□□□ -0.72
CRNDE-202ENST00000502066 SH3D19Q5HYK7 790 aa10.58□□□□□ -0.72
CRNDE-202ENST00000502066 LRRC4BQ9NT99 713 aa10.58□□□□□ -0.72
CRNDE-202ENST00000502066 DNMT3AQ9Y6K1 912 aaPredicted RBP10.58□□□□□ -0.72
CRNDE-202ENST00000502066 GPR25O00155 361 aa10.57□□□□□ -0.72
CRNDE-202ENST00000502066 CELA2BP08218 269 aaPredicted RBP10.57□□□□□ -0.72
CRNDE-202ENST00000502066 RAPGEFL1Q9UHV5 662 aa10.57□□□□□ -0.72
CRNDE-202ENST00000502066 SSH2Q76I76 1423 aa10.57□□□□□ -0.72
CRNDE-202ENST00000502066 SRSF11Q05519 484 aaKnown RBP10.56□□□□□ -0.72
CRNDE-202ENST00000502066 FAM122AQ96E09 287 aa10.56□□□□□ -0.72
CRNDE-202ENST00000502066 KDM4CQ9H3R0 1056 aa10.56□□□□□ -0.72
CRNDE-202ENST00000502066 USP17L8P0C7I0 530 aa10.55□□□□□ -0.72
CRNDE-202ENST00000502066 MAP3K10Q02779 954 aa10.55□□□□□ -0.72
CRNDE-202ENST00000502066 DDB1Q16531 1140 aa10.55□□□□□ -0.72
CRNDE-202ENST00000502066 MARCH10Q8NA82 808 aaPredicted RBP10.55□□□□□ -0.72
CRNDE-202ENST00000502066 SCARF2Q96GP6 870 aaPredicted RBP10.55□□□□□ -0.72
CRNDE-202ENST00000502066 BCS1LQ9Y276 419 aa10.55□□□□□ -0.72
CRNDE-202ENST00000502066 THRAP3Q9Y2W1 955 aaKnown RBP10.55□□□□□ -0.72
CRNDE-202ENST00000502066 ESPNB1AK53 854 aa10.54□□□□□ -0.72
CRNDE-202ENST00000502066 KIAA0232Q92628 1395 aa10.53□□□□□ -0.72
CRNDE-202ENST00000502066 KANK3Q6NY19 840 aa10.53□□□□□ -0.72
CRNDE-202ENST00000502066 RIPOR1Q6ZS17 1223 aa10.53□□□□□ -0.72
CRNDE-202ENST00000502066 HIRIP3Q9BW71 556 aaPredicted RBP10.53□□□□□ -0.72
CRNDE-202ENST00000502066 RNF181Q9P0P0 153 aa10.53□□□□□ -0.72
CRNDE-202ENST00000502066 LRRC37A3O60309 1634 aa10.53□□□□□ -0.72
CRNDE-202ENST00000502066 WDR33Q9C0J8 1336 aaKnown RBP10.53□□□□□ -0.72
CRNDE-202ENST00000502066 MEN1O00255 615 aa10.52□□□□□ -0.73
CRNDE-202ENST00000502066 DBN1Q16643 649 aa10.52□□□□□ -0.73
CRNDE-202ENST00000502066 ZNF837Q96EG3 531 aaPredicted RBP10.52□□□□□ -0.73
CRNDE-202ENST00000502066 CNTNAP5Q8WYK1 1306 aa10.52□□□□□ -0.73
CRNDE-202ENST00000502066 RNF144AP50876 292 aaPredicted RBP10.51□□□□□ -0.73
CRNDE-202ENST00000502066 DEFB115Q30KQ5 88 aa10.51□□□□□ -0.73
CRNDE-202ENST00000502066 COL23A1Q86Y22 540 aaPredicted RBP10.51□□□□□ -0.73
CRNDE-202ENST00000502066 PNMA1Q8ND90 353 aa10.51□□□□□ -0.73
CRNDE-202ENST00000502066 AKAP12Q02952 1782 aa10.51□□□□□ -0.73
CRNDE-202ENST00000502066 BRD4O60885 1362 aaPredicted RBP10.51□□□□□ -0.73
CRNDE-202ENST00000502066 NAIPQ13075 1403 aa10.5□□□□□ -0.73
CRNDE-202ENST00000502066 BCL9O00512 1426 aa10.5□□□□□ -0.73
CRNDE-202ENST00000502066 RGPD8O14715 1765 aaPredicted RBP10.49□□□□□ -0.73
CRNDE-202ENST00000502066 TMEM88BA6NKF7 163 aa10.49□□□□□ -0.73
CRNDE-202ENST00000502066 ATP5J2-PTCD1G3V325 749 aa10.49□□□□□ -0.73
CRNDE-202ENST00000502066 POU4F2Q12837 409 aa10.49□□□□□ -0.73
CRNDE-202ENST00000502066 TRIM22Q8IYM9 498 aa10.49□□□□□ -0.73
CRNDE-202ENST00000502066 DDRGK1Q96HY6 314 aa10.49□□□□□ -0.73
CRNDE-202ENST00000502066 GAS2L1Q99501 681 aaPredicted RBP10.49□□□□□ -0.73
CRNDE-202ENST00000502066 CASKIN1Q8WXD9 1431 aa10.49□□□□□ -0.73
CRNDE-202ENST00000502066 IGHA1P01876 353 aa10.48□□□□□ -0.73
CRNDE-202ENST00000502066 RFC5P40937 340 aa10.48□□□□□ -0.73
CRNDE-202ENST00000502066 ZC3H6P61129 1189 aaKnown RBP10.48□□□□□ -0.73
CRNDE-202ENST00000502066 GTPBP3Q969Y2 492 aaKnown RBP10.48□□□□□ -0.73
CRNDE-202ENST00000502066 TRIM34Q9BYJ4 488 aa10.48□□□□□ -0.73
CRNDE-202ENST00000502066 PCDHB9Q9Y5E1 797 aa10.48□□□□□ -0.73
CRNDE-202ENST00000502066 LTBP1Q14766 1721 aa10.47□□□□□ -0.73
CRNDE-202ENST00000502066 CRYBG1Q9Y4K1 1723 aa10.47□□□□□ -0.73
CRNDE-202ENST00000502066 A0A1W2PRU2 124 aa10.47□□□□□ -0.73
CRNDE-202ENST00000502066 KCNQ4P56696 695 aa10.47□□□□□ -0.73
CRNDE-202ENST00000502066 ENAMQ9NRM1 1142 aa10.47□□□□□ -0.73
CRNDE-202ENST00000502066 MBIPQ9NS73 344 aa10.47□□□□□ -0.73
CRNDE-202ENST00000502066 RASSF10A6NK89 507 aa10.46□□□□□ -0.73
CRNDE-202ENST00000502066 ACSBG1Q96GR2 724 aa10.46□□□□□ -0.73
CRNDE-202ENST00000502066 TRIOBPQ9H2D6 2365 aa10.46□□□□□ -0.74
CRNDE-202ENST00000502066 PRR36Q9H6K5 1346 aa10.45□□□□□ -0.74
CRNDE-202ENST00000502066 FOXK2Q01167 660 aa10.45□□□□□ -0.74
CRNDE-202ENST00000502066 FOXR1Q6PIV2 292 aa10.45□□□□□ -0.74
CRNDE-202ENST00000502066 NEDD1Q8NHV4 660 aa10.45□□□□□ -0.74
CRNDE-202ENST00000502066 ALS2Q96Q42 1657 aa10.44□□□□□ -0.74
CRNDE-202ENST00000502066 UNC80Q8N2C7 3258 aa10.44□□□□□ -0.74
CRNDE-202ENST00000502066 PASKQ96RG2 1323 aa10.44□□□□□ -0.74
CRNDE-202ENST00000502066 PLA2G4EQ3MJ16 856 aa10.44□□□□□ -0.74
CRNDE-202ENST00000502066 SLC27A3Q5K4L6 730 aa10.44□□□□□ -0.74
CRNDE-202ENST00000502066 ACDQ96AP0 544 aa10.44□□□□□ -0.74
CRNDE-202ENST00000502066 DCAF5Q96JK2 942 aa10.44□□□□□ -0.74
CRNDE-202ENST00000502066 N4BP2Q86UW6 1770 aaPredicted RBP10.44□□□□□ -0.74
CRNDE-202ENST00000502066 PIK3C2AO00443 1686 aa10.44□□□□□ -0.74
CRNDE-202ENST00000502066 NHSQ6T4R5 1651 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms