RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 USP38Q8NB14 1042 aa6.94□□□□□ -1.3
CSTF1-207ENST00000498689 ZC3H15Q8WU90 426 aaKnown RBP6.94□□□□□ -1.3
CSTF1-207ENST00000498689 MASTLQ96GX5 879 aa6.94□□□□□ -1.3
CSTF1-207ENST00000498689 CFHR5Q9BXR6 569 aa6.94□□□□□ -1.3
CSTF1-207ENST00000498689 PTCH2Q9Y6C5 1203 aa6.94□□□□□ -1.3
CSTF1-207ENST00000498689 SSC5DA1L4H1 1573 aa6.94□□□□□ -1.3
CSTF1-207ENST00000498689 COL15A1P39059 1388 aa6.94□□□□□ -1.3
CSTF1-207ENST00000498689 SBNO2Q9Y2G9 1366 aa6.94□□□□□ -1.3
CSTF1-207ENST00000498689 SLC9C1Q4G0N8 1177 aa6.93□□□□□ -1.3
CSTF1-207ENST00000498689 KRT26Q7Z3Y9 468 aa6.93□□□□□ -1.3
CSTF1-207ENST00000498689 SH3TC2Q8TF17 1288 aa6.93□□□□□ -1.3
CSTF1-207ENST00000498689 MYO15AQ9UKN7 3530 aa6.92□□□□□ -1.3
CSTF1-207ENST00000498689 MTFR1Q15390 333 aa6.92□□□□□ -1.3
CSTF1-207ENST00000498689 DOK7Q18PE1 504 aa6.92□□□□□ -1.3
CSTF1-207ENST00000498689 RTKN2Q8IZC4 609 aa6.92□□□□□ -1.3
CSTF1-207ENST00000498689 TDHQ8IZJ6 230 aa6.92□□□□□ -1.3
CSTF1-207ENST00000498689 MYLIPQ8WY64 445 aa6.92□□□□□ -1.3
CSTF1-207ENST00000498689 HTATIP2Q9BUP3 242 aa6.92□□□□□ -1.3
CSTF1-207ENST00000498689 EFCC1Q9HA90 598 aa6.92□□□□□ -1.3
CSTF1-207ENST00000498689 PDZRN3Q9UPQ7 1066 aa6.92□□□□□ -1.3
CSTF1-207ENST00000498689 COL2A1P02458 1487 aaPredicted RBP6.92□□□□□ -1.3
CSTF1-207ENST00000498689 CHD9Q3L8U1 2897 aa6.91□□□□□ -1.3
CSTF1-207ENST00000498689 EVI5O60447 810 aa6.91□□□□□ -1.3
CSTF1-207ENST00000498689 CXCL9Q07325 125 aa6.91□□□□□ -1.3
CSTF1-207ENST00000498689 SAMD7Q7Z3H4 446 aa6.91□□□□□ -1.3
CSTF1-207ENST00000498689 LARGE2Q8N3Y3 721 aa6.91□□□□□ -1.3
CSTF1-207ENST00000498689 ADAMTS19Q8TE59 1207 aa6.91□□□□□ -1.3
CSTF1-207ENST00000498689 NECAB3Q96P71 396 aaPredicted RBP6.91□□□□□ -1.3
CSTF1-207ENST00000498689 NPC1L1Q9UHC9 1359 aa6.91□□□□□ -1.3
CSTF1-207ENST00000498689 MGAMO43451 1857 aa6.9□□□□□ -1.3
CSTF1-207ENST00000498689 HOXB1P14653 301 aaPredicted RBP6.9□□□□□ -1.3
CSTF1-207ENST00000498689 AMPHP49418 695 aa6.9□□□□□ -1.3
CSTF1-207ENST00000498689 FAM109BQ6ICB4 259 aaPredicted RBP6.9□□□□□ -1.3
CSTF1-207ENST00000498689 DCAF11Q8TEB1 546 aa6.9□□□□□ -1.3
CSTF1-207ENST00000498689 PSMD1Q99460 953 aa6.9□□□□□ -1.3
CSTF1-207ENST00000498689 C1QTNF1Q9BXJ1 281 aa6.9□□□□□ -1.3
CSTF1-207ENST00000498689 EPHX3Q9H6B9 360 aa6.9□□□□□ -1.3
CSTF1-207ENST00000498689 ZMYND8Q9ULU4 1186 aaPredicted RBP6.9□□□□□ -1.3
CSTF1-207ENST00000498689 ASTN2O75129 1339 aaPredicted RBP6.9□□□□□ -1.3
CSTF1-207ENST00000498689 CENPJQ9HC77 1338 aaPredicted RBP6.9□□□□□ -1.3
CSTF1-207ENST00000498689 DMXL1Q9Y485 3027 aa6.89□□□□□ -1.31
CSTF1-207ENST00000498689 UBE2Q2LH0YL09 131 aa6.89□□□□□ -1.31
CSTF1-207ENST00000498689 PHKG2P15735 406 aa6.89□□□□□ -1.31
CSTF1-207ENST00000498689 SYN1P17600 705 aa6.89□□□□□ -1.31
CSTF1-207ENST00000498689 MAGEA10P43363 369 aaPredicted RBP6.89□□□□□ -1.31
CSTF1-207ENST00000498689 NBPF11Q86T75 865 aa6.89□□□□□ -1.31
CSTF1-207ENST00000498689 DNAJC10Q8IXB1 793 aa6.89□□□□□ -1.31
CSTF1-207ENST00000498689 CDCA5Q96FF9 252 aa6.89□□□□□ -1.31
CSTF1-207ENST00000498689 ERO1AQ96HE7 468 aa6.89□□□□□ -1.31
CSTF1-207ENST00000498689 UHRF1Q96T88 793 aaPredicted RBP6.89□□□□□ -1.31
CSTF1-207ENST00000498689 CNOT7Q9UIV1 285 aaKnown RBP6.89□□□□□ -1.31
CSTF1-207ENST00000498689 SCN9AQ15858 1988 aa6.89□□□□□ -1.31
CSTF1-207ENST00000498689 DMDP11532 3685 aa6.89□□□□□ -1.31
CSTF1-207ENST00000498689 ZNF292O60281 2723 aa6.88□□□□□ -1.31
CSTF1-207ENST00000498689 FAM86C2PA6NEL3 165 aa6.88□□□□□ -1.31
CSTF1-207ENST00000498689 RIMBP2O15034 1052 aa6.88□□□□□ -1.31
CSTF1-207ENST00000498689 RRS1Q15050 365 aaKnown RBP6.88□□□□□ -1.31
CSTF1-207ENST00000498689 TBC1D10BQ4KMP7 808 aaPredicted RBP6.88□□□□□ -1.31
CSTF1-207ENST00000498689 C11orf16Q9NQ32 467 aa6.88□□□□□ -1.31
CSTF1-207ENST00000498689 SCAF8Q9UPN6 1271 aaKnown RBP6.88□□□□□ -1.31
CSTF1-207ENST00000498689 ZBTB1Q9Y2K1 713 aa6.88□□□□□ -1.31
CSTF1-207ENST00000498689 DNAH14Q0VDD8 3507 aa6.88□□□□□ -1.31
CSTF1-207ENST00000498689 VPS13AQ96RL7 3174 aa6.88□□□□□ -1.31
CSTF1-207ENST00000498689 CHD7Q9P2D1 2997 aa6.88□□□□□ -1.31
CSTF1-207ENST00000498689 DDX60LQ5H9U9 1706 aaKnown RBP6.87□□□□□ -1.31
CSTF1-207ENST00000498689 TONSLQ96HA7 1378 aa6.87□□□□□ -1.31
CSTF1-207ENST00000498689 ZNF318Q5VUA4 2279 aa6.87□□□□□ -1.31
CSTF1-207ENST00000498689 IGF2BP3O00425 579 aaKnown RBP eCLIP6.87□□□□□ -1.31
CSTF1-207ENST00000498689 NPR1P16066 1061 aa6.87□□□□□ -1.31
CSTF1-207ENST00000498689 KCTD2Q14681 263 aa6.87□□□□□ -1.31
CSTF1-207ENST00000498689 AOC3Q16853 763 aa6.87□□□□□ -1.31
CSTF1-207ENST00000498689 VARS2Q5ST30 1063 aaKnown RBP6.87□□□□□ -1.31
CSTF1-207ENST00000498689 MICALL2Q8IY33 904 aa6.87□□□□□ -1.31
CSTF1-207ENST00000498689 CNBD1Q8NA66 436 aa6.87□□□□□ -1.31
CSTF1-207ENST00000498689 MPHOSPH9Q99550 1183 aa6.87□□□□□ -1.31
CSTF1-207ENST00000498689 BCL2L13Q9BXK5 485 aa6.87□□□□□ -1.31
CSTF1-207ENST00000498689 FASNP49327 2511 aaKnown RBP6.87□□□□□ -1.31
CSTF1-207ENST00000498689 ZFHX2Q9C0A1 2572 aaPredicted RBP6.86□□□□□ -1.31
CSTF1-207ENST00000498689 A0A1W2PP64 1363 aa6.86□□□□□ -1.31
CSTF1-207ENST00000498689 RAD17O75943 681 aa6.86□□□□□ -1.31
CSTF1-207ENST00000498689 FARP2O94887 1054 aaPredicted RBP6.86□□□□□ -1.31
CSTF1-207ENST00000498689 NHLH1Q02575 133 aa6.86□□□□□ -1.31
CSTF1-207ENST00000498689 HSP90AB2PQ58FF8 381 aa6.86□□□□□ -1.31
CSTF1-207ENST00000498689 ZNF697Q5TEC3 545 aa6.86□□□□□ -1.31
CSTF1-207ENST00000498689 NIM1KQ8IY84 436 aa6.86□□□□□ -1.31
CSTF1-207ENST00000498689 C7orf61Q8IZ16 206 aa6.86□□□□□ -1.31
CSTF1-207ENST00000498689 PHOX2BQ99453 314 aa6.86□□□□□ -1.31
CSTF1-207ENST00000498689 UBE2OQ9C0C9 1292 aaKnown RBP6.86□□□□□ -1.31
CSTF1-207ENST00000498689 SEMA6BQ9H3T3 888 aa6.86□□□□□ -1.31
CSTF1-207ENST00000498689 SPG7Q9UQ90 795 aa6.86□□□□□ -1.31
CSTF1-207ENST00000498689 UBR2Q8IWV8 1755 aa6.86□□□□□ -1.31
CSTF1-207ENST00000498689 TPRP12270 2363 aaKnown RBP6.86□□□□□ -1.31
CSTF1-207ENST00000498689 NCAPD2Q15021 1401 aa6.85□□□□□ -1.31
CSTF1-207ENST00000498689 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.85□□□□□ -1.31
CSTF1-207ENST00000498689 RIOK3O14730 519 aaKnown RBP6.85□□□□□ -1.31
CSTF1-207ENST00000498689 CYP19A1P11511 503 aaPredicted RBP6.85□□□□□ -1.31
CSTF1-207ENST00000498689 FOSL2P15408 326 aa6.85□□□□□ -1.31
CSTF1-207ENST00000498689 GJA8P48165 433 aa6.85□□□□□ -1.31
CSTF1-207ENST00000498689 SREBF2Q12772 1141 aa6.85□□□□□ -1.31
CSTF1-207ENST00000498689 CRHR2Q13324 411 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms