RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 TMEM31Q5JXX7 168 aa7.53□□□□□ -1.2
FXN-205ENST00000498653 INTS5Q6P9B9 1019 aaKnown RBP7.53□□□□□ -1.2
FXN-205ENST00000498653 C3orf67Q6ZVT6 689 aa7.53□□□□□ -1.2
FXN-205ENST00000498653 KRT26Q7Z3Y9 468 aa7.53□□□□□ -1.2
FXN-205ENST00000498653 MICALL2Q8IY33 904 aa7.53□□□□□ -1.2
FXN-205ENST00000498653 MASTLQ96GX5 879 aa7.53□□□□□ -1.2
FXN-205ENST00000498653 ERO1AQ96HE7 468 aa7.53□□□□□ -1.2
FXN-205ENST00000498653 EPHX3Q9H6B9 360 aa7.53□□□□□ -1.2
FXN-205ENST00000498653 EFCC1Q9HA90 598 aa7.53□□□□□ -1.2
FXN-205ENST00000498653 DACH1Q9UI36 760 aa7.53□□□□□ -1.2
FXN-205ENST00000498653 TRANK1O15050 2925 aa7.53□□□□□ -1.2
FXN-205ENST00000498653 CDHR2Q9BYE9 1310 aa7.52□□□□□ -1.2
FXN-205ENST00000498653 SHTN1A0MZ66 631 aa7.52□□□□□ -1.21
FXN-205ENST00000498653 HOXC9P31274 260 aa7.52□□□□□ -1.21
FXN-205ENST00000498653 MAGEA10P43363 369 aaPredicted RBP7.52□□□□□ -1.21
FXN-205ENST00000498653 GMPSP49915 693 aaPredicted RBP7.52□□□□□ -1.21
FXN-205ENST00000498653 COL9A2Q14055 689 aaPredicted RBP7.52□□□□□ -1.21
FXN-205ENST00000498653 ZNF697Q5TEC3 545 aa7.52□□□□□ -1.21
FXN-205ENST00000498653 NBPF11Q86T75 865 aa7.52□□□□□ -1.21
FXN-205ENST00000498653 NME9Q86XW9 330 aa7.52□□□□□ -1.21
FXN-205ENST00000498653 RTKN2Q8IZC4 609 aa7.52□□□□□ -1.21
FXN-205ENST00000498653 SH3TC2Q8TF17 1288 aa7.52□□□□□ -1.21
FXN-205ENST00000498653 PSMD1Q99460 953 aa7.52□□□□□ -1.21
FXN-205ENST00000498653 NARFQ9UHQ1 456 aa7.52□□□□□ -1.21
FXN-205ENST00000498653 REV3LO60673 3130 aa7.52□□□□□ -1.21
FXN-205ENST00000498653 COL15A1P39059 1388 aa7.51□□□□□ -1.21
FXN-205ENST00000498653 TONSLQ96HA7 1378 aa7.51□□□□□ -1.21
FXN-205ENST00000498653 NECAB3Q96P71 396 aaPredicted RBP7.51□□□□□ -1.21
FXN-205ENST00000498653 TMEM121BQ9BXQ6 578 aaPredicted RBP7.51□□□□□ -1.21
FXN-205ENST00000498653 KIF7Q2M1P5 1343 aa7.51□□□□□ -1.21
FXN-205ENST00000498653 KTN1Q86UP2 1357 aaKnown RBP7.5□□□□□ -1.21
FXN-205ENST00000498653 RAB3GAP2Q9H2M9 1393 aa7.5□□□□□ -1.21
FXN-205ENST00000498653 NPC1L1Q9UHC9 1359 aa7.5□□□□□ -1.21
FXN-205ENST00000498653 TCF20Q9UGU0 1960 aaKnown RBP7.5□□□□□ -1.21
FXN-205ENST00000498653 FOSL2P15408 326 aa7.5□□□□□ -1.21
FXN-205ENST00000498653 MTFR1Q15390 333 aa7.5□□□□□ -1.21
FXN-205ENST00000498653 MAMSTRQ6ZN01 415 aa7.5□□□□□ -1.21
FXN-205ENST00000498653 ASB2Q96Q27 587 aa7.5□□□□□ -1.21
FXN-205ENST00000498653 ZMYND8Q9ULU4 1186 aaPredicted RBP7.5□□□□□ -1.21
FXN-205ENST00000498653 MAST4O15021 2626 aa7.5□□□□□ -1.21
FXN-205ENST00000498653 FASNP49327 2511 aaKnown RBP7.49□□□□□ -1.21
FXN-205ENST00000498653 SBNO2Q9Y2G9 1366 aa7.49□□□□□ -1.21
FXN-205ENST00000498653 FARP2O94887 1054 aaPredicted RBP7.49□□□□□ -1.21
FXN-205ENST00000498653 PDE4AP27815 886 aa7.49□□□□□ -1.21
FXN-205ENST00000498653 GJA8P48165 433 aa7.49□□□□□ -1.21
FXN-205ENST00000498653 SREBF2Q12772 1141 aa7.49□□□□□ -1.21
FXN-205ENST00000498653 ATXN2LQ8WWM7 1075 aaKnown RBP7.49□□□□□ -1.21
FXN-205ENST00000498653 WDR70Q9NW82 654 aa7.49□□□□□ -1.21
FXN-205ENST00000498653 NCAPD2Q15021 1401 aa7.49□□□□□ -1.21
FXN-205ENST00000498653 FAM86C2PA6NEL3 165 aa7.48□□□□□ -1.21
FXN-205ENST00000498653 ST18O60284 1047 aa7.48□□□□□ -1.21
FXN-205ENST00000498653 GPR37L1O60883 481 aa7.48□□□□□ -1.21
FXN-205ENST00000498653 EGFRP00533 1210 aa7.48□□□□□ -1.21
FXN-205ENST00000498653 MOB2Q70IA6 237 aa7.48□□□□□ -1.21
FXN-205ENST00000498653 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.48□□□□□ -1.21
FXN-205ENST00000498653 TMC2Q8TDI7 906 aa7.48□□□□□ -1.21
FXN-205ENST00000498653 CDCA5Q96FF9 252 aa7.48□□□□□ -1.21
FXN-205ENST00000498653 TTYH1Q9H313 450 aaPredicted RBP7.48□□□□□ -1.21
FXN-205ENST00000498653 SEMA6BQ9H3T3 888 aa7.48□□□□□ -1.21
FXN-205ENST00000498653 SCUBE2Q9NQ36 999 aa7.48□□□□□ -1.21
FXN-205ENST00000498653 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.48□□□□□ -1.21
FXN-205ENST00000498653 GPR179Q6PRD1 2367 aa7.48□□□□□ -1.21
FXN-205ENST00000498653 KIF24Q5T7B8 1368 aa7.47□□□□□ -1.21
FXN-205ENST00000498653 CXCL9Q07325 125 aa7.47□□□□□ -1.21
FXN-205ENST00000498653 TBC1D9BQ66K14 1250 aa7.47□□□□□ -1.21
FXN-205ENST00000498653 SLC51AQ86UW1 340 aa7.47□□□□□ -1.21
FXN-205ENST00000498653 LARGE2Q8N3Y3 721 aa7.47□□□□□ -1.21
FXN-205ENST00000498653 UBE2OQ9C0C9 1292 aaKnown RBP7.47□□□□□ -1.21
FXN-205ENST00000498653 TAF1P21675 1872 aa7.47□□□□□ -1.21
FXN-205ENST00000498653 RTL1A6NKG5 1358 aa7.46□□□□□ -1.21
FXN-205ENST00000498653 ALDH1A1P00352 501 aa7.46□□□□□ -1.22
FXN-205ENST00000498653 FKBP1BP68106 108 aa7.46□□□□□ -1.22
FXN-205ENST00000498653 NKX2-3Q8TAU0 364 aa7.46□□□□□ -1.22
FXN-205ENST00000498653 PHOX2BQ99453 314 aa7.46□□□□□ -1.22
FXN-205ENST00000498653 A0A1W2PP64 1363 aa7.46□□□□□ -1.22
FXN-205ENST00000498653 TPRP12270 2363 aaKnown RBP7.45□□□□□ -1.22
FXN-205ENST00000498653 IGF2BP3O00425 579 aaKnown RBP eCLIP7.45□□□□□ -1.22
FXN-205ENST00000498653 GJB1P08034 283 aa7.45□□□□□ -1.22
FXN-205ENST00000498653 SYN1P17600 705 aa7.45□□□□□ -1.22
FXN-205ENST00000498653 ITGAEP38570 1179 aa7.45□□□□□ -1.22
FXN-205ENST00000498653 NIM1KQ8IY84 436 aa7.45□□□□□ -1.22
FXN-205ENST00000498653 C7orf61Q8IZ16 206 aa7.45□□□□□ -1.22
FXN-205ENST00000498653 THEGQ9P2T0 379 aa7.45□□□□□ -1.22
FXN-205ENST00000498653 DNAH14Q0VDD8 3507 aa7.45□□□□□ -1.22
FXN-205ENST00000498653 MYO15AQ9UKN7 3530 aa7.45□□□□□ -1.22
FXN-205ENST00000498653 RIC1Q4ADV7 1423 aa7.44□□□□□ -1.22
FXN-205ENST00000498653 ZNF318Q5VUA4 2279 aa7.44□□□□□ -1.22
FXN-205ENST00000498653 COL3A1P02461 1466 aaPredicted RBP7.44□□□□□ -1.22
FXN-205ENST00000498653 NPR1P16066 1061 aa7.44□□□□□ -1.22
FXN-205ENST00000498653 ITGB8P26012 769 aa7.44□□□□□ -1.22
FXN-205ENST00000498653 SP3Q02447 781 aa7.44□□□□□ -1.22
FXN-205ENST00000498653 TRIM26Q12899 539 aaPredicted RBP7.44□□□□□ -1.22
FXN-205ENST00000498653 CRHR2Q13324 411 aa7.44□□□□□ -1.22
FXN-205ENST00000498653 CNBD1Q8NA66 436 aa7.44□□□□□ -1.22
FXN-205ENST00000498653 KHSRPQ92945 711 aaKnown RBP eCLIP7.44□□□□□ -1.22
FXN-205ENST00000498653 FBXL18Q96ME1 805 aa7.44□□□□□ -1.22
FXN-205ENST00000498653 LARP6Q9BRS8 491 aaKnown RBP7.44□□□□□ -1.22
FXN-205ENST00000498653 GPHNQ9NQX3 736 aaPredicted RBP7.44□□□□□ -1.22
FXN-205ENST00000498653 ZNF292O60281 2723 aa7.43□□□□□ -1.22
FXN-205ENST00000498653 UBE2Q2LH0YL09 131 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms