RNA–Protein interactions for RNA: ENST00000498595.5

HDLBP-247, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-247ENST00000498595 DPF2Q92785 391 aa18.53■□□□□ 0.56
HDLBP-247ENST00000498595 PODXL2Q9NZ53 605 aa18.53■□□□□ 0.56
HDLBP-247ENST00000498595 TRAF5O00463 557 aa18.52■□□□□ 0.56
HDLBP-247ENST00000498595 PSMD14O00487 310 aa18.52■□□□□ 0.56
HDLBP-247ENST00000498595 ECE1P42892 770 aa18.52■□□□□ 0.56
HDLBP-247ENST00000498595 CTSWP56202 376 aa18.52■□□□□ 0.56
HDLBP-247ENST00000498595 XDHP47989 1333 aa18.51■□□□□ 0.55
HDLBP-247ENST00000498595 FANCIQ9NVI1 1328 aa18.51■□□□□ 0.55
HDLBP-247ENST00000498595 IGKV5-2P06315 115 aa18.51■□□□□ 0.55
HDLBP-247ENST00000498595 FLIIQ13045 1269 aa18.51■□□□□ 0.55
HDLBP-247ENST00000498595 FKBP5Q13451 457 aaPredicted RBP18.51■□□□□ 0.55
HDLBP-247ENST00000498595 MYH16Q9H6N6 1097 aa18.51■□□□□ 0.55
HDLBP-247ENST00000498595 ZBTB12Q9Y330 459 aaPredicted RBP18.51■□□□□ 0.55
HDLBP-247ENST00000498595 TAF1P21675 1872 aa18.51■□□□□ 0.55
HDLBP-247ENST00000498595 WDR33Q9C0J8 1336 aaKnown RBP18.5■□□□□ 0.55
HDLBP-247ENST00000498595 NEURL1BA8MQ27 555 aa18.5■□□□□ 0.55
HDLBP-247ENST00000498595 CTCFP49711 727 aaPredicted RBP18.5■□□□□ 0.55
HDLBP-247ENST00000498595 MAP2K1Q02750 393 aaPredicted RBP18.5■□□□□ 0.55
HDLBP-247ENST00000498595 CWF19L2Q2TBE0 894 aaKnown RBP18.5■□□□□ 0.55
HDLBP-247ENST00000498595 CDC37L1Q7L3B6 337 aa18.5■□□□□ 0.55
HDLBP-247ENST00000498595 TRPM4Q8TD43 1214 aa18.5■□□□□ 0.55
HDLBP-247ENST00000498595 GPR101Q96P66 508 aaPredicted RBP18.5■□□□□ 0.55
HDLBP-247ENST00000498595 CELF2O95319 508 aaKnown RBP18.49■□□□□ 0.55
HDLBP-247ENST00000498595 FMR1Q06787 632 aaKnown RBP eCLIP18.49■□□□□ 0.55
HDLBP-247ENST00000498595 GRM1Q13255 1194 aa18.49■□□□□ 0.55
HDLBP-247ENST00000498595 G2E3Q7L622 706 aa18.49■□□□□ 0.55
HDLBP-247ENST00000498595 UBE3BQ7Z3V4 1068 aa18.49■□□□□ 0.55
HDLBP-247ENST00000498595 BEGAINQ9BUH8 593 aa18.49■□□□□ 0.55
HDLBP-247ENST00000498595 GLIS2Q9BZE0 524 aaPredicted RBP18.49■□□□□ 0.55
HDLBP-247ENST00000498595 PGAP2Q9UHJ9 254 aa18.49■□□□□ 0.55
HDLBP-247ENST00000498595 FOXN1O15353 648 aa18.48■□□□□ 0.55
HDLBP-247ENST00000498595 ATP2B4P23634 1241 aa18.48■□□□□ 0.55
HDLBP-247ENST00000498595 FAM9BQ8IZU0 186 aa18.48■□□□□ 0.55
HDLBP-247ENST00000498595 TTLL11Q8NHH1 800 aa18.48■□□□□ 0.55
HDLBP-247ENST00000498595 DNAAF4Q8WXU2 420 aa18.48■□□□□ 0.55
HDLBP-247ENST00000498595 CAPNS2Q96L46 248 aa18.48■□□□□ 0.55
HDLBP-247ENST00000498595 ZNF408Q9H9D4 720 aa18.48■□□□□ 0.55
HDLBP-247ENST00000498595 TLL2Q9Y6L7 1015 aa18.48■□□□□ 0.55
HDLBP-247ENST00000498595 PCNTO95613 3336 aa18.48■□□□□ 0.55
HDLBP-247ENST00000498595 IGHMBP2P38935 993 aaKnown RBP18.47■□□□□ 0.55
HDLBP-247ENST00000498595 HIRAP54198 1017 aaPredicted RBP18.47■□□□□ 0.55
HDLBP-247ENST00000498595 EXOSC9Q06265 439 aaKnown RBP18.47■□□□□ 0.55
HDLBP-247ENST00000498595 TBC1D10BQ4KMP7 808 aaPredicted RBP18.47■□□□□ 0.55
HDLBP-247ENST00000498595 CST9Q5W186 159 aa18.47■□□□□ 0.55
HDLBP-247ENST00000498595 GREM2Q9H772 168 aa18.47■□□□□ 0.55
HDLBP-247ENST00000498595 WBP1LQ9NX94 342 aa18.47■□□□□ 0.55
HDLBP-247ENST00000498595 RTL9Q8NET4 1388 aa18.46■□□□□ 0.55
HDLBP-247ENST00000498595 SHTN1A0MZ66 631 aa18.46■□□□□ 0.55
HDLBP-247ENST00000498595 H7C1W4 665 aa18.46■□□□□ 0.55
HDLBP-247ENST00000498595 GCKRQ14397 625 aa18.46■□□□□ 0.55
HDLBP-247ENST00000498595 RBM26Q5T8P6 1007 aaKnown RBP18.46■□□□□ 0.55
HDLBP-247ENST00000498595 SAMD7Q7Z3H4 446 aa18.46■□□□□ 0.55
HDLBP-247ENST00000498595 LINS1Q8NG48 757 aa18.46■□□□□ 0.55
HDLBP-247ENST00000498595 DCPSQ96C86 337 aaKnown RBP18.46■□□□□ 0.55
HDLBP-247ENST00000498595 KCNQ5Q9NR82 932 aa18.46■□□□□ 0.55
HDLBP-247ENST00000498595 BSDC1Q9NW68 430 aaPredicted RBP18.46■□□□□ 0.55
HDLBP-247ENST00000498595 COL4A1P02462 1669 aa18.46■□□□□ 0.55
HDLBP-247ENST00000498595 VAMP4O75379 141 aa18.45■□□□□ 0.54
HDLBP-247ENST00000498595 CAPN15O75808 1086 aa18.45■□□□□ 0.54
HDLBP-247ENST00000498595 VIL1P09327 827 aaKnown RBP18.45■□□□□ 0.54
HDLBP-247ENST00000498595 CYP4F22Q6NT55 531 aa18.45■□□□□ 0.54
HDLBP-247ENST00000498595 KRT26Q7Z3Y9 468 aa18.45■□□□□ 0.54
HDLBP-247ENST00000498595 USP48Q86UV5 1035 aa18.45■□□□□ 0.54
HDLBP-247ENST00000498595 PRDM10Q9NQV6 1147 aa18.45■□□□□ 0.54
HDLBP-247ENST00000498595 PODNQ7Z5L7 613 aa18.44■□□□□ 0.54
HDLBP-247ENST00000498595 AGBL3Q8NEM8 1001 aa18.44■□□□□ 0.54
HDLBP-247ENST00000498595 MPHOSPH8Q99549 860 aa18.44■□□□□ 0.54
HDLBP-247ENST00000498595 MINPP1Q9UNW1 487 aa18.44■□□□□ 0.54
HDLBP-247ENST00000498595 KIF4BQ2VIQ3 1234 aa18.43■□□□□ 0.54
HDLBP-247ENST00000498595 RSBN1LQ6PCB5 846 aaPredicted RBP18.43■□□□□ 0.54
HDLBP-247ENST00000498595 SAPCD2Q86UD0 394 aa18.43■□□□□ 0.54
HDLBP-247ENST00000498595 HHIPL1Q96JK4 782 aa18.43■□□□□ 0.54
HDLBP-247ENST00000498595 PLA2G12BQ9BX93 195 aa18.43■□□□□ 0.54
HDLBP-247ENST00000498595 USP17L3A6NCW0 530 aa18.42■□□□□ 0.54
HDLBP-247ENST00000498595 USP17L4A6NCW7 530 aa18.42■□□□□ 0.54
HDLBP-247ENST00000498595 ITGA6P23229 1130 aa18.42■□□□□ 0.54
HDLBP-247ENST00000498595 MAP2K2P36507 400 aa18.42■□□□□ 0.54
HDLBP-247ENST00000498595 USP17L1Q7RTZ2 530 aa18.42■□□□□ 0.54
HDLBP-247ENST00000498595 SULF1Q8IWU6 871 aa18.42■□□□□ 0.54
HDLBP-247ENST00000498595 ANKRD2Q9GZV1 360 aa18.42■□□□□ 0.54
HDLBP-247ENST00000498595 MED23Q9ULK4 1368 aa18.42■□□□□ 0.54
HDLBP-247ENST00000498595 KCNJ4P48050 445 aa18.41■□□□□ 0.54
HDLBP-247ENST00000498595 CCT4P50991 539 aaKnown RBP18.41■□□□□ 0.54
HDLBP-247ENST00000498595 LEMD3Q9Y2U8 911 aa18.41■□□□□ 0.54
HDLBP-247ENST00000498595 TRPM7Q96QT4 1865 aa18.4■□□□□ 0.54
HDLBP-247ENST00000498595 ANKRD18BA2A2Z9 1011 aa18.4■□□□□ 0.54
HDLBP-247ENST00000498595 USP17L8P0C7I0 530 aa18.4■□□□□ 0.54
HDLBP-247ENST00000498595 LBX1P52954 281 aa18.4■□□□□ 0.54
HDLBP-247ENST00000498595 FAM161AQ3B820 660 aa18.4■□□□□ 0.54
HDLBP-247ENST00000498595 C2orf69Q8N8R5 385 aa18.4■□□□□ 0.54
HDLBP-247ENST00000498595 FBXW7Q969H0 707 aa18.4■□□□□ 0.54
HDLBP-247ENST00000498595 CHMP3Q9Y3E7 222 aa18.4■□□□□ 0.54
HDLBP-247ENST00000498595 EGFRP00533 1210 aa18.39■□□□□ 0.53
HDLBP-247ENST00000498595 HUNKP57058 714 aa18.39■□□□□ 0.53
HDLBP-247ENST00000498595 COA1Q9GZY4 146 aa18.39■□□□□ 0.53
HDLBP-247ENST00000498595 GGA3Q9NZ52 723 aa18.39■□□□□ 0.53
HDLBP-247ENST00000498595 F6X3S4 739 aa18.38■□□□□ 0.53
HDLBP-247ENST00000498595 CSF1RP07333 972 aa18.38■□□□□ 0.53
HDLBP-247ENST00000498595 CASP7P55210 303 aa18.38■□□□□ 0.53
HDLBP-247ENST00000498595 ZNF280AP59817 542 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms