RNA–Protein interactions for RNA: ENST00000498579.5

ECM1-207, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 943 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-207ENST00000498579 ADAMTSL1Q8N6G6 1762 aa23.94■■□□□ 1.42
ECM1-207ENST00000498579 ZNF521Q96K83 1311 aa23.94■■□□□ 1.42
ECM1-207ENST00000498579 RIMBP2O15034 1052 aa23.94■■□□□ 1.42
ECM1-207ENST00000498579 BSDC1Q9NW68 430 aaPredicted RBP23.94■■□□□ 1.42
ECM1-207ENST00000498579 H7C1D1 291 aa23.93■■□□□ 1.42
ECM1-207ENST00000498579 ECE2O60344 883 aa23.93■■□□□ 1.42
ECM1-207ENST00000498579 ATP2B4P23634 1241 aa23.93■■□□□ 1.42
ECM1-207ENST00000498579 RPS12P25398 132 aaKnown RBP23.93■■□□□ 1.42
ECM1-207ENST00000498579 DPF2Q92785 391 aa23.93■■□□□ 1.42
ECM1-207ENST00000498579 GREM2Q9H772 168 aa23.93■■□□□ 1.42
ECM1-207ENST00000498579 IGHMBP2P38935 993 aaKnown RBP23.92■■□□□ 1.42
ECM1-207ENST00000498579 ZC3H15Q8WU90 426 aaKnown RBP23.92■■□□□ 1.42
ECM1-207ENST00000498579 MKRN1Q9UHC7 482 aaKnown RBP23.91■■□□□ 1.42
ECM1-207ENST00000498579 CNOT7Q9UIV1 285 aaKnown RBP23.91■■□□□ 1.42
ECM1-207ENST00000498579 CNTNAP1P78357 1384 aa23.91■■□□□ 1.42
ECM1-207ENST00000498579 E9PSI1 815 aa23.9■■□□□ 1.42
ECM1-207ENST00000498579 PSMD14O00487 310 aa23.9■■□□□ 1.42
ECM1-207ENST00000498579 DOK7Q18PE1 504 aa23.9■■□□□ 1.42
ECM1-207ENST00000498579 LTBP1Q14766 1721 aa23.9■■□□□ 1.42
ECM1-207ENST00000498579 CASP7P55210 303 aa23.89■■□□□ 1.41
ECM1-207ENST00000498579 MICALL2Q8IY33 904 aa23.89■■□□□ 1.41
ECM1-207ENST00000498579 BEND3Q5T5X7 828 aa23.88■■□□□ 1.41
ECM1-207ENST00000498579 MPHOSPH8Q99549 860 aa23.88■■□□□ 1.41
ECM1-207ENST00000498579 MINPP1Q9UNW1 487 aa23.88■■□□□ 1.41
ECM1-207ENST00000498579 COL4A1P02462 1669 aa23.88■■□□□ 1.41
ECM1-207ENST00000498579 F6X3S4 739 aa23.87■■□□□ 1.41
ECM1-207ENST00000498579 CSF1RP07333 972 aa23.87■■□□□ 1.41
ECM1-207ENST00000498579 ITGA6P23229 1130 aa23.87■■□□□ 1.41
ECM1-207ENST00000498579 GPR101Q96P66 508 aaPredicted RBP23.87■■□□□ 1.41
ECM1-207ENST00000498579 PGAP2Q9UHJ9 254 aa23.87■■□□□ 1.41
ECM1-207ENST00000498579 ZBTB12Q9Y330 459 aaPredicted RBP23.87■■□□□ 1.41
ECM1-207ENST00000498579 TAF1P21675 1872 aa23.87■■□□□ 1.41
ECM1-207ENST00000498579 CCER2I3L3R5 266 aa23.86■■□□□ 1.41
ECM1-207ENST00000498579 ABT1Q9ULW3 272 aaKnown RBP23.86■■□□□ 1.41
ECM1-207ENST00000498579 RASSF10A6NK89 507 aa23.85■■□□□ 1.41
ECM1-207ENST00000498579 ALDH1L1O75891 902 aa23.85■■□□□ 1.41
ECM1-207ENST00000498579 VIL1P09327 827 aaKnown RBP23.85■■□□□ 1.41
ECM1-207ENST00000498579 FAM161AQ3B820 660 aa23.85■■□□□ 1.41
ECM1-207ENST00000498579 PODNQ7Z5L7 613 aa23.85■■□□□ 1.41
ECM1-207ENST00000498579 ANKRD2Q9GZV1 360 aa23.85■■□□□ 1.41
ECM1-207ENST00000498579 LEMD3Q9Y2U8 911 aa23.85■■□□□ 1.41
ECM1-207ENST00000498579 MED23Q9ULK4 1368 aa23.85■■□□□ 1.41
ECM1-207ENST00000498579 ANKRD18BA2A2Z9 1011 aa23.84■■□□□ 1.41
ECM1-207ENST00000498579 TRPM4Q8TD43 1214 aa23.84■■□□□ 1.41
ECM1-207ENST00000498579 CACNA1FO60840 1977 aa23.83■■□□□ 1.41
ECM1-207ENST00000498579 GRM8O00222 908 aa23.83■■□□□ 1.41
ECM1-207ENST00000498579 HSPA1AP0DMV8 641 aaKnown RBP23.83■■□□□ 1.41
ECM1-207ENST00000498579 HSPA1BP0DMV9 641 aaKnown RBP23.83■■□□□ 1.41
ECM1-207ENST00000498579 CCT4P50991 539 aaKnown RBP23.83■■□□□ 1.41
ECM1-207ENST00000498579 DEFB115Q30KQ5 88 aa23.83■■□□□ 1.41
ECM1-207ENST00000498579 CDC37L1Q7L3B6 337 aa23.83■■□□□ 1.41
ECM1-207ENST00000498579 AGBL3Q8NEM8 1001 aa23.83■■□□□ 1.41
ECM1-207ENST00000498579 SRCIN1Q9C0H9 1055 aa23.83■■□□□ 1.41
ECM1-207ENST00000498579 IFIT5Q13325 482 aaKnown RBP23.82■■□□□ 1.4
ECM1-207ENST00000498579 SLC4A10Q6U841 1118 aa23.82■■□□□ 1.4
ECM1-207ENST00000498579 C9orf78Q9NZ63 289 aaPredicted RBP23.82■■□□□ 1.4
ECM1-207ENST00000498579 ZNF609O15014 1411 aa23.82■■□□□ 1.4
ECM1-207ENST00000498579 HIRAP54198 1017 aaPredicted RBP23.81■■□□□ 1.4
ECM1-207ENST00000498579 RSBN1LQ6PCB5 846 aaPredicted RBP23.81■■□□□ 1.4
ECM1-207ENST00000498579 KCNQ5Q9NR82 932 aa23.81■■□□□ 1.4
ECM1-207ENST00000498579 PTPRCP08575 1304 aa23.81■■□□□ 1.4
ECM1-207ENST00000498579 VEGFBP49765 207 aa23.8■■□□□ 1.4
ECM1-207ENST00000498579 SLFN5Q08AF3 891 aa23.8■■□□□ 1.4
ECM1-207ENST00000498579 IFFO2Q5TF58 517 aa23.8■■□□□ 1.4
ECM1-207ENST00000498579 SAMD7Q7Z3H4 446 aa23.8■■□□□ 1.4
ECM1-207ENST00000498579 COA1Q9GZY4 146 aa23.8■■□□□ 1.4
ECM1-207ENST00000498579 CHMP3Q9Y3E7 222 aa23.8■■□□□ 1.4
ECM1-207ENST00000498579 SHTN1A0MZ66 631 aa23.79■■□□□ 1.4
ECM1-207ENST00000498579 USP17L3A6NCW0 530 aa23.79■■□□□ 1.4
ECM1-207ENST00000498579 USP17L4A6NCW7 530 aa23.79■■□□□ 1.4
ECM1-207ENST00000498579 TRAF5O00463 557 aa23.79■■□□□ 1.4
ECM1-207ENST00000498579 ECE1P42892 770 aa23.79■■□□□ 1.4
ECM1-207ENST00000498579 KCNJ4P48050 445 aa23.79■■□□□ 1.4
ECM1-207ENST00000498579 TBC1D10BQ4KMP7 808 aaPredicted RBP23.79■■□□□ 1.4
ECM1-207ENST00000498579 USP17L1Q7RTZ2 530 aa23.79■■□□□ 1.4
ECM1-207ENST00000498579 GLIS2Q9BZE0 524 aaPredicted RBP23.79■■□□□ 1.4
ECM1-207ENST00000498579 ZNF804BA4D1E1 1349 aa23.79■■□□□ 1.4
ECM1-207ENST00000498579 CELF2O95319 508 aaKnown RBP23.78■■□□□ 1.4
ECM1-207ENST00000498579 FOXO4P98177 505 aa23.78■■□□□ 1.4
ECM1-207ENST00000498579 CCDC57Q2TAC2 916 aa23.78■■□□□ 1.4
ECM1-207ENST00000498579 KIF4BQ2VIQ3 1234 aa23.78■■□□□ 1.4
ECM1-207ENST00000498579 CHRNDQ07001 517 aa23.77■■□□□ 1.4
ECM1-207ENST00000498579 TAF7LQ5H9L4 462 aa23.77■■□□□ 1.4
ECM1-207ENST00000498579 CST9Q5W186 159 aa23.77■■□□□ 1.4
ECM1-207ENST00000498579 MRPL50Q8N5N7 158 aaKnown RBP23.77■■□□□ 1.4
ECM1-207ENST00000498579 DCPSQ96C86 337 aaKnown RBP23.77■■□□□ 1.4
ECM1-207ENST00000498579 TLL2Q9Y6L7 1015 aa23.77■■□□□ 1.4
ECM1-207ENST00000498579 PCNTO95613 3336 aa23.76■■□□□ 1.39
ECM1-207ENST00000498579 CT47B1P0C2W7 299 aaPredicted RBP23.76■■□□□ 1.39
ECM1-207ENST00000498579 MMP14P50281 582 aa23.76■■□□□ 1.39
ECM1-207ENST00000498579 ZNF280AP59817 542 aaPredicted RBP23.76■■□□□ 1.39
ECM1-207ENST00000498579 ALDH1L2Q3SY69 923 aa23.76■■□□□ 1.39
ECM1-207ENST00000498579 LMBR1LQ6UX01 489 aa23.76■■□□□ 1.39
ECM1-207ENST00000498579 AIDAQ96BJ3 306 aa23.76■■□□□ 1.39
ECM1-207ENST00000498579 MYO3BQ8WXR4 1341 aa23.76■■□□□ 1.39
ECM1-207ENST00000498579 MYH3P11055 1940 aa23.75■■□□□ 1.39
ECM1-207ENST00000498579 FMR1Q06787 632 aaKnown RBP eCLIP23.75■■□□□ 1.39
ECM1-207ENST00000498579 RBM26Q5T8P6 1007 aaKnown RBP23.75■■□□□ 1.39
ECM1-207ENST00000498579 KRT26Q7Z3Y9 468 aa23.75■■□□□ 1.39
ECM1-207ENST00000498579 WDR33Q9C0J8 1336 aaKnown RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms