RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 IBSPP21815 317 aaPredicted RBP11.76□□□□□ -0.53
SNX13-212ENST00000498463 FCGRTP55899 365 aa11.76□□□□□ -0.53
SNX13-212ENST00000498463 RAB33AQ14088 237 aa11.76□□□□□ -0.53
SNX13-212ENST00000498463 CTC1Q2NKJ3 1217 aa11.76□□□□□ -0.53
SNX13-212ENST00000498463 ARSJQ5FYB0 599 aaPredicted RBP11.76□□□□□ -0.53
SNX13-212ENST00000498463 PRPF40BQ6NWY9 871 aaKnown RBP11.76□□□□□ -0.53
SNX13-212ENST00000498463 RHOVQ96L33 236 aa11.76□□□□□ -0.53
SNX13-212ENST00000498463 OXCT2Q9BYC2 517 aaPredicted RBP11.76□□□□□ -0.53
SNX13-212ENST00000498463 KCNQ5Q9NR82 932 aa11.76□□□□□ -0.53
SNX13-212ENST00000498463 SNTG2Q9NY99 539 aa11.76□□□□□ -0.53
SNX13-212ENST00000498463 U2SURPO15042 1029 aaKnown RBP11.75□□□□□ -0.53
SNX13-212ENST00000498463 EGFRP00533 1210 aa11.75□□□□□ -0.53
SNX13-212ENST00000498463 SNIP1Q8TAD8 396 aaKnown RBP11.75□□□□□ -0.53
SNX13-212ENST00000498463 ANKRD24Q8TF21 1146 aa11.75□□□□□ -0.53
SNX13-212ENST00000498463 HNRNPLLQ8WVV9 542 aaKnown RBP11.75□□□□□ -0.53
SNX13-212ENST00000498463 NT5C1AQ9BXI3 368 aa11.75□□□□□ -0.53
SNX13-212ENST00000498463 BRINP2Q9C0B6 783 aa11.75□□□□□ -0.53
SNX13-212ENST00000498463 POLMQ9NP87 494 aaPredicted RBP11.75□□□□□ -0.53
SNX13-212ENST00000498463 FBXO24O75426 580 aa11.74□□□□□ -0.53
SNX13-212ENST00000498463 RLBP1P12271 317 aa11.74□□□□□ -0.53
SNX13-212ENST00000498463 COL9A2Q14055 689 aaPredicted RBP11.74□□□□□ -0.53
SNX13-212ENST00000498463 RASA3Q14644 834 aa11.74□□□□□ -0.53
SNX13-212ENST00000498463 MAP3K11Q16584 847 aa11.74□□□□□ -0.53
SNX13-212ENST00000498463 PEAR1Q5VY43 1037 aaPredicted RBP11.74□□□□□ -0.53
SNX13-212ENST00000498463 SPRYD7Q5W111 196 aa11.74□□□□□ -0.53
SNX13-212ENST00000498463 FBXL19Q6PCT2 694 aa11.74□□□□□ -0.53
SNX13-212ENST00000498463 ZCRB1Q8TBF4 217 aaKnown RBP11.74□□□□□ -0.53
SNX13-212ENST00000498463 SPINT1O43278 529 aa11.73□□□□□ -0.53
SNX13-212ENST00000498463 EDN3P14138 238 aa11.73□□□□□ -0.53
SNX13-212ENST00000498463 POU4F2Q12837 409 aa11.73□□□□□ -0.53
SNX13-212ENST00000498463 FOXC1Q12948 553 aa11.73□□□□□ -0.53
SNX13-212ENST00000498463 TTC39BQ5VTQ0 682 aaPredicted RBP11.73□□□□□ -0.53
SNX13-212ENST00000498463 PHC3Q8NDX5 983 aa11.73□□□□□ -0.53
SNX13-212ENST00000498463 CEP63Q96MT8 703 aa11.73□□□□□ -0.53
SNX13-212ENST00000498463 DEPDC7Q96QD5 511 aa11.73□□□□□ -0.53
SNX13-212ENST00000498463 TSEN34Q9BSV6 310 aaKnown RBP11.73□□□□□ -0.53
SNX13-212ENST00000498463 ABCB6Q9NP58 842 aa11.73□□□□□ -0.53
SNX13-212ENST00000498463 KANSL3Q9P2N6 904 aa11.73□□□□□ -0.53
SNX13-212ENST00000498463 HCSTQ9UBK5 93 aa11.73□□□□□ -0.53
SNX13-212ENST00000498463 NOP58Q9Y2X3 529 aaKnown RBP11.73□□□□□ -0.53
SNX13-212ENST00000498463 SUPT16HQ9Y5B9 1047 aaKnown RBP11.73□□□□□ -0.53
SNX13-212ENST00000498463 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.73□□□□□ -0.53
SNX13-212ENST00000498463 J3QL48 77 aa11.72□□□□□ -0.53
SNX13-212ENST00000498463 CYP2E1P05181 493 aaPredicted RBP11.72□□□□□ -0.53
SNX13-212ENST00000498463 CTSOP43234 321 aaPredicted RBP11.72□□□□□ -0.53
SNX13-212ENST00000498463 ANAPC15P60006 121 aa11.72□□□□□ -0.53
SNX13-212ENST00000498463 FAM160A1Q05DH4 1040 aa11.72□□□□□ -0.53
SNX13-212ENST00000498463 ZNF697Q5TEC3 545 aa11.72□□□□□ -0.53
SNX13-212ENST00000498463 SV2BQ7L1I2 683 aa11.72□□□□□ -0.53
SNX13-212ENST00000498463 PKD2L1Q9P0L9 805 aa11.72□□□□□ -0.53
SNX13-212ENST00000498463 AKAP2Q9Y2D5 859 aa11.72□□□□□ -0.53
SNX13-212ENST00000498463 GARTP22102 1010 aa11.71□□□□□ -0.53
SNX13-212ENST00000498463 CPLX3Q8WVH0 158 aa11.71□□□□□ -0.53
SNX13-212ENST00000498463 ANAPC16Q96DE5 110 aa11.71□□□□□ -0.53
SNX13-212ENST00000498463 UBP1Q9NZI7 540 aa11.71□□□□□ -0.53
SNX13-212ENST00000498463 PRKAG3Q9UGI9 489 aa11.71□□□□□ -0.53
SNX13-212ENST00000498463 COL4A3BPQ9Y5P4 624 aa11.71□□□□□ -0.53
SNX13-212ENST00000498463 TMEM238LA0A1B0GVL6 79 aa11.7□□□□□ -0.54
SNX13-212ENST00000498463 A0A1W2PNR3 127 aa11.7□□□□□ -0.54
SNX13-212ENST00000498463 FAM221BA6H8Z2 402 aa11.7□□□□□ -0.54
SNX13-212ENST00000498463 GREM1O60565 184 aa11.7□□□□□ -0.54
SNX13-212ENST00000498463 MSX1P28360 303 aa11.7□□□□□ -0.54
SNX13-212ENST00000498463 LIG3P49916 1009 aa11.7□□□□□ -0.54
SNX13-212ENST00000498463 WDR44Q5JSH3 913 aa11.7□□□□□ -0.54
SNX13-212ENST00000498463 PCNX4Q63HM2 1172 aa11.7□□□□□ -0.54
SNX13-212ENST00000498463 DTHD1Q6ZMT9 781 aa11.7□□□□□ -0.54
SNX13-212ENST00000498463 NOL8Q76FK4 1167 aaKnown RBP11.7□□□□□ -0.54
SNX13-212ENST00000498463 C11orf16Q9NQ32 467 aa11.7□□□□□ -0.54
SNX13-212ENST00000498463 TLR6Q9Y2C9 796 aa11.7□□□□□ -0.54
SNX13-212ENST00000498463 A0A1B0GTH6 734 aa11.69□□□□□ -0.54
SNX13-212ENST00000498463 PRICKLE2Q7Z3G6 844 aa11.69□□□□□ -0.54
SNX13-212ENST00000498463 LRP10Q7Z4F1 713 aa11.69□□□□□ -0.54
SNX13-212ENST00000498463 FILIP1Q7Z7B0 1213 aa11.69□□□□□ -0.54
SNX13-212ENST00000498463 POLR3GLQ9BT43 218 aa11.69□□□□□ -0.54
SNX13-212ENST00000498463 IFT57Q9NWB7 429 aa11.69□□□□□ -0.54
SNX13-212ENST00000498463 PF4P02776 101 aa11.68□□□□□ -0.54
SNX13-212ENST00000498463 APOBRQ0VD83 1088 aa11.68□□□□□ -0.54
SNX13-212ENST00000498463 PLEKHG4Q58EX7 1191 aa11.68□□□□□ -0.54
SNX13-212ENST00000498463 SNAP47Q5SQN1 464 aa11.68□□□□□ -0.54
SNX13-212ENST00000498463 TPTE2Q6XPS3 522 aa11.68□□□□□ -0.54
SNX13-212ENST00000498463 LIN7BQ9HAP6 207 aa11.68□□□□□ -0.54
SNX13-212ENST00000498463 METTL14Q9HCE5 456 aaKnown RBP11.68□□□□□ -0.54
SNX13-212ENST00000498463 R3HCC1Q9Y3T6 440 aaKnown RBP11.68□□□□□ -0.54
SNX13-212ENST00000498463 GJA3Q9Y6H8 435 aa11.68□□□□□ -0.54
SNX13-212ENST00000498463 CCDC85CA6NKD9 419 aa11.67□□□□□ -0.54
SNX13-212ENST00000498463 CELA3AP09093 270 aa11.67□□□□□ -0.54
SNX13-212ENST00000498463 CRKP46108 304 aa11.67□□□□□ -0.54
SNX13-212ENST00000498463 LINC00528Q8N1L1 170 aa11.67□□□□□ -0.54
SNX13-212ENST00000498463 RNF217Q8TC41 542 aa11.67□□□□□ -0.54
SNX13-212ENST00000498463 TCF12Q99081 682 aa11.67□□□□□ -0.54
SNX13-212ENST00000498463 SRRTQ9BXP5 876 aaKnown RBP11.67□□□□□ -0.54
SNX13-212ENST00000498463 BRD7Q9NPI1 651 aa11.67□□□□□ -0.54
SNX13-212ENST00000498463 KLHL42Q9P2K6 505 aa11.67□□□□□ -0.54
SNX13-212ENST00000498463 SALL4Q9UJQ4 1053 aa11.67□□□□□ -0.54
SNX13-212ENST00000498463 TTC24A2A3L6 582 aaPredicted RBP11.66□□□□□ -0.54
SNX13-212ENST00000498463 LMNB2Q03252 620 aa11.66□□□□□ -0.54
SNX13-212ENST00000498463 CAMK2GQ13555 558 aaPredicted RBP11.66□□□□□ -0.54
SNX13-212ENST00000498463 ZNF598Q86UK7 904 aaKnown RBP11.66□□□□□ -0.54
SNX13-212ENST00000498463 GOLM1Q8NBJ4 401 aa11.66□□□□□ -0.54
SNX13-212ENST00000498463 SHDQ96IW2 340 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms